RNA–Protein interactions for RNA: ENST00000509328.1

HOXC6-204, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-204ENST00000509328 TRIM28Q13263 835 aaKnown RBP25.79■■□□□ 1.72
HOXC6-204ENST00000509328 FKBP5Q13451 457 aaPredicted RBP25.79■■□□□ 1.72
HOXC6-204ENST00000509328 ERFEQ4G0M1 354 aa25.79■■□□□ 1.72
HOXC6-204ENST00000509328 NUTM1Q86Y26 1132 aa25.79■■□□□ 1.72
HOXC6-204ENST00000509328 METTL22Q9BUU2 404 aaPredicted RBP25.79■■□□□ 1.72
HOXC6-204ENST00000509328 PIM2Q9P1W9 311 aa25.79■■□□□ 1.72
HOXC6-204ENST00000509328 ARFGEF1Q9Y6D6 1849 aa25.79■■□□□ 1.72
HOXC6-204ENST00000509328 MYD88Q99836 296 aa25.78■■□□□ 1.72
HOXC6-204ENST00000509328 RIC1Q4ADV7 1423 aa25.78■■□□□ 1.72
HOXC6-204ENST00000509328 TNRC6CQ9HCJ0 1690 aaKnown RBP25.77■■□□□ 1.72
HOXC6-204ENST00000509328 YBX3P16989 372 aaKnown RBP eCLIP25.77■■□□□ 1.72
HOXC6-204ENST00000509328 WWC3Q9ULE0 1092 aa25.77■■□□□ 1.72
HOXC6-204ENST00000509328 ABCC12Q96J65 1359 aa25.77■■□□□ 1.72
HOXC6-204ENST00000509328 ALDH1L2Q3SY69 923 aa25.76■■□□□ 1.71
HOXC6-204ENST00000509328 TRMT112Q9UI30 125 aaKnown RBP25.76■■□□□ 1.71
HOXC6-204ENST00000509328 KLRG2A4D1S0 409 aaPredicted RBP25.75■■□□□ 1.71
HOXC6-204ENST00000509328 NEXNQ0ZGT2 675 aa25.75■■□□□ 1.71
HOXC6-204ENST00000509328 MRPL50Q8N5N7 158 aaKnown RBP25.75■■□□□ 1.71
HOXC6-204ENST00000509328 SSH1Q8WYL5 1049 aa25.75■■□□□ 1.71
HOXC6-204ENST00000509328 CACNA1SQ13698 1873 aa25.74■■□□□ 1.71
HOXC6-204ENST00000509328 SH3TC1Q8TE82 1336 aa25.74■■□□□ 1.71
HOXC6-204ENST00000509328 GRIN3BO60391 1043 aa25.74■■□□□ 1.71
HOXC6-204ENST00000509328 SLC10A5Q5PT55 438 aa25.74■■□□□ 1.71
HOXC6-204ENST00000509328 CCDC191Q8NCU4 936 aa25.74■■□□□ 1.71
HOXC6-204ENST00000509328 BCS1LQ9Y276 419 aa25.74■■□□□ 1.71
HOXC6-204ENST00000509328 LAMB2P55268 1798 aa25.74■■□□□ 1.71
HOXC6-204ENST00000509328 SRGNP10124 158 aa25.73■■□□□ 1.71
HOXC6-204ENST00000509328 DALRD3Q5D0E6 543 aaKnown RBP25.73■■□□□ 1.71
HOXC6-204ENST00000509328 DNAAF4Q8WXU2 420 aa25.73■■□□□ 1.71
HOXC6-204ENST00000509328 DDX60Q8IY21 1712 aaKnown RBP25.73■■□□□ 1.71
HOXC6-204ENST00000509328 CHD4Q14839 1912 aa25.73■■□□□ 1.71
HOXC6-204ENST00000509328 STYK1Q6J9G0 422 aa25.72■■□□□ 1.71
HOXC6-204ENST00000509328 ZNF622Q969S3 477 aaKnown RBP eCLIP25.72■■□□□ 1.71
HOXC6-204ENST00000509328 MASTLQ96GX5 879 aa25.72■■□□□ 1.71
HOXC6-204ENST00000509328 CWC25Q9NXE8 425 aaPredicted RBP25.72■■□□□ 1.71
HOXC6-204ENST00000509328 GOLGB1Q14789 3259 aaKnown RBP25.71■■□□□ 1.71
HOXC6-204ENST00000509328 TTLL6Q8N841 843 aa25.71■■□□□ 1.71
HOXC6-204ENST00000509328 SMC4Q9NTJ3 1288 aa25.71■■□□□ 1.71
HOXC6-204ENST00000509328 IGKV5-2P06315 115 aa25.7■■□□□ 1.7
HOXC6-204ENST00000509328 NPR1P16066 1061 aa25.7■■□□□ 1.7
HOXC6-204ENST00000509328 CRY2Q49AN0 593 aa25.7■■□□□ 1.7
HOXC6-204ENST00000509328 NLRP3Q96P20 1036 aa25.7■■□□□ 1.7
HOXC6-204ENST00000509328 BCL2L13Q9BXK5 485 aa25.7■■□□□ 1.7
HOXC6-204ENST00000509328 ZBTB38Q8NAP3 1195 aaPredicted RBP25.69■■□□□ 1.7
HOXC6-204ENST00000509328 CNKSR1Q969H4 720 aa25.69■■□□□ 1.7
HOXC6-204ENST00000509328 FAM89AQ96GI7 184 aa25.69■■□□□ 1.7
HOXC6-204ENST00000509328 PTPRCP08575 1304 aa25.68■■□□□ 1.7
HOXC6-204ENST00000509328 SLX4Q8IY92 1834 aa25.68■■□□□ 1.7
HOXC6-204ENST00000509328 NEURL1BA8MQ27 555 aa25.68■■□□□ 1.7
HOXC6-204ENST00000509328 SYNE4Q8N205 404 aa25.68■■□□□ 1.7
HOXC6-204ENST00000509328 F6X3S4 739 aa25.67■■□□□ 1.7
HOXC6-204ENST00000509328 PCCAP05165 728 aaPredicted RBP25.67■■□□□ 1.7
HOXC6-204ENST00000509328 HCLS1P14317 486 aaPredicted RBP25.67■■□□□ 1.7
HOXC6-204ENST00000509328 RARSP54136 660 aaKnown RBP25.67■■□□□ 1.7
HOXC6-204ENST00000509328 CWF19L2Q2TBE0 894 aaKnown RBP25.67■■□□□ 1.7
HOXC6-204ENST00000509328 LINS1Q8NG48 757 aa25.67■■□□□ 1.7
HOXC6-204ENST00000509328 BRPF1P55201 1214 aaPredicted RBP25.66■■□□□ 1.7
HOXC6-204ENST00000509328 RPGRQ92834 1020 aaKnown RBP25.66■■□□□ 1.7
HOXC6-204ENST00000509328 RTL5Q5HYW3 569 aaPredicted RBP25.65■■□□□ 1.7
HOXC6-204ENST00000509328 C3orf67Q6ZVT6 689 aa25.65■■□□□ 1.7
HOXC6-204ENST00000509328 IRS4O14654 1257 aaPredicted RBP25.64■■□□□ 1.7
HOXC6-204ENST00000509328 HSP90B1P14625 803 aaKnown RBP25.64■■□□□ 1.7
HOXC6-204ENST00000509328 HOXA10P31260 410 aaPredicted RBP25.64■■□□□ 1.7
HOXC6-204ENST00000509328 MYH3P11055 1940 aa25.64■■□□□ 1.69
HOXC6-204ENST00000509328 ALDH1B1P30837 517 aa25.63■■□□□ 1.69
HOXC6-204ENST00000509328 GCKRQ14397 625 aa25.63■■□□□ 1.69
HOXC6-204ENST00000509328 BEND3Q5T5X7 828 aa25.63■■□□□ 1.69
HOXC6-204ENST00000509328 PRPF40BQ6NWY9 871 aaKnown RBP25.63■■□□□ 1.69
HOXC6-204ENST00000509328 RBM17Q96I25 401 aaKnown RBP25.63■■□□□ 1.69
HOXC6-204ENST00000509328 SLC4A10Q6U841 1118 aa25.62■■□□□ 1.69
HOXC6-204ENST00000509328 CDHR2Q9BYE9 1310 aa25.62■■□□□ 1.69
HOXC6-204ENST00000509328 CRAMP1Q96RY5 1269 aa25.61■■□□□ 1.69
HOXC6-204ENST00000509328 UTRNP46939 3433 aa25.61■■□□□ 1.69
HOXC6-204ENST00000509328 ARHGAP27Q6ZUM4 889 aa25.6■■□□□ 1.69
HOXC6-204ENST00000509328 JARID2Q92833 1246 aaPredicted RBP25.6■■□□□ 1.69
HOXC6-204ENST00000509328 NOB1Q9ULX3 412 aaKnown RBP25.6■■□□□ 1.69
HOXC6-204ENST00000509328 H7C1W4 665 aa25.59■■□□□ 1.69
HOXC6-204ENST00000509328 ALDH1L1O75891 902 aa25.59■■□□□ 1.69
HOXC6-204ENST00000509328 SF3B3Q15393 1217 aaKnown RBP25.59■■□□□ 1.69
HOXC6-204ENST00000509328 SRCIN1Q9C0H9 1055 aa25.59■■□□□ 1.69
HOXC6-204ENST00000509328 TAF1P21675 1872 aa25.59■■□□□ 1.69
HOXC6-204ENST00000509328 FER1L6Q2WGJ9 1857 aa25.59■■□□□ 1.69
HOXC6-204ENST00000509328 KIF16BQ96L93 1317 aa25.59■■□□□ 1.69
HOXC6-204ENST00000509328 C21orf2O43822 256 aa25.58■■□□□ 1.69
HOXC6-204ENST00000509328 PDE8AO60658 829 aa25.58■■□□□ 1.69
HOXC6-204ENST00000509328 SOGA3Q5TF21 947 aa25.57■■□□□ 1.68
HOXC6-204ENST00000509328 UBE3BQ7Z3V4 1068 aa25.57■■□□□ 1.68
HOXC6-204ENST00000509328 ZNF219Q9P2Y4 722 aaPredicted RBP25.57■■□□□ 1.68
HOXC6-204ENST00000509328 SBF1O95248 1867 aa25.57■■□□□ 1.68
HOXC6-204ENST00000509328 DDX46Q7L014 1031 aaKnown RBP25.56■■□□□ 1.68
HOXC6-204ENST00000509328 C7orf43Q8WVR3 580 aa25.56■■□□□ 1.68
HOXC6-204ENST00000509328 API5Q9BZZ5 524 aaKnown RBP25.56■■□□□ 1.68
HOXC6-204ENST00000509328 BCAR3O75815 825 aa25.55■■□□□ 1.68
HOXC6-204ENST00000509328 ARHGAP45Q92619 1136 aa25.55■■□□□ 1.68
HOXC6-204ENST00000509328 ABCC4O15439 1325 aa25.55■■□□□ 1.68
HOXC6-204ENST00000509328 CCDC88AQ3V6T2 1871 aa25.55■■□□□ 1.68
HOXC6-204ENST00000509328 CASP7P55210 303 aa25.54■■□□□ 1.68
HOXC6-204ENST00000509328 IPO8O15397 1037 aaKnown RBP25.53■■□□□ 1.68
HOXC6-204ENST00000509328 GRM8O00222 908 aa25.52■■□□□ 1.68
HOXC6-204ENST00000509328 GRAPQ13588 217 aa25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms