RNA–Protein interactions for RNA: ENST00000509490.5

PDGFRA-208, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,991 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-208ENST00000509490 NECTIN2Q92692 538 aa11.03□□□□□ -0.64
PDGFRA-208ENST00000509490 GRM8O00222 908 aa11.03□□□□□ -0.64
PDGFRA-208ENST00000509490 LARGE1O95461 756 aa11.03□□□□□ -0.64
PDGFRA-208ENST00000509490 ZKSCAN1P17029 563 aaPredicted RBP11.03□□□□□ -0.64
PDGFRA-208ENST00000509490 TEFQ10587 303 aa11.03□□□□□ -0.64
PDGFRA-208ENST00000509490 CREB3L3Q68CJ9 461 aa11.03□□□□□ -0.64
PDGFRA-208ENST00000509490 R3HCC1Q9Y3T6 440 aaKnown RBP11.03□□□□□ -0.64
PDGFRA-208ENST00000509490 MYH15Q9Y2K3 1946 aa11.03□□□□□ -0.64
PDGFRA-208ENST00000509490 SPEF2Q9C093 1822 aa11.02□□□□□ -0.64
PDGFRA-208ENST00000509490 SASH1O94885 1247 aa11.02□□□□□ -0.64
PDGFRA-208ENST00000509490 CEBPAP49715 358 aaPredicted RBP11.02□□□□□ -0.64
PDGFRA-208ENST00000509490 PDIA6Q15084 440 aa11.02□□□□□ -0.64
PDGFRA-208ENST00000509490 ZNF530Q6P9A1 599 aaPredicted RBP11.02□□□□□ -0.64
PDGFRA-208ENST00000509490 MAP3K2Q9Y2U5 619 aa11.02□□□□□ -0.64
PDGFRA-208ENST00000509490 COL18A1P39060 1754 aa11.02□□□□□ -0.65
PDGFRA-208ENST00000509490 UQCRHLA0A096LP55 91 aa11.02□□□□□ -0.65
PDGFRA-208ENST00000509490 KCNQ3O43525 872 aa11.02□□□□□ -0.65
PDGFRA-208ENST00000509490 UQCRHP07919 91 aa11.02□□□□□ -0.65
PDGFRA-208ENST00000509490 SLC27A2O14975 620 aa11.01□□□□□ -0.65
PDGFRA-208ENST00000509490 ADCY5O95622 1261 aa11.01□□□□□ -0.65
PDGFRA-208ENST00000509490 DDX58O95786 925 aaKnown RBP11.01□□□□□ -0.65
PDGFRA-208ENST00000509490 IFIT2P09913 472 aaKnown RBP11.01□□□□□ -0.65
PDGFRA-208ENST00000509490 ME3Q16798 604 aa11.01□□□□□ -0.65
PDGFRA-208ENST00000509490 ADCK5Q3MIX3 580 aa11.01□□□□□ -0.65
PDGFRA-208ENST00000509490 FOXD4L5Q5VV16 416 aaPredicted RBP11.01□□□□□ -0.65
PDGFRA-208ENST00000509490 RNF214Q8ND24 703 aa11.01□□□□□ -0.65
PDGFRA-208ENST00000509490 FOXD4L4Q8WXT5 416 aaPredicted RBP11.01□□□□□ -0.65
PDGFRA-208ENST00000509490 JAKMIP1Q96N16 626 aaKnown RBP11.01□□□□□ -0.65
PDGFRA-208ENST00000509490 RBM8AQ9Y5S9 174 aaKnown RBP11.01□□□□□ -0.65
PDGFRA-208ENST00000509490 CAVIN2O95810 425 aa11.01□□□□□ -0.65
PDGFRA-208ENST00000509490 RNF20Q5VTR2 975 aa11.01□□□□□ -0.65
PDGFRA-208ENST00000509490 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.01□□□□□ -0.65
PDGFRA-208ENST00000509490 SPG7Q9UQ90 795 aa11.01□□□□□ -0.65
PDGFRA-208ENST00000509490 RPS6KB1P23443 525 aa11.01□□□□□ -0.65
PDGFRA-208ENST00000509490 KRT32Q14532 448 aa11.01□□□□□ -0.65
PDGFRA-208ENST00000509490 GDPD2Q9HCC8 539 aa11.01□□□□□ -0.65
PDGFRA-208ENST00000509490 COPRSQ9NQ92 184 aa11.01□□□□□ -0.65
PDGFRA-208ENST00000509490 ARFGEF2Q9Y6D5 1785 aa11□□□□□ -0.65
PDGFRA-208ENST00000509490 EIF2S2P20042 333 aaKnown RBP11□□□□□ -0.65
PDGFRA-208ENST00000509490 PRPF40BQ6NWY9 871 aaKnown RBP11□□□□□ -0.65
PDGFRA-208ENST00000509490 TPCN1Q9ULQ1 816 aa11□□□□□ -0.65
PDGFRA-208ENST00000509490 MAP4K4O95819 1239 aaPredicted RBP11□□□□□ -0.65
PDGFRA-208ENST00000509490 KRT85P78386 507 aa11□□□□□ -0.65
PDGFRA-208ENST00000509490 NOLC1Q14978 699 aaKnown RBP eCLIP11□□□□□ -0.65
PDGFRA-208ENST00000509490 RABL6Q3YEC7 729 aaPredicted RBP11□□□□□ -0.65
PDGFRA-208ENST00000509490 USHBP1Q8N6Y0 703 aa11□□□□□ -0.65
PDGFRA-208ENST00000509490 EAF2Q96CJ1 260 aaPredicted RBP11□□□□□ -0.65
PDGFRA-208ENST00000509490 SUCLG2Q96I99 432 aa11□□□□□ -0.65
PDGFRA-208ENST00000509490 SCAND2PQ9GZW5 306 aaPredicted RBP11□□□□□ -0.65
PDGFRA-208ENST00000509490 C9orf78Q9NZ63 289 aaPredicted RBP11□□□□□ -0.65
PDGFRA-208ENST00000509490 ADAMTSL3P82987 1691 aa11□□□□□ -0.65
PDGFRA-208ENST00000509490 CCDC192P0DO97 292 aa10.99□□□□□ -0.65
PDGFRA-208ENST00000509490 ATP5JP18859 108 aa10.99□□□□□ -0.65
PDGFRA-208ENST00000509490 C1orf141Q5JVX7 400 aa10.99□□□□□ -0.65
PDGFRA-208ENST00000509490 LARP1Q6PKG0 1096 aaKnown RBP10.99□□□□□ -0.65
PDGFRA-208ENST00000509490 LRP10Q7Z4F1 713 aa10.99□□□□□ -0.65
PDGFRA-208ENST00000509490 CCDC83Q8IWF9 413 aa10.99□□□□□ -0.65
PDGFRA-208ENST00000509490 RGS22Q8NE09 1264 aa10.99□□□□□ -0.65
PDGFRA-208ENST00000509490 DNM1Q05193 864 aaKnown RBP10.99□□□□□ -0.65
PDGFRA-208ENST00000509490 NMIQ13287 307 aaPredicted RBP10.99□□□□□ -0.65
PDGFRA-208ENST00000509490 NOL8Q76FK4 1167 aaKnown RBP10.99□□□□□ -0.65
PDGFRA-208ENST00000509490 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.99□□□□□ -0.65
PDGFRA-208ENST00000509490 AACSQ86V21 672 aa10.99□□□□□ -0.65
PDGFRA-208ENST00000509490 KIAA1524Q8TCG1 905 aa10.99□□□□□ -0.65
PDGFRA-208ENST00000509490 FAM200AQ8TCP9 573 aa10.99□□□□□ -0.65
PDGFRA-208ENST00000509490 DDX19AQ9NUU7 478 aaKnown RBP10.99□□□□□ -0.65
PDGFRA-208ENST00000509490 NPHP3Q7Z494 1330 aa10.99□□□□□ -0.65
PDGFRA-208ENST00000509490 HCLS1P14317 486 aaPredicted RBP10.98□□□□□ -0.65
PDGFRA-208ENST00000509490 KDM6AO15550 1401 aaPredicted RBP10.98□□□□□ -0.65
PDGFRA-208ENST00000509490 IGKV5-2P06315 115 aa10.98□□□□□ -0.65
PDGFRA-208ENST00000509490 PTMAP06454 111 aaKnown RBP10.98□□□□□ -0.65
PDGFRA-208ENST00000509490 RFX5P48382 616 aaPredicted RBP10.98□□□□□ -0.65
PDGFRA-208ENST00000509490 G3BP1Q13283 466 aaKnown RBP eCLIP10.98□□□□□ -0.65
PDGFRA-208ENST00000509490 OS9Q13438 667 aaPredicted RBP10.98□□□□□ -0.65
PDGFRA-208ENST00000509490 TOB2Q14106 344 aaPredicted RBP10.98□□□□□ -0.65
PDGFRA-208ENST00000509490 PROSER3Q2NL68 480 aa10.98□□□□□ -0.65
PDGFRA-208ENST00000509490 LTV1Q96GA3 475 aaPredicted RBP10.98□□□□□ -0.65
PDGFRA-208ENST00000509490 DDX60Q8IY21 1712 aaKnown RBP10.98□□□□□ -0.65
PDGFRA-208ENST00000509490 NUP188Q5SRE5 1749 aa10.98□□□□□ -0.65
PDGFRA-208ENST00000509490 GCP02774 474 aa10.98□□□□□ -0.65
PDGFRA-208ENST00000509490 TTC6Q86TZ1 520 aa10.98□□□□□ -0.65
PDGFRA-208ENST00000509490 LLPHQ9BRT6 129 aaKnown RBP10.98□□□□□ -0.65
PDGFRA-208ENST00000509490 BICC1Q9H694 974 aaKnown RBP10.98□□□□□ -0.65
PDGFRA-208ENST00000509490 AFDNP55196 1824 aaKnown RBP10.97□□□□□ -0.65
PDGFRA-208ENST00000509490 RGPD5Q99666 1765 aa10.97□□□□□ -0.65
PDGFRA-208ENST00000509490 TAF5LO75529 589 aa10.97□□□□□ -0.65
PDGFRA-208ENST00000509490 ATL3Q6DD88 541 aa10.97□□□□□ -0.65
PDGFRA-208ENST00000509490 BLOC1S2Q6QNY1 142 aa10.97□□□□□ -0.65
PDGFRA-208ENST00000509490 FBXL16Q8N461 479 aa10.97□□□□□ -0.65
PDGFRA-208ENST00000509490 METTL22Q9BUU2 404 aaPredicted RBP10.97□□□□□ -0.65
PDGFRA-208ENST00000509490 UBR2Q8IWV8 1755 aa10.97□□□□□ -0.65
PDGFRA-208ENST00000509490 PALLDQ8WX93 1383 aa10.97□□□□□ -0.65
PDGFRA-208ENST00000509490 NEURL1BA8MQ27 555 aa10.97□□□□□ -0.65
PDGFRA-208ENST00000509490 GOLGA6L6A8MZA4 724 aa10.97□□□□□ -0.65
PDGFRA-208ENST00000509490 NPM3O75607 178 aaKnown RBP10.97□□□□□ -0.65
PDGFRA-208ENST00000509490 CDC25BP30305 580 aa10.97□□□□□ -0.65
PDGFRA-208ENST00000509490 NUTM2GQ5VZR2 741 aa10.97□□□□□ -0.65
PDGFRA-208ENST00000509490 TDRD7Q8NHU6 1098 aaKnown RBP10.97□□□□□ -0.65
PDGFRA-208ENST00000509490 SMARCC2Q8TAQ2 1214 aa10.97□□□□□ -0.65
PDGFRA-208ENST00000509490 AGXT2Q9BYV1 514 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms