RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 FOXO4P98177 505 aa18.1■□□□□ 0.49
PHF3-209ENST00000509330 KIF6Q6ZMV9 814 aa18.1■□□□□ 0.49
PHF3-209ENST00000509330 TTC41PQ6P2S7 1318 aa18.1■□□□□ 0.49
PHF3-209ENST00000509330 COL14A1Q05707 1796 aaKnown RBP18.1■□□□□ 0.49
PHF3-209ENST00000509330 SPATA31A1Q5TZJ5 1347 aa18.09■□□□□ 0.49
PHF3-209ENST00000509330 H7C1W4 665 aa18.09■□□□□ 0.49
PHF3-209ENST00000509330 CHGBP05060 677 aa18.09■□□□□ 0.49
PHF3-209ENST00000509330 NEUROD6Q96NK8 337 aa18.09■□□□□ 0.49
PHF3-209ENST00000509330 LAMB4A4D0S4 1761 aa18.09■□□□□ 0.49
PHF3-209ENST00000509330 AHDC1Q5TGY3 1603 aaPredicted RBP18.09■□□□□ 0.49
PHF3-209ENST00000509330 FAM98CQ17RN3 349 aaKnown RBP18.09■□□□□ 0.49
PHF3-209ENST00000509330 DBNLQ9UJU6 430 aaKnown RBP18.09■□□□□ 0.49
PHF3-209ENST00000509330 LRRC24Q50LG9 513 aa18.08■□□□□ 0.49
PHF3-209ENST00000509330 FAM227BQ96M60 508 aa18.08■□□□□ 0.49
PHF3-209ENST00000509330 DNAJC2Q99543 621 aaKnown RBP18.08■□□□□ 0.49
PHF3-209ENST00000509330 DBNDD2Q9BQY9 259 aa18.08■□□□□ 0.49
PHF3-209ENST00000509330 LARP6Q9BRS8 491 aaKnown RBP18.08■□□□□ 0.49
PHF3-209ENST00000509330 PHLPP1O60346 1717 aa18.08■□□□□ 0.48
PHF3-209ENST00000509330 ST18O60284 1047 aa18.08■□□□□ 0.48
PHF3-209ENST00000509330 MCCP23508 829 aa18.08■□□□□ 0.48
PHF3-209ENST00000509330 KCNQ4P56696 695 aa18.08■□□□□ 0.48
PHF3-209ENST00000509330 RABL6Q3YEC7 729 aaPredicted RBP18.08■□□□□ 0.48
PHF3-209ENST00000509330 MARCH10Q8NA82 808 aaPredicted RBP18.08■□□□□ 0.48
PHF3-209ENST00000509330 COPRSQ9NQ92 184 aa18.08■□□□□ 0.48
PHF3-209ENST00000509330 UBR2Q8IWV8 1755 aa18.08■□□□□ 0.48
PHF3-209ENST00000509330 BCL9O00512 1426 aa18.08■□□□□ 0.48
PHF3-209ENST00000509330 SGSM2O43147 1006 aa18.07■□□□□ 0.48
PHF3-209ENST00000509330 PUS3Q9BZE2 481 aaKnown RBP18.07■□□□□ 0.48
PHF3-209ENST00000509330 KCNQ2O43526 872 aa18.07■□□□□ 0.48
PHF3-209ENST00000509330 TNNI3KQ59H18 835 aa18.07■□□□□ 0.48
PHF3-209ENST00000509330 ZGPATQ8N5A5 531 aaKnown RBP18.07■□□□□ 0.48
PHF3-209ENST00000509330 FSD1Q9BTV5 496 aa18.07■□□□□ 0.48
PHF3-209ENST00000509330 FPGT-TNNI3KV9GXZ4 949 aa18.07■□□□□ 0.48
PHF3-209ENST00000509330 EIF5BO60841 1220 aaKnown RBP18.06■□□□□ 0.48
PHF3-209ENST00000509330 CYP19A1P11511 503 aaPredicted RBP18.06■□□□□ 0.48
PHF3-209ENST00000509330 TIMM10P62072 90 aa18.06■□□□□ 0.48
PHF3-209ENST00000509330 TCIRG1Q13488 830 aa18.06■□□□□ 0.48
PHF3-209ENST00000509330 CCDC191Q8NCU4 936 aa18.06■□□□□ 0.48
PHF3-209ENST00000509330 NGLY1Q96IV0 654 aa18.06■□□□□ 0.48
PHF3-209ENST00000509330 TUBGCP6Q96RT7 1819 aa18.06■□□□□ 0.48
PHF3-209ENST00000509330 DTNBO60941 627 aa18.06■□□□□ 0.48
PHF3-209ENST00000509330 FAM182BQ5T319 152 aa18.06■□□□□ 0.48
PHF3-209ENST00000509330 KIAA1211Q6ZU35 1233 aa18.06■□□□□ 0.48
PHF3-209ENST00000509330 CPA1P15085 419 aa18.05■□□□□ 0.48
PHF3-209ENST00000509330 USP42Q9H9J4 1324 aaKnown RBP18.05■□□□□ 0.48
PHF3-209ENST00000509330 PTH1RQ03431 593 aa18.05■□□□□ 0.48
PHF3-209ENST00000509330 FOXD4L5Q5VV16 416 aaPredicted RBP18.05■□□□□ 0.48
PHF3-209ENST00000509330 FOXD4L4Q8WXT5 416 aaPredicted RBP18.05■□□□□ 0.48
PHF3-209ENST00000509330 PAPPAQ13219 1627 aa18.04■□□□□ 0.48
PHF3-209ENST00000509330 GZF1Q9H116 711 aaPredicted RBP18.04■□□□□ 0.48
PHF3-209ENST00000509330 ATP6V1AP38606 617 aa18.04■□□□□ 0.48
PHF3-209ENST00000509330 NMIQ13287 307 aaPredicted RBP18.04■□□□□ 0.48
PHF3-209ENST00000509330 PKP1Q13835 747 aa18.04■□□□□ 0.48
PHF3-209ENST00000509330 TNPO1Q92973 898 aaKnown RBP18.04■□□□□ 0.48
PHF3-209ENST00000509330 TEX13AQ9BXU3 409 aaPredicted RBP18.04■□□□□ 0.48
PHF3-209ENST00000509330 SSFA2P28290 1259 aa18.03■□□□□ 0.48
PHF3-209ENST00000509330 RASEFQ8IZ41 740 aa18.03■□□□□ 0.48
PHF3-209ENST00000509330 EVI5LQ96CN4 794 aa18.03■□□□□ 0.48
PHF3-209ENST00000509330 ISCA1Q9BUE6 129 aa18.03■□□□□ 0.48
PHF3-209ENST00000509330 ITGB4P16144 1822 aa18.03■□□□□ 0.48
PHF3-209ENST00000509330 SLFNL1Q499Z3 407 aa18.03■□□□□ 0.48
PHF3-209ENST00000509330 SMIM5Q71RC9 77 aa18.03■□□□□ 0.48
PHF3-209ENST00000509330 DDX46Q7L014 1031 aaKnown RBP18.03■□□□□ 0.48
PHF3-209ENST00000509330 VSIG10Q8N0Z9 540 aa18.03■□□□□ 0.48
PHF3-209ENST00000509330 LSG1Q9H089 658 aaKnown RBP18.03■□□□□ 0.48
PHF3-209ENST00000509330 DDIT3P35638 169 aa18.03■□□□□ 0.48
PHF3-209ENST00000509330 AK9Q5TCS8 1911 aa18.02■□□□□ 0.48
PHF3-209ENST00000509330 MAP3K15Q6ZN16 1313 aa18.02■□□□□ 0.48
PHF3-209ENST00000509330 A0A0D9SFI3 127 aa18.02■□□□□ 0.48
PHF3-209ENST00000509330 MCM4P33991 863 aa18.02■□□□□ 0.48
PHF3-209ENST00000509330 ATG9AQ7Z3C6 839 aa18.02■□□□□ 0.48
PHF3-209ENST00000509330 DZIP3Q86Y13 1208 aaKnown RBP18.02■□□□□ 0.48
PHF3-209ENST00000509330 SPATA31A5Q5VU36 1347 aa18.02■□□□□ 0.47
PHF3-209ENST00000509330 SPATA31A7Q8IWB4 1347 aa18.02■□□□□ 0.47
PHF3-209ENST00000509330 PLCH1Q4KWH8 1693 aa18.02■□□□□ 0.47
PHF3-209ENST00000509330 KCNJ4P48050 445 aa18.02■□□□□ 0.47
PHF3-209ENST00000509330 TAF7LQ5H9L4 462 aa18.02■□□□□ 0.47
PHF3-209ENST00000509330 PRPF40BQ6NWY9 871 aaKnown RBP18.02■□□□□ 0.47
PHF3-209ENST00000509330 RAD50Q92878 1312 aa18.01■□□□□ 0.47
PHF3-209ENST00000509330 CCDC57Q2TAC2 916 aa18.01■□□□□ 0.47
PHF3-209ENST00000509330 GSE1Q14687 1217 aa18.01■□□□□ 0.47
PHF3-209ENST00000509330 GIGYF2Q6Y7W6 1299 aaKnown RBP18.01■□□□□ 0.47
PHF3-209ENST00000509330 PTF1AQ7RTS3 328 aa18.01■□□□□ 0.47
PHF3-209ENST00000509330 HSPA4P34932 840 aa18■□□□□ 0.47
PHF3-209ENST00000509330 COL22A1Q8NFW1 1626 aaPredicted RBP18■□□□□ 0.47
PHF3-209ENST00000509330 TRMT112Q9UI30 125 aaKnown RBP18■□□□□ 0.47
PHF3-209ENST00000509330 SNX14Q9Y5W7 946 aa18■□□□□ 0.47
PHF3-209ENST00000509330 TMX3Q96JJ7 454 aa18■□□□□ 0.47
PHF3-209ENST00000509330 CHAMP1Q96JM3 812 aa18■□□□□ 0.47
PHF3-209ENST00000509330 NLRP10Q86W26 655 aa17.99■□□□□ 0.47
PHF3-209ENST00000509330 NUP188Q5SRE5 1749 aa17.99■□□□□ 0.47
PHF3-209ENST00000509330 ITPK1Q13572 414 aa17.99■□□□□ 0.47
PHF3-209ENST00000509330 CCDC129Q6ZRS4 1044 aa17.99■□□□□ 0.47
PHF3-209ENST00000509330 ZNF589Q86UQ0 364 aaPredicted RBP17.99■□□□□ 0.47
PHF3-209ENST00000509330 SEC62Q99442 399 aaKnown RBP17.99■□□□□ 0.47
PHF3-209ENST00000509330 LOC102724428A0A0B4J2F2 783 aa17.98■□□□□ 0.47
PHF3-209ENST00000509330 EYA2O00167 538 aa17.98■□□□□ 0.47
PHF3-209ENST00000509330 SIK1P57059 783 aa17.98■□□□□ 0.47
PHF3-209ENST00000509330 RUFY2Q8WXA3 655 aa17.98■□□□□ 0.47
PHF3-209ENST00000509330 DOT1LQ8TEK3 1739 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms