RNA–Protein interactions for RNA: ENST00000509977.1

RETREG1-205, Transcript of reticulophagy regulator 1, humanhuman

TSL 5

Gene RETREG1, Length 640 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-205ENST00000509977 EIF5P55010 431 aaKnown RBP9.54□□□□□ -0.88
RETREG1-205ENST00000509977 U2AF1Q01081 240 aaKnown RBP eCLIP9.54□□□□□ -0.88
RETREG1-205ENST00000509977 DDR1Q08345 913 aa9.54□□□□□ -0.88
RETREG1-205ENST00000509977 ZNF687Q8N1G0 1237 aa9.54□□□□□ -0.88
RETREG1-205ENST00000509977 BCL2L12Q9HB09 334 aa9.54□□□□□ -0.88
RETREG1-205ENST00000509977 SRP68Q9UHB9 627 aaKnown RBP9.54□□□□□ -0.88
RETREG1-205ENST00000509977 NARFQ9UHQ1 456 aa9.54□□□□□ -0.88
RETREG1-205ENST00000509977 POLRMTO00411 1230 aaKnown RBP9.53□□□□□ -0.88
RETREG1-205ENST00000509977 KCNA3P22001 575 aa9.53□□□□□ -0.88
RETREG1-205ENST00000509977 TEFQ10587 303 aa9.53□□□□□ -0.88
RETREG1-205ENST00000509977 CNGB1Q14028 1251 aaPredicted RBP9.53□□□□□ -0.88
RETREG1-205ENST00000509977 ANKRD31Q8N7Z5 1873 aa9.53□□□□□ -0.88
RETREG1-205ENST00000509977 TTC5Q8N0Z6 440 aa9.52□□□□□ -0.89
RETREG1-205ENST00000509977 TEX13AQ9BXU3 409 aaPredicted RBP9.52□□□□□ -0.89
RETREG1-205ENST00000509977 KCNQ3O43525 872 aa9.51□□□□□ -0.89
RETREG1-205ENST00000509977 STARD3NLO95772 234 aa9.51□□□□□ -0.89
RETREG1-205ENST00000509977 RALBP1Q15311 655 aa9.51□□□□□ -0.89
RETREG1-205ENST00000509977 USPL1Q5W0Q7 1092 aa9.51□□□□□ -0.89
RETREG1-205ENST00000509977 FMNL2Q96PY5 1086 aa9.51□□□□□ -0.89
RETREG1-205ENST00000509977 PARP3Q9Y6F1 533 aa9.51□□□□□ -0.89
RETREG1-205ENST00000509977 BTBD11A6QL63 1104 aa9.5□□□□□ -0.89
RETREG1-205ENST00000509977 IL6STP40189 918 aaPredicted RBP9.5□□□□□ -0.89
RETREG1-205ENST00000509977 NFIXQ14938 502 aa9.5□□□□□ -0.89
RETREG1-205ENST00000509977 MCM10Q7L590 875 aa9.5□□□□□ -0.89
RETREG1-205ENST00000509977 COL11A2P13942 1736 aaPredicted RBP9.5□□□□□ -0.89
RETREG1-205ENST00000509977 ARFGEF2Q9Y6D5 1785 aa9.5□□□□□ -0.89
RETREG1-205ENST00000509977 ATP10DQ9P241 1426 aa9.49□□□□□ -0.89
RETREG1-205ENST00000509977 A0A0G2JLW4 131 aa9.49□□□□□ -0.89
RETREG1-205ENST00000509977 ZPR1O75312 459 aa9.49□□□□□ -0.89
RETREG1-205ENST00000509977 DPEP1P16444 411 aa9.49□□□□□ -0.89
RETREG1-205ENST00000509977 EMILIN3Q9NT22 766 aa9.49□□□□□ -0.89
RETREG1-205ENST00000509977 SBF1O95248 1867 aa9.49□□□□□ -0.89
RETREG1-205ENST00000509977 A0A087WZG4 1122 aa9.48□□□□□ -0.89
RETREG1-205ENST00000509977 CANXP27824 592 aaKnown RBP9.48□□□□□ -0.89
RETREG1-205ENST00000509977 DCTN1Q14203 1278 aa9.48□□□□□ -0.89
RETREG1-205ENST00000509977 NFE2L2Q16236 605 aa9.48□□□□□ -0.89
RETREG1-205ENST00000509977 RTF1Q92541 710 aaKnown RBP9.48□□□□□ -0.89
RETREG1-205ENST00000509977 USP16Q9Y5T5 823 aa9.48□□□□□ -0.89
RETREG1-205ENST00000509977 MYBBP1AQ9BQG0 1328 aaKnown RBP9.48□□□□□ -0.89
RETREG1-205ENST00000509977 CARMIL3Q8ND23 1372 aa9.48□□□□□ -0.89
RETREG1-205ENST00000509977 PRAMEF22A3QJZ6 481 aa9.47□□□□□ -0.89
RETREG1-205ENST00000509977 CAMTA2O94983 1202 aa9.47□□□□□ -0.89
RETREG1-205ENST00000509977 A1BGP04217 495 aa9.47□□□□□ -0.89
RETREG1-205ENST00000509977 SNRPA1P09661 255 aaKnown RBP9.47□□□□□ -0.89
RETREG1-205ENST00000509977 MAP3K9P80192 1104 aa9.47□□□□□ -0.89
RETREG1-205ENST00000509977 TAF7Q15545 349 aaPredicted RBP9.47□□□□□ -0.89
RETREG1-205ENST00000509977 SPNS2Q8IVW8 549 aa9.47□□□□□ -0.89
RETREG1-205ENST00000509977 NBPF26B4DH59 902 aa9.46□□□□□ -0.9
RETREG1-205ENST00000509977 SERPINB2P05120 415 aa9.46□□□□□ -0.9
RETREG1-205ENST00000509977 DDX10Q13206 875 aaKnown RBP9.46□□□□□ -0.9
RETREG1-205ENST00000509977 TBC1D9BQ66K14 1250 aa9.46□□□□□ -0.9
RETREG1-205ENST00000509977 NBPF10Q6P3W6 841 aaKnown RBP9.46□□□□□ -0.9
RETREG1-205ENST00000509977 NBPF15Q8N660 670 aa9.46□□□□□ -0.9
RETREG1-205ENST00000509977 PNISRQ8TF01 805 aaKnown RBP9.46□□□□□ -0.9
RETREG1-205ENST00000509977 PNNQ9H307 717 aaKnown RBP9.46□□□□□ -0.9
RETREG1-205ENST00000509977 PIM2Q9P1W9 311 aa9.46□□□□□ -0.9
RETREG1-205ENST00000509977 NUP98P52948 1817 aa9.45□□□□□ -0.9
RETREG1-205ENST00000509977 EVI5O60447 810 aa9.45□□□□□ -0.9
RETREG1-205ENST00000509977 GIGYF1O75420 1035 aaPredicted RBP9.45□□□□□ -0.9
RETREG1-205ENST00000509977 C1QTNF8P60827 252 aa9.45□□□□□ -0.9
RETREG1-205ENST00000509977 EIF4A1P60842 406 aaKnown RBP9.45□□□□□ -0.9
RETREG1-205ENST00000509977 CAMK2BQ13554 666 aa9.45□□□□□ -0.9
RETREG1-205ENST00000509977 CLEC4GQ6UXB4 293 aa9.45□□□□□ -0.9
RETREG1-205ENST00000509977 BCS1LQ9Y276 419 aa9.45□□□□□ -0.9
RETREG1-205ENST00000509977 FER1L6Q2WGJ9 1857 aa9.45□□□□□ -0.9
RETREG1-205ENST00000509977 CHRNA5P30532 468 aa9.44□□□□□ -0.9
RETREG1-205ENST00000509977 PPP4R3BQ5MIZ7 849 aa9.44□□□□□ -0.9
RETREG1-205ENST00000509977 BABAM1Q9NWV8 329 aa9.44□□□□□ -0.9
RETREG1-205ENST00000509977 WWC3Q9ULE0 1092 aa9.44□□□□□ -0.9
RETREG1-205ENST00000509977 TBC1D2BQ9UPU7 963 aa9.44□□□□□ -0.9
RETREG1-205ENST00000509977 MAPK8IP3Q9UPT6 1336 aa9.43□□□□□ -0.9
RETREG1-205ENST00000509977 NEFMP07197 916 aa9.43□□□□□ -0.9
RETREG1-205ENST00000509977 TMPOP42166 694 aaKnown RBP9.43□□□□□ -0.9
RETREG1-205ENST00000509977 DALRD3Q5D0E6 543 aaKnown RBP9.43□□□□□ -0.9
RETREG1-205ENST00000509977 PRR5LQ6MZQ0 368 aa9.43□□□□□ -0.9
RETREG1-205ENST00000509977 LRP10Q7Z4F1 713 aa9.43□□□□□ -0.9
RETREG1-205ENST00000509977 DZIP3Q86Y13 1208 aaKnown RBP9.43□□□□□ -0.9
RETREG1-205ENST00000509977 THUMPD2Q9BTF0 503 aaKnown RBP9.43□□□□□ -0.9
RETREG1-205ENST00000509977 BRIP1Q9BX63 1249 aa9.43□□□□□ -0.9
RETREG1-205ENST00000509977 PRKRIP1Q9H875 184 aaPredicted RBP9.43□□□□□ -0.9
RETREG1-205ENST00000509977 TSHZ2Q9NRE2 1034 aa9.43□□□□□ -0.9
RETREG1-205ENST00000509977 MIS18AQ9NYP9 233 aa9.43□□□□□ -0.9
RETREG1-205ENST00000509977 PDZRN3Q9UPQ7 1066 aa9.43□□□□□ -0.9
RETREG1-205ENST00000509977 DICER1Q9UPY3 1922 aaKnown RBP9.43□□□□□ -0.9
RETREG1-205ENST00000509977 CEP350Q5VT06 3117 aa9.42□□□□□ -0.9
RETREG1-205ENST00000509977 TIAM2Q8IVF5 1701 aa9.42□□□□□ -0.9
RETREG1-205ENST00000509977 TNRC6CQ9HCJ0 1690 aaKnown RBP9.42□□□□□ -0.9
RETREG1-205ENST00000509977 RIC1Q4ADV7 1423 aa9.42□□□□□ -0.9
RETREG1-205ENST00000509977 ERBB4Q15303 1308 aa9.42□□□□□ -0.9
RETREG1-205ENST00000509977 KLRG2A4D1S0 409 aaPredicted RBP9.42□□□□□ -0.9
RETREG1-205ENST00000509977 PBX2P40425 430 aa9.42□□□□□ -0.9
RETREG1-205ENST00000509977 PIP4K2AP48426 406 aaPredicted RBP9.42□□□□□ -0.9
RETREG1-205ENST00000509977 POTEEQ6S8J3 1075 aa9.42□□□□□ -0.9
RETREG1-205ENST00000509977 WDR70Q9NW82 654 aa9.42□□□□□ -0.9
RETREG1-205ENST00000509977 SLX4Q8IY92 1834 aa9.42□□□□□ -0.9
RETREG1-205ENST00000509977 IBTKQ9P2D0 1353 aaPredicted RBP9.41□□□□□ -0.9
RETREG1-205ENST00000509977 CACNA1SQ13698 1873 aa9.41□□□□□ -0.9
RETREG1-205ENST00000509977 CCDC88AQ3V6T2 1871 aa9.41□□□□□ -0.9
RETREG1-205ENST00000509977 ZC3H4Q9UPT8 1303 aaKnown RBP9.41□□□□□ -0.9
RETREG1-205ENST00000509977 ARHGAP27Q6ZUM4 889 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms