RNA–Protein interactions for RNA: ENST00000509602.1

CAST-227, Transcript of calpastatin, humanhuman

TSL 4

Gene CAST, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-227ENST00000509602 C21orf2O43822 256 aa9.5□□□□□ -0.89
CAST-227ENST00000509602 RTN1Q16799 776 aa9.5□□□□□ -0.89
CAST-227ENST00000509602 NACC1Q96RE7 527 aa9.5□□□□□ -0.89
CAST-227ENST00000509602 UBE2OQ9C0C9 1292 aaKnown RBP9.5□□□□□ -0.89
CAST-227ENST00000509602 VRTNQ9H8Y1 702 aa9.5□□□□□ -0.89
CAST-227ENST00000509602 GATA4P43694 442 aa9.49□□□□□ -0.89
CAST-227ENST00000509602 DPYDQ12882 1025 aa9.49□□□□□ -0.89
CAST-227ENST00000509602 TRIM28Q13263 835 aaKnown RBP9.49□□□□□ -0.89
CAST-227ENST00000509602 PRDM6Q9NQX0 595 aa9.49□□□□□ -0.89
CAST-227ENST00000509602 FAM196BA6NMK8 535 aa9.48□□□□□ -0.89
CAST-227ENST00000509602 USP17L15C9J2P7 530 aa9.48□□□□□ -0.89
CAST-227ENST00000509602 USP17L10C9JJH3 530 aa9.48□□□□□ -0.89
CAST-227ENST00000509602 USP17L13C9JLJ4 530 aa9.48□□□□□ -0.89
CAST-227ENST00000509602 USP17L12C9JPN9 530 aa9.48□□□□□ -0.89
CAST-227ENST00000509602 USP17L11C9JVI0 530 aa9.48□□□□□ -0.89
CAST-227ENST00000509602 USP17L21D6R901 530 aa9.48□□□□□ -0.89
CAST-227ENST00000509602 USP17L18D6R9N7 530 aa9.48□□□□□ -0.89
CAST-227ENST00000509602 USP17L22D6RA61 530 aa9.48□□□□□ -0.89
CAST-227ENST00000509602 USP17L17D6RBQ6 530 aa9.48□□□□□ -0.89
CAST-227ENST00000509602 USP17L19D6RCP7 530 aa9.48□□□□□ -0.89
CAST-227ENST00000509602 USP17L20D6RJB6 530 aa9.48□□□□□ -0.89
CAST-227ENST00000509602 LILRB5O75023 590 aa9.48□□□□□ -0.89
CAST-227ENST00000509602 LMOD1P29536 600 aaPredicted RBP9.48□□□□□ -0.89
CAST-227ENST00000509602 USP17L24Q0WX57 530 aa9.48□□□□□ -0.89
CAST-227ENST00000509602 IER5Q5VY09 327 aa9.48□□□□□ -0.89
CAST-227ENST00000509602 ANKMY2Q8IV38 441 aa9.48□□□□□ -0.89
CAST-227ENST00000509602 IGFLR1Q9H665 355 aa9.48□□□□□ -0.89
CAST-227ENST00000509602 DKK1O94907 266 aa9.47□□□□□ -0.89
CAST-227ENST00000509602 IGFBP4P22692 258 aa9.47□□□□□ -0.89
CAST-227ENST00000509602 PTK7Q13308 1070 aa9.47□□□□□ -0.89
CAST-227ENST00000509602 CRTC2Q53ET0 693 aaPredicted RBP9.47□□□□□ -0.89
CAST-227ENST00000509602 MDFIQ99750 246 aa9.47□□□□□ -0.89
CAST-227ENST00000509602 TGFBR3LH3BV60 316 aa9.46□□□□□ -0.9
CAST-227ENST00000509602 ALBP02768 609 aa9.46□□□□□ -0.9
CAST-227ENST00000509602 MICALL1Q8N3F8 863 aa9.46□□□□□ -0.9
CAST-227ENST00000509602 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.46□□□□□ -0.9
CAST-227ENST00000509602 PCSK7Q16549 785 aa9.45□□□□□ -0.9
CAST-227ENST00000509602 TRAPPC3LQ5T215 181 aa9.45□□□□□ -0.9
CAST-227ENST00000509602 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.44□□□□□ -0.9
CAST-227ENST00000509602 RAC1P63000 192 aa9.43□□□□□ -0.9
CAST-227ENST00000509602 CCINQ13939 588 aa9.43□□□□□ -0.9
CAST-227ENST00000509602 DOC2BQ14184 412 aa9.43□□□□□ -0.9
CAST-227ENST00000509602 KANK4Q5T7N3 995 aaPredicted RBP9.43□□□□□ -0.9
CAST-227ENST00000509602 JPH1Q9HDC5 661 aaPredicted RBP9.43□□□□□ -0.9
CAST-227ENST00000509602 SLC6A14Q9UN76 642 aa9.43□□□□□ -0.9
CAST-227ENST00000509602 STARD13Q9Y3M8 1113 aa9.43□□□□□ -0.9
CAST-227ENST00000509602 FOXO3O43524 673 aa9.42□□□□□ -0.9
CAST-227ENST00000509602 ARID4AP29374 1257 aaPredicted RBP9.42□□□□□ -0.9
CAST-227ENST00000509602 LGR5O75473 907 aa9.41□□□□□ -0.9
CAST-227ENST00000509602 NFKB1P19838 968 aa9.41□□□□□ -0.9
CAST-227ENST00000509602 RFX1P22670 979 aa9.41□□□□□ -0.9
CAST-227ENST00000509602 FAM200AQ8TCP9 573 aa9.41□□□□□ -0.9
CAST-227ENST00000509602 FAM229AH3BQW9 127 aa9.4□□□□□ -0.9
CAST-227ENST00000509602 NID1P14543 1247 aa9.4□□□□□ -0.9
CAST-227ENST00000509602 C8orf86Q6ZUL3 223 aa9.4□□□□□ -0.9
CAST-227ENST00000509602 SEMA6BQ9H3T3 888 aa9.4□□□□□ -0.9
CAST-227ENST00000509602 DNAJB12Q9NXW2 375 aaKnown RBP9.4□□□□□ -0.9
CAST-227ENST00000509602 RGS9O75916 674 aaPredicted RBP9.39□□□□□ -0.91
CAST-227ENST00000509602 IDH3AP50213 366 aa9.39□□□□□ -0.91
CAST-227ENST00000509602 ARSDP51689 593 aa9.39□□□□□ -0.91
CAST-227ENST00000509602 DGKZQ13574 1117 aa9.39□□□□□ -0.91
CAST-227ENST00000509602 NUDT8Q8WV74 236 aa9.39□□□□□ -0.91
CAST-227ENST00000509602 GSX2Q9BZM3 304 aa9.39□□□□□ -0.91
CAST-227ENST00000509602 C9orf172C9J069 976 aa9.38□□□□□ -0.91
CAST-227ENST00000509602 PSAPL1Q6NUJ1 521 aa9.38□□□□□ -0.91
CAST-227ENST00000509602 C20orf204Q6ZNR8 217 aa9.38□□□□□ -0.91
CAST-227ENST00000509602 KLK14Q9P0G3 267 aa9.38□□□□□ -0.91
CAST-227ENST00000509602 ELNP15502 786 aa9.37□□□□□ -0.91
CAST-227ENST00000509602 NRG1Q02297 640 aaPredicted RBP9.36□□□□□ -0.91
CAST-227ENST00000509602 COL9A3Q14050 684 aaPredicted RBP9.36□□□□□ -0.91
CAST-227ENST00000509602 GRIK4Q16099 956 aa9.36□□□□□ -0.91
CAST-227ENST00000509602 C11orf91Q3C1V1 193 aa9.36□□□□□ -0.91
CAST-227ENST00000509602 FAM35AQ86V20 835 aa9.36□□□□□ -0.91
CAST-227ENST00000509602 C11orf16Q9NQ32 467 aa9.36□□□□□ -0.91
CAST-227ENST00000509602 ZNF777Q9ULD5 760 aaPredicted RBP9.36□□□□□ -0.91
CAST-227ENST00000509602 WEE1P30291 646 aa9.35□□□□□ -0.91
CAST-227ENST00000509602 INPP5BP32019 993 aa9.35□□□□□ -0.91
CAST-227ENST00000509602 KRT25Q7Z3Z0 450 aa9.35□□□□□ -0.91
CAST-227ENST00000509602 BCS1LQ9Y276 419 aa9.35□□□□□ -0.91
CAST-227ENST00000509602 A0A0A0MRY4 1105 aa9.34□□□□□ -0.91
CAST-227ENST00000509602 MICAL2O94851 1124 aa9.34□□□□□ -0.91
CAST-227ENST00000509602 MAP3K6O95382 1288 aa9.34□□□□□ -0.91
CAST-227ENST00000509602 RARAP10276 462 aa9.34□□□□□ -0.91
CAST-227ENST00000509602 ELMSAN1Q6PJG2 1045 aa9.34□□□□□ -0.91
CAST-227ENST00000509602 ARXQ96QS3 562 aa9.34□□□□□ -0.91
CAST-227ENST00000509602 QTRT2Q9H974 415 aaKnown RBP9.34□□□□□ -0.91
CAST-227ENST00000509602 DMGDHQ9UI17 866 aaKnown RBP9.34□□□□□ -0.91
CAST-227ENST00000509602 NOVA2Q9UNW9 492 aaKnown RBP9.34□□□□□ -0.91
CAST-227ENST00000509602 CPB1P15086 417 aa9.33□□□□□ -0.92
CAST-227ENST00000509602 CFAP70Q5T0N1 1121 aa9.33□□□□□ -0.92
CAST-227ENST00000509602 MYO19Q96H55 970 aa9.33□□□□□ -0.92
CAST-227ENST00000509602 USP21Q9UK80 565 aa9.33□□□□□ -0.92
CAST-227ENST00000509602 AFF1P51825 1210 aaKnown RBP9.32□□□□□ -0.92
CAST-227ENST00000509602 XP32Q5T750 250 aa9.32□□□□□ -0.92
CAST-227ENST00000509602 DHX32Q7L7V1 743 aaKnown RBP9.32□□□□□ -0.92
CAST-227ENST00000509602 Q8N3U1 123 aa9.32□□□□□ -0.92
CAST-227ENST00000509602 TPSG1Q9NRR2 321 aa9.32□□□□□ -0.92
CAST-227ENST00000509602 FRRS1LQ9P0K9 344 aa9.32□□□□□ -0.92
CAST-227ENST00000509602 SWI5Q1ZZU3 235 aa9.31□□□□□ -0.92
CAST-227ENST00000509602 CDCA8Q53HL2 280 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms