RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 RNMTO43148 476 aaKnown RBP14.88□□□□□ -0.03
SNF8-207ENST00000509995 TNNT2P45379 298 aaPredicted RBP14.88□□□□□ -0.03
SNF8-207ENST00000509995 CDC37L1Q7L3B6 337 aa14.88□□□□□ -0.03
SNF8-207ENST00000509995 ZC3H15Q8WU90 426 aaKnown RBP14.88□□□□□ -0.03
SNF8-207ENST00000509995 CCDC102AQ96A19 550 aa14.88□□□□□ -0.03
SNF8-207ENST00000509995 CC2D2BQ6DHV5 1058 aa14.86□□□□□ -0.03
SNF8-207ENST00000509995 SULT6B1Q6IMI4 303 aa14.86□□□□□ -0.03
SNF8-207ENST00000509995 NPM2Q86SE8 214 aaKnown RBP14.86□□□□□ -0.03
SNF8-207ENST00000509995 NIM1KQ8IY84 436 aa14.86□□□□□ -0.03
SNF8-207ENST00000509995 RBBP6Q7Z6E9 1792 aaKnown RBP14.85□□□□□ -0.03
SNF8-207ENST00000509995 HIRAP54198 1017 aaPredicted RBP14.85□□□□□ -0.03
SNF8-207ENST00000509995 CDCA8Q53HL2 280 aa14.85□□□□□ -0.03
SNF8-207ENST00000509995 DZIP3Q86Y13 1208 aaKnown RBP14.85□□□□□ -0.03
SNF8-207ENST00000509995 TTC5Q8N0Z6 440 aa14.85□□□□□ -0.03
SNF8-207ENST00000509995 CSRNP1Q96S65 589 aa14.85□□□□□ -0.03
SNF8-207ENST00000509995 CDHR2Q9BYE9 1310 aa14.85□□□□□ -0.03
SNF8-207ENST00000509995 NPC1L1Q9UHC9 1359 aa14.85□□□□□ -0.03
SNF8-207ENST00000509995 HEG1Q9ULI3 1381 aa14.85□□□□□ -0.03
SNF8-207ENST00000509995 RANBP2P49792 3224 aaKnown RBP14.85□□□□□ -0.03
SNF8-207ENST00000509995 POLR2AP24928 1970 aaKnown RBP14.84□□□□□ -0.03
SNF8-207ENST00000509995 GMPSP49915 693 aaPredicted RBP14.84□□□□□ -0.03
SNF8-207ENST00000509995 ZNF157P51786 506 aaPredicted RBP14.84□□□□□ -0.03
SNF8-207ENST00000509995 CLEC4GQ6UXB4 293 aa14.84□□□□□ -0.03
SNF8-207ENST00000509995 TRPM4Q8TD43 1214 aa14.84□□□□□ -0.03
SNF8-207ENST00000509995 GBA2Q9HCG7 927 aaPredicted RBP14.84□□□□□ -0.03
SNF8-207ENST00000509995 HDAC9Q9UKV0 1011 aa14.84□□□□□ -0.03
SNF8-207ENST00000509995 CEP290O15078 2479 aa14.84□□□□□ -0.03
SNF8-207ENST00000509995 KIAA0100Q14667 2235 aaKnown RBP14.84□□□□□ -0.03
SNF8-207ENST00000509995 SLC10A3P09131 477 aa14.83□□□□□ -0.04
SNF8-207ENST00000509995 GRIPAP1Q4V328 841 aa14.83□□□□□ -0.04
SNF8-207ENST00000509995 FBXO46Q6PJ61 603 aaPredicted RBP14.83□□□□□ -0.04
SNF8-207ENST00000509995 TPTE2Q6XPS3 522 aa14.83□□□□□ -0.04
SNF8-207ENST00000509995 ZNF496Q96IT1 587 aaPredicted RBP14.83□□□□□ -0.04
SNF8-207ENST00000509995 TEX13AQ9BXU3 409 aaPredicted RBP14.83□□□□□ -0.04
SNF8-207ENST00000509995 A1BGP04217 495 aa14.82□□□□□ -0.04
SNF8-207ENST00000509995 DLK2Q6UY11 383 aa14.82□□□□□ -0.04
SNF8-207ENST00000509995 USP48Q86UV5 1035 aa14.82□□□□□ -0.04
SNF8-207ENST00000509995 SLC17A8Q8NDX2 589 aa14.82□□□□□ -0.04
SNF8-207ENST00000509995 ZNF296Q8WUU4 475 aaPredicted RBP14.82□□□□□ -0.04
SNF8-207ENST00000509995 ZNF652Q9Y2D9 606 aa14.82□□□□□ -0.04
SNF8-207ENST00000509995 SIPA1L3O60292 1781 aaPredicted RBP14.82□□□□□ -0.04
SNF8-207ENST00000509995 PAPPA2Q9BXP8 1791 aa14.82□□□□□ -0.04
SNF8-207ENST00000509995 PPIP5K2O43314 1243 aa14.81□□□□□ -0.04
SNF8-207ENST00000509995 CXCL9Q07325 125 aa14.81□□□□□ -0.04
SNF8-207ENST00000509995 CRY2Q49AN0 593 aa14.81□□□□□ -0.04
SNF8-207ENST00000509995 C2orf69Q8N8R5 385 aa14.81□□□□□ -0.04
SNF8-207ENST00000509995 COLQQ9Y215 455 aaPredicted RBP14.81□□□□□ -0.04
SNF8-207ENST00000509995 AOC3Q16853 763 aa14.8□□□□□ -0.04
SNF8-207ENST00000509995 SLC51AQ86UW1 340 aa14.8□□□□□ -0.04
SNF8-207ENST00000509995 REM2Q8IYK8 340 aaPredicted RBP14.8□□□□□ -0.04
SNF8-207ENST00000509995 RIC1Q4ADV7 1423 aa14.79□□□□□ -0.04
SNF8-207ENST00000509995 ABCC12Q96J65 1359 aa14.79□□□□□ -0.04
SNF8-207ENST00000509995 ZNRF3Q9ULT6 936 aa14.79□□□□□ -0.04
SNF8-207ENST00000509995 NIP7Q9Y221 180 aaKnown RBP eCLIP14.79□□□□□ -0.04
SNF8-207ENST00000509995 POTEFA5A3E0 1075 aa14.78□□□□□ -0.04
SNF8-207ENST00000509995 FAM177BA6PVY3 158 aa14.78□□□□□ -0.04
SNF8-207ENST00000509995 ZNF790Q6PG37 636 aa14.78□□□□□ -0.04
SNF8-207ENST00000509995 KRT26Q7Z3Y9 468 aa14.78□□□□□ -0.04
SNF8-207ENST00000509995 BCL2L13Q9BXK5 485 aa14.78□□□□□ -0.04
SNF8-207ENST00000509995 SHTN1A0MZ66 631 aa14.77□□□□□ -0.05
SNF8-207ENST00000509995 RASAL3Q86YV0 1011 aa14.77□□□□□ -0.05
SNF8-207ENST00000509995 VPS33BQ9H267 617 aa14.77□□□□□ -0.05
SNF8-207ENST00000509995 RGL2O15211 777 aa14.76□□□□□ -0.05
SNF8-207ENST00000509995 HOXA10P31260 410 aaPredicted RBP14.76□□□□□ -0.05
SNF8-207ENST00000509995 NOM1Q5C9Z4 860 aaKnown RBP14.76□□□□□ -0.05
SNF8-207ENST00000509995 CNOT7Q9UIV1 285 aaKnown RBP14.76□□□□□ -0.05
SNF8-207ENST00000509995 LAMA3Q16787 3333 aa14.76□□□□□ -0.05
SNF8-207ENST00000509995 KIF7Q2M1P5 1343 aa14.75□□□□□ -0.05
SNF8-207ENST00000509995 ADM5C9JUS6 153 aa14.75□□□□□ -0.05
SNF8-207ENST00000509995 PPEF1O14829 653 aaPredicted RBP14.75□□□□□ -0.05
SNF8-207ENST00000509995 TBC1D8O95759 1140 aa14.75□□□□□ -0.05
SNF8-207ENST00000509995 GTF2E1P29083 439 aaPredicted RBP14.75□□□□□ -0.05
SNF8-207ENST00000509995 IL13P35225 146 aa14.75□□□□□ -0.05
SNF8-207ENST00000509995 PIP4K2AP48426 406 aaPredicted RBP14.75□□□□□ -0.05
SNF8-207ENST00000509995 RPGRQ92834 1020 aaKnown RBP14.75□□□□□ -0.05
SNF8-207ENST00000509995 FMNL2Q96PY5 1086 aa14.75□□□□□ -0.05
SNF8-207ENST00000509995 H7C1D1 291 aa14.74□□□□□ -0.05
SNF8-207ENST00000509995 GPR25O00155 361 aa14.74□□□□□ -0.05
SNF8-207ENST00000509995 RAD17O75943 681 aa14.74□□□□□ -0.05
SNF8-207ENST00000509995 TNIP1Q15025 636 aa14.74□□□□□ -0.05
SNF8-207ENST00000509995 MTHFSDQ2M296 383 aaKnown RBP14.74□□□□□ -0.05
SNF8-207ENST00000509995 MICALL2Q8IY33 904 aa14.74□□□□□ -0.05
SNF8-207ENST00000509995 UNC80Q8N2C7 3258 aa14.74□□□□□ -0.05
SNF8-207ENST00000509995 TCERG1O14776 1098 aaKnown RBP14.73□□□□□ -0.05
SNF8-207ENST00000509995 INTS3Q68E01 1043 aaKnown RBP14.73□□□□□ -0.05
SNF8-207ENST00000509995 SAMD7Q7Z3H4 446 aa14.72□□□□□ -0.05
SNF8-207ENST00000509995 NUTM1Q86Y26 1132 aa14.72□□□□□ -0.05
SNF8-207ENST00000509995 CRAMP1Q96RY5 1269 aa14.72□□□□□ -0.05
SNF8-207ENST00000509995 TEFQ10587 303 aa14.71□□□□□ -0.05
SNF8-207ENST00000509995 SUPT20HQ8NEM7 779 aa14.71□□□□□ -0.05
SNF8-207ENST00000509995 DCPSQ96C86 337 aaKnown RBP14.71□□□□□ -0.05
SNF8-207ENST00000509995 RBM17Q96I25 401 aaKnown RBP14.71□□□□□ -0.05
SNF8-207ENST00000509995 RTFDC1Q9BY42 306 aaPredicted RBP14.71□□□□□ -0.05
SNF8-207ENST00000509995 NYXQ9GZU5 481 aa14.71□□□□□ -0.05
SNF8-207ENST00000509995 NUP98P52948 1817 aa14.71□□□□□ -0.06
SNF8-207ENST00000509995 FKTNO75072 461 aa14.7□□□□□ -0.06
SNF8-207ENST00000509995 EGFRP00533 1210 aa14.7□□□□□ -0.06
SNF8-207ENST00000509995 KIAA2012Q0VF49 1180 aa14.7□□□□□ -0.06
SNF8-207ENST00000509995 TBC1D10BQ4KMP7 808 aaPredicted RBP14.7□□□□□ -0.06
SNF8-207ENST00000509995 OTUD5Q96G74 571 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms