RNA–Protein interactions for RNA: ENST00000510331.1

LSM6-206, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-206ENST00000510331 KIF3CO14782 793 aa24.03■■□□□ 1.44
LSM6-206ENST00000510331 HSP90AB3PQ58FF7 597 aa24.03■■□□□ 1.44
LSM6-206ENST00000510331 OLFM4Q6UX06 510 aa24.03■■□□□ 1.44
LSM6-206ENST00000510331 NLRP10Q86W26 655 aa24.03■■□□□ 1.44
LSM6-206ENST00000510331 FAM9BQ8IZU0 186 aa24.03■■□□□ 1.44
LSM6-206ENST00000510331 PLBD2Q8NHP8 589 aa24.03■■□□□ 1.44
LSM6-206ENST00000510331 ZNF428Q96B54 188 aa24.03■■□□□ 1.44
LSM6-206ENST00000510331 UTP14AQ9BVJ6 771 aaKnown RBP24.03■■□□□ 1.44
LSM6-206ENST00000510331 TAOK3Q9H2K8 898 aa24.03■■□□□ 1.44
LSM6-206ENST00000510331 NMRK2Q9NPI5 230 aa24.03■■□□□ 1.44
LSM6-206ENST00000510331 HYPKQ9NX55 129 aa24.03■■□□□ 1.44
LSM6-206ENST00000510331 SALL2Q9Y467 1007 aaPredicted RBP24.03■■□□□ 1.44
LSM6-206ENST00000510331 TCIRG1Q13488 830 aa24.02■■□□□ 1.44
LSM6-206ENST00000510331 C7orf43Q8WVR3 580 aa24.02■■□□□ 1.44
LSM6-206ENST00000510331 LTBP3Q9NS15 1303 aa24.02■■□□□ 1.44
LSM6-206ENST00000510331 ZC3H4Q9UPT8 1303 aaKnown RBP24.01■■□□□ 1.43
LSM6-206ENST00000510331 SNED1Q8TER0 1413 aa24.01■■□□□ 1.43
LSM6-206ENST00000510331 CCDC93Q567U6 631 aa24■■□□□ 1.43
LSM6-206ENST00000510331 SOGA3Q5TF21 947 aa24■■□□□ 1.43
LSM6-206ENST00000510331 SLC51AQ86UW1 340 aa24■■□□□ 1.43
LSM6-206ENST00000510331 RPGRQ92834 1020 aaKnown RBP24■■□□□ 1.43
LSM6-206ENST00000510331 PHAXQ9H814 394 aaKnown RBP24■■□□□ 1.43
LSM6-206ENST00000510331 IL16Q14005 1332 aa24■■□□□ 1.43
LSM6-206ENST00000510331 RNF123Q5XPI4 1314 aa24■■□□□ 1.43
LSM6-206ENST00000510331 FANCIQ9NVI1 1328 aa24■■□□□ 1.43
LSM6-206ENST00000510331 NCBP3Q53F19 620 aaKnown RBP23.99■■□□□ 1.43
LSM6-206ENST00000510331 ANKRD13DQ6ZTN6 518 aa23.99■■□□□ 1.43
LSM6-206ENST00000510331 SYNE4Q8N205 404 aa23.98■■□□□ 1.43
LSM6-206ENST00000510331 ATP5J2-PTCD1G3V325 749 aa23.97■■□□□ 1.43
LSM6-206ENST00000510331 TAF1P21675 1872 aa23.97■■□□□ 1.43
LSM6-206ENST00000510331 GOLGA2Q08379 1002 aa23.97■■□□□ 1.43
LSM6-206ENST00000510331 KDM2BQ8NHM5 1336 aa23.97■■□□□ 1.43
LSM6-206ENST00000510331 TRMT112Q9UI30 125 aaKnown RBP23.97■■□□□ 1.43
LSM6-206ENST00000510331 SH3TC1Q8TE82 1336 aa23.96■■□□□ 1.43
LSM6-206ENST00000510331 HCLS1P14317 486 aaPredicted RBP23.96■■□□□ 1.43
LSM6-206ENST00000510331 ALDH1B1P30837 517 aa23.96■■□□□ 1.43
LSM6-206ENST00000510331 HOXA10P31260 410 aaPredicted RBP23.96■■□□□ 1.43
LSM6-206ENST00000510331 CCDC30Q5VVM6 783 aa23.96■■□□□ 1.43
LSM6-206ENST00000510331 ISCA1Q9BUE6 129 aa23.96■■□□□ 1.43
LSM6-206ENST00000510331 TCERG1O14776 1098 aaKnown RBP23.95■■□□□ 1.42
LSM6-206ENST00000510331 WDR90Q96KV7 1748 aa23.94■■□□□ 1.42
LSM6-206ENST00000510331 TWISTNBQ3B726 338 aaPredicted RBP23.94■■□□□ 1.42
LSM6-206ENST00000510331 SLC10A5Q5PT55 438 aa23.94■■□□□ 1.42
LSM6-206ENST00000510331 RBM17Q96I25 401 aaKnown RBP23.94■■□□□ 1.42
LSM6-206ENST00000510331 NLRP3Q96P20 1036 aa23.94■■□□□ 1.42
LSM6-206ENST00000510331 COL4A1P02462 1669 aa23.94■■□□□ 1.42
LSM6-206ENST00000510331 ABCC4O15439 1325 aa23.93■■□□□ 1.42
LSM6-206ENST00000510331 PPEF1O14829 653 aaPredicted RBP23.93■■□□□ 1.42
LSM6-206ENST00000510331 FKBP4Q02790 459 aaKnown RBP eCLIP23.93■■□□□ 1.42
LSM6-206ENST00000510331 RIC3Q7Z5B4 369 aa23.93■■□□□ 1.42
LSM6-206ENST00000510331 WDR63Q8IWG1 891 aa23.92■■□□□ 1.42
LSM6-206ENST00000510331 CRAMP1Q96RY5 1269 aa23.92■■□□□ 1.42
LSM6-206ENST00000510331 SPINK5Q9NQ38 1064 aaPredicted RBP23.92■■□□□ 1.42
LSM6-206ENST00000510331 ZNF277Q9NRM2 450 aaPredicted RBP23.92■■□□□ 1.42
LSM6-206ENST00000510331 LRRC37AA6NMS7 1700 aa23.92■■□□□ 1.42
LSM6-206ENST00000510331 COL4A5P29400 1685 aa23.92■■□□□ 1.42
LSM6-206ENST00000510331 CEP350Q5VT06 3117 aa23.91■■□□□ 1.42
LSM6-206ENST00000510331 GLTPD2A6NH11 291 aa23.9■■□□□ 1.42
LSM6-206ENST00000510331 RTKN2Q8IZC4 609 aa23.9■■□□□ 1.42
LSM6-206ENST00000510331 FAM89AQ96GI7 184 aa23.9■■□□□ 1.42
LSM6-206ENST00000510331 MYD88Q99836 296 aa23.9■■□□□ 1.42
LSM6-206ENST00000510331 STK31Q9BXU1 1019 aa23.9■■□□□ 1.42
LSM6-206ENST00000510331 RRAGCQ9HB90 399 aa23.9■■□□□ 1.42
LSM6-206ENST00000510331 CACNA1FO60840 1977 aa23.9■■□□□ 1.42
LSM6-206ENST00000510331 RTL5Q5HYW3 569 aaPredicted RBP23.89■■□□□ 1.41
LSM6-206ENST00000510331 CHMP4AQ9BY43 222 aa23.88■■□□□ 1.41
LSM6-206ENST00000510331 EXOSC9Q06265 439 aaKnown RBP23.87■■□□□ 1.41
LSM6-206ENST00000510331 TRIM28Q13263 835 aaKnown RBP23.87■■□□□ 1.41
LSM6-206ENST00000510331 G2E3Q7L622 706 aa23.87■■□□□ 1.41
LSM6-206ENST00000510331 MAP3K2Q9Y2U5 619 aa23.87■■□□□ 1.41
LSM6-206ENST00000510331 ZNF521Q96K83 1311 aa23.86■■□□□ 1.41
LSM6-206ENST00000510331 TOMM70O94826 608 aa23.86■■□□□ 1.41
LSM6-206ENST00000510331 DDX58O95786 925 aaKnown RBP23.86■■□□□ 1.41
LSM6-206ENST00000510331 PSMD1Q99460 953 aa23.86■■□□□ 1.41
LSM6-206ENST00000510331 DUOX1Q9NRD9 1551 aa23.86■■□□□ 1.41
LSM6-206ENST00000510331 ZNF541Q9H0D2 1346 aa23.85■■□□□ 1.41
LSM6-206ENST00000510331 IARSP41252 1262 aaKnown RBP23.85■■□□□ 1.41
LSM6-206ENST00000510331 CC2D2BQ6DHV5 1058 aa23.85■■□□□ 1.41
LSM6-206ENST00000510331 METTL22Q9BUU2 404 aaPredicted RBP23.85■■□□□ 1.41
LSM6-206ENST00000510331 PI4KAP2A4QPH2 592 aa23.84■■□□□ 1.41
LSM6-206ENST00000510331 C16orf71Q8IYS4 520 aaPredicted RBP23.84■■□□□ 1.41
LSM6-206ENST00000510331 PI4KAP1Q8N8J0 262 aa23.84■■□□□ 1.41
LSM6-206ENST00000510331 ATP6V0A2Q9Y487 856 aa23.84■■□□□ 1.41
LSM6-206ENST00000510331 MYH3P11055 1940 aa23.84■■□□□ 1.41
LSM6-206ENST00000510331 IRS4O14654 1257 aaPredicted RBP23.83■■□□□ 1.41
LSM6-206ENST00000510331 SLC4A2P04920 1241 aa23.83■■□□□ 1.41
LSM6-206ENST00000510331 GRAPQ13588 217 aa23.83■■□□□ 1.41
LSM6-206ENST00000510331 KSR2Q6VAB6 950 aa23.83■■□□□ 1.41
LSM6-206ENST00000510331 DDX46Q7L014 1031 aaKnown RBP23.83■■□□□ 1.41
LSM6-206ENST00000510331 ZBTB38Q8NAP3 1195 aaPredicted RBP23.83■■□□□ 1.41
LSM6-206ENST00000510331 RBM46Q8TBY0 533 aaKnown RBP23.83■■□□□ 1.41
LSM6-206ENST00000510331 GRAPLQ8TC17 118 aaPredicted RBP23.83■■□□□ 1.41
LSM6-206ENST00000510331 MYH16Q9H6N6 1097 aa23.83■■□□□ 1.41
LSM6-206ENST00000510331 LTBP1Q14766 1721 aa23.82■■□□□ 1.4
LSM6-206ENST00000510331 VAMP4O75379 141 aa23.82■■□□□ 1.4
LSM6-206ENST00000510331 DDNO94850 711 aaPredicted RBP23.82■■□□□ 1.4
LSM6-206ENST00000510331 DPY19L2Q6NUT2 758 aa23.82■■□□□ 1.4
LSM6-206ENST00000510331 CCDC191Q8NCU4 936 aa23.82■■□□□ 1.4
LSM6-206ENST00000510331 CWC25Q9NXE8 425 aaPredicted RBP23.82■■□□□ 1.4
LSM6-206ENST00000510331 POTECB2RU33 542 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms