RNA–Protein interactions for RNA: ENST00000509774.5

PTPN20-222, Transcript of protein tyrosine phosphatase, non-receptor type 20, human

TSL 1 (best) BASIC

Gene PTPN20, Length 788 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN20-222	ENST00000509774	U2SURP	O15042	1029 aa	Known RBP	13.64	□□□□□ -0.23
PTPN20-222	ENST00000509774	CAPNS2	Q96L46	248 aa		13.64	□□□□□ -0.23
PTPN20-222	ENST00000509774	COL3A1	P02461	1466 aa	Predicted RBP	13.63	□□□□□ -0.23
PTPN20-222	ENST00000509774	ABT1	Q9ULW3	272 aa	Known RBP	13.63	□□□□□ -0.23
PTPN20-222	ENST00000509774	SLX4	Q8IY92	1834 aa		13.62	□□□□□ -0.23
PTPN20-222	ENST00000509774	U2AF1L5	P0DN76	240 aa	Predicted RBP	13.62	□□□□□ -0.23
PTPN20-222	ENST00000509774	U2AF1	Q01081	240 aa	Known RBP eCLIP	13.62	□□□□□ -0.23
PTPN20-222	ENST00000509774	DGKZ	Q13574	1117 aa		13.62	□□□□□ -0.23
PTPN20-222	ENST00000509774	EAPP	Q56P03	285 aa	Predicted RBP	13.62	□□□□□ -0.23
PTPN20-222	ENST00000509774	IFNL2	Q8IZJ0	200 aa		13.62	□□□□□ -0.23
PTPN20-222	ENST00000509774	CARMIL3	Q8ND23	1372 aa		13.61	□□□□□ -0.23
PTPN20-222	ENST00000509774	RIOK3	O14730	519 aa	Known RBP	13.61	□□□□□ -0.23
PTPN20-222	ENST00000509774	HSP90AB1	P08238	724 aa	Known RBP	13.61	□□□□□ -0.23
PTPN20-222	ENST00000509774	PHKG2	P15735	406 aa		13.61	□□□□□ -0.23
PTPN20-222	ENST00000509774	CRKL	P46109	303 aa	Known RBP	13.61	□□□□□ -0.23
PTPN20-222	ENST00000509774	SOX10	P56693	466 aa		13.61	□□□□□ -0.23
PTPN20-222	ENST00000509774	C2CD5	Q86YS7	1000 aa		13.61	□□□□□ -0.23
PTPN20-222	ENST00000509774	AEBP1	Q8IUX7	1158 aa		13.61	□□□□□ -0.23
PTPN20-222	ENST00000509774	CNTROB	Q8N137	903 aa		13.61	□□□□□ -0.23
PTPN20-222	ENST00000509774	GPR101	Q96P66	508 aa	Predicted RBP	13.61	□□□□□ -0.23
PTPN20-222	ENST00000509774	LTBP3	Q9NS15	1303 aa		13.61	□□□□□ -0.23
PTPN20-222	ENST00000509774	ARFGEF2	Q9Y6D5	1785 aa		13.6	□□□□□ -0.23
PTPN20-222	ENST00000509774	NEFM	P07197	916 aa		13.6	□□□□□ -0.23
PTPN20-222	ENST00000509774	HMOX1	P09601	288 aa		13.6	□□□□□ -0.23
PTPN20-222	ENST00000509774	MAP1S	Q66K74	1059 aa	Predicted RBP	13.6	□□□□□ -0.23
PTPN20-222	ENST00000509774	CYP4F22	Q6NT55	531 aa		13.6	□□□□□ -0.23
PTPN20-222	ENST00000509774	C21orf2	O43822	256 aa		13.59	□□□□□ -0.23
PTPN20-222	ENST00000509774	ECE1	P42892	770 aa		13.59	□□□□□ -0.23
PTPN20-222	ENST00000509774	EMP3	P54852	163 aa		13.59	□□□□□ -0.23
PTPN20-222	ENST00000509774	GRM1	Q13255	1194 aa		13.59	□□□□□ -0.23
PTPN20-222	ENST00000509774	NFIX	Q14938	502 aa		13.59	□□□□□ -0.23
PTPN20-222	ENST00000509774	RNF25	Q96BH1	459 aa	Predicted RBP	13.59	□□□□□ -0.23
PTPN20-222	ENST00000509774	RSPH6A	Q9H0K4	717 aa		13.59	□□□□□ -0.23
PTPN20-222	ENST00000509774		H0YIN7	160 aa		13.58	□□□□□ -0.24
PTPN20-222	ENST00000509774	WDR43	Q15061	677 aa	Known RBP eCLIP	13.58	□□□□□ -0.24
PTPN20-222	ENST00000509774	C1orf141	Q5JVX7	400 aa		13.58	□□□□□ -0.24
PTPN20-222	ENST00000509774	USPL1	Q5W0Q7	1092 aa		13.58	□□□□□ -0.24
PTPN20-222	ENST00000509774	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.58	□□□□□ -0.24
PTPN20-222	ENST00000509774	GAS2L2	Q8NHY3	880 aa		13.58	□□□□□ -0.24
PTPN20-222	ENST00000509774	TAOK3	Q9H2K8	898 aa		13.58	□□□□□ -0.24
PTPN20-222	ENST00000509774	AOC2	O75106	756 aa		13.57	□□□□□ -0.24
PTPN20-222	ENST00000509774	FMR1	Q06787	632 aa	Known RBP eCLIP	13.57	□□□□□ -0.24
PTPN20-222	ENST00000509774	AKAP4	Q5JQC9	854 aa		13.57	□□□□□ -0.24
PTPN20-222	ENST00000509774	DIEXF	Q68CQ4	756 aa	Known RBP	13.57	□□□□□ -0.24
PTPN20-222	ENST00000509774	DDX21	Q9NR30	783 aa	Known RBP eCLIP	13.57	□□□□□ -0.24
PTPN20-222	ENST00000509774	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	13.56	□□□□□ -0.24
PTPN20-222	ENST00000509774	SERPINB2	P05120	415 aa		13.56	□□□□□ -0.24
PTPN20-222	ENST00000509774	PRKAR2B	P31323	418 aa		13.56	□□□□□ -0.24
PTPN20-222	ENST00000509774	EPHX2	P34913	555 aa		13.56	□□□□□ -0.24
PTPN20-222	ENST00000509774	ZNF530	Q6P9A1	599 aa	Predicted RBP	13.56	□□□□□ -0.24
PTPN20-222	ENST00000509774	INTS5	Q6P9B9	1019 aa	Known RBP	13.56	□□□□□ -0.24
PTPN20-222	ENST00000509774	ZFP91	Q96JP5	570 aa	Predicted RBP	13.56	□□□□□ -0.24
PTPN20-222	ENST00000509774	HACL1	Q9UJ83	578 aa		13.56	□□□□□ -0.24
PTPN20-222	ENST00000509774	ERVV-2	B6SEH9	535 aa		13.55	□□□□□ -0.24
PTPN20-222	ENST00000509774	CA12	O43570	354 aa		13.55	□□□□□ -0.24
PTPN20-222	ENST00000509774	HTATSF1	O43719	755 aa	Known RBP	13.55	□□□□□ -0.24
PTPN20-222	ENST00000509774	ZPR1	O75312	459 aa		13.55	□□□□□ -0.24
PTPN20-222	ENST00000509774	MAP2K2	P36507	400 aa		13.55	□□□□□ -0.24
PTPN20-222	ENST00000509774	MTHFSD	Q2M296	383 aa	Known RBP	13.55	□□□□□ -0.24
PTPN20-222	ENST00000509774	PLEKHF1	Q96S99	279 aa		13.55	□□□□□ -0.24
PTPN20-222	ENST00000509774	ZNF541	Q9H0D2	1346 aa		13.55	□□□□□ -0.24
PTPN20-222	ENST00000509774	CCER2	I3L3R5	266 aa		13.54	□□□□□ -0.24
PTPN20-222	ENST00000509774	PTCD1	O75127	700 aa	Known RBP	13.54	□□□□□ -0.24
PTPN20-222	ENST00000509774	ZNF622	Q969S3	477 aa	Known RBP eCLIP	13.54	□□□□□ -0.24
PTPN20-222	ENST00000509774	MRS2	Q9HD23	443 aa		13.54	□□□□□ -0.24
PTPN20-222	ENST00000509774	PNMA8A	Q86V59	439 aa	Predicted RBP	13.53	□□□□□ -0.24
PTPN20-222	ENST00000509774	PNISR	Q8TF01	805 aa	Known RBP	13.53	□□□□□ -0.24
PTPN20-222	ENST00000509774	PHACTR3	Q96KR7	559 aa		13.53	□□□□□ -0.24
PTPN20-222	ENST00000509774	BCL2L12	Q9HB09	334 aa		13.53	□□□□□ -0.24
PTPN20-222	ENST00000509774	ADAMTS8	Q9UP79	889 aa		13.53	□□□□□ -0.24
PTPN20-222	ENST00000509774	GNAT3	A8MTJ3	354 aa		13.52	□□□□□ -0.25
PTPN20-222	ENST00000509774	CST9	Q5W186	159 aa		13.52	□□□□□ -0.25
PTPN20-222	ENST00000509774	RUNDC1	Q96C34	613 aa		13.52	□□□□□ -0.25
PTPN20-222	ENST00000509774	TLL2	Q9Y6L7	1015 aa		13.52	□□□□□ -0.25
PTPN20-222	ENST00000509774	SOS1	Q07889	1333 aa	Predicted RBP	13.52	□□□□□ -0.25
PTPN20-222	ENST00000509774	RNF123	Q5XPI4	1314 aa		13.52	□□□□□ -0.25
PTPN20-222	ENST00000509774	MAPK8IP3	Q9UPT6	1336 aa		13.52	□□□□□ -0.25
PTPN20-222	ENST00000509774	HABP4	Q5JVS0	413 aa	Known RBP	13.51	□□□□□ -0.25
PTPN20-222	ENST00000509774	GCC1	Q96CN9	775 aa		13.51	□□□□□ -0.25
PTPN20-222	ENST00000509774	NARF	Q9UHQ1	456 aa		13.51	□□□□□ -0.25
PTPN20-222	ENST00000509774	BRPF1	P55201	1214 aa	Predicted RBP	13.5	□□□□□ -0.25
PTPN20-222	ENST00000509774	NFE2L2	Q16236	605 aa		13.5	□□□□□ -0.25
PTPN20-222	ENST00000509774	RTF1	Q92541	710 aa	Known RBP	13.5	□□□□□ -0.25
PTPN20-222	ENST00000509774	RNMT	O43148	476 aa	Known RBP	13.49	□□□□□ -0.25
PTPN20-222	ENST00000509774	CCDC184	Q52MB2	194 aa		13.49	□□□□□ -0.25
PTPN20-222	ENST00000509774	AKAP11	Q9UKA4	1901 aa		13.49	□□□□□ -0.25
PTPN20-222	ENST00000509774	BCOR	Q6W2J9	1755 aa		13.48	□□□□□ -0.25
PTPN20-222	ENST00000509774	SCN11A	Q9UI33	1791 aa		13.48	□□□□□ -0.25
PTPN20-222	ENST00000509774	COL15A1	P39059	1388 aa		13.48	□□□□□ -0.25
PTPN20-222	ENST00000509774	FAM205C	A6NFA0	338 aa		13.48	□□□□□ -0.25
PTPN20-222	ENST00000509774	TRAF5	O00463	557 aa		13.48	□□□□□ -0.25
PTPN20-222	ENST00000509774	HOXB3	P14651	431 aa	Predicted RBP	13.48	□□□□□ -0.25
PTPN20-222	ENST00000509774	CABP4	P57796	275 aa		13.48	□□□□□ -0.25
PTPN20-222	ENST00000509774	LMOD3	Q0VAK6	560 aa		13.48	□□□□□ -0.25
PTPN20-222	ENST00000509774	CIAPIN1	Q6FI81	312 aa		13.48	□□□□□ -0.25
PTPN20-222	ENST00000509774	PDE6B	P35913	854 aa		13.47	□□□□□ -0.25
PTPN20-222	ENST00000509774	TMPO	P42166	694 aa	Known RBP	13.47	□□□□□ -0.25
PTPN20-222	ENST00000509774	PRPF40B	Q6NWY9	871 aa	Known RBP	13.47	□□□□□ -0.25
PTPN20-222	ENST00000509774	MICALL2	Q8IY33	904 aa		13.47	□□□□□ -0.25
PTPN20-222	ENST00000509774	ZNF710	Q8N1W2	664 aa		13.47	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms