RNA–Protein interactions for RNA: ENST00000509013.2

SSBP2-211, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5

Gene SSBP2, Length 709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-211ENST00000509013 ABT1Q9ULW3 272 aaKnown RBP8.08□□□□□ -1.12
SSBP2-211ENST00000509013 KLRG2A4D1S0 409 aaPredicted RBP8.07□□□□□ -1.12
SSBP2-211ENST00000509013 CCDC85CA6NKD9 419 aa8.07□□□□□ -1.12
SSBP2-211ENST00000509013 BTBD11A6QL63 1104 aa8.07□□□□□ -1.12
SSBP2-211ENST00000509013 FZD9O00144 591 aa8.07□□□□□ -1.12
SSBP2-211ENST00000509013 ALDH1B1P30837 517 aa8.07□□□□□ -1.12
SSBP2-211ENST00000509013 PIP4K2AP48426 406 aaPredicted RBP8.07□□□□□ -1.12
SSBP2-211ENST00000509013 AMER1Q5JTC6 1135 aaPredicted RBP8.07□□□□□ -1.12
SSBP2-211ENST00000509013 OLFM4Q6UX06 510 aa8.07□□□□□ -1.12
SSBP2-211ENST00000509013 CLEC4GQ6UXB4 293 aa8.07□□□□□ -1.12
SSBP2-211ENST00000509013 TPTE2Q6XPS3 522 aa8.07□□□□□ -1.12
SSBP2-211ENST00000509013 PAXIP1Q6ZW49 1069 aaPredicted RBP8.07□□□□□ -1.12
SSBP2-211ENST00000509013 GPC2Q8N158 579 aa8.07□□□□□ -1.12
SSBP2-211ENST00000509013 SYNE4Q8N205 404 aa8.07□□□□□ -1.12
SSBP2-211ENST00000509013 GAS2L2Q8NHY3 880 aa8.07□□□□□ -1.12
SSBP2-211ENST00000509013 BEGAINQ9BUH8 593 aa8.07□□□□□ -1.12
SSBP2-211ENST00000509013 METRNQ9UJH8 293 aa8.07□□□□□ -1.12
SSBP2-211ENST00000509013 ZNF652Q9Y2D9 606 aa8.07□□□□□ -1.12
SSBP2-211ENST00000509013 FAM177BA6PVY3 158 aa8.06□□□□□ -1.12
SSBP2-211ENST00000509013 U2SURPO15042 1029 aaKnown RBP8.06□□□□□ -1.12
SSBP2-211ENST00000509013 KCNQ3O43525 872 aa8.06□□□□□ -1.12
SSBP2-211ENST00000509013 IARSP41252 1262 aaKnown RBP8.06□□□□□ -1.12
SSBP2-211ENST00000509013 MLLT1Q03111 559 aaPredicted RBP8.06□□□□□ -1.12
SSBP2-211ENST00000509013 ASTLQ6HA08 431 aaPredicted RBP8.06□□□□□ -1.12
SSBP2-211ENST00000509013 JDP2Q8WYK2 163 aa8.06□□□□□ -1.12
SSBP2-211ENST00000509013 MS4A3Q96HJ5 214 aa8.06□□□□□ -1.12
SSBP2-211ENST00000509013 DDX21Q9NR30 783 aaKnown RBP eCLIP8.06□□□□□ -1.12
SSBP2-211ENST00000509013 USP16Q9Y5T5 823 aa8.06□□□□□ -1.12
SSBP2-211ENST00000509013 FER1L6Q2WGJ9 1857 aa8.05□□□□□ -1.12
SSBP2-211ENST00000509013 GTF2E1P29083 439 aaPredicted RBP8.05□□□□□ -1.12
SSBP2-211ENST00000509013 LMOD1P29536 600 aaPredicted RBP8.05□□□□□ -1.12
SSBP2-211ENST00000509013 EIF6P56537 245 aaKnown RBP8.05□□□□□ -1.12
SSBP2-211ENST00000509013 GRM1Q13255 1194 aa8.05□□□□□ -1.12
SSBP2-211ENST00000509013 CNGB1Q14028 1251 aaPredicted RBP8.05□□□□□ -1.12
SSBP2-211ENST00000509013 GPR101Q96P66 508 aaPredicted RBP8.05□□□□□ -1.12
SSBP2-211ENST00000509013 NIP7Q9Y221 180 aaKnown RBP eCLIP8.05□□□□□ -1.12
SSBP2-211ENST00000509013 GJA3Q9Y6H8 435 aa8.05□□□□□ -1.12
SSBP2-211ENST00000509013 COL11A2P13942 1736 aaPredicted RBP8.05□□□□□ -1.12
SSBP2-211ENST00000509013 CCDC88AQ3V6T2 1871 aa8.04□□□□□ -1.12
SSBP2-211ENST00000509013 ANKRD31Q8N7Z5 1873 aa8.04□□□□□ -1.12
SSBP2-211ENST00000509013 PRAMEF22A3QJZ6 481 aa8.04□□□□□ -1.12
SSBP2-211ENST00000509013 ATMINO43313 823 aaPredicted RBP8.04□□□□□ -1.12
SSBP2-211ENST00000509013 SNRPA1P09661 255 aaKnown RBP8.04□□□□□ -1.12
SSBP2-211ENST00000509013 ECE1P42892 770 aa8.04□□□□□ -1.12
SSBP2-211ENST00000509013 RGS19P49795 217 aa8.04□□□□□ -1.12
SSBP2-211ENST00000509013 FMR1Q06787 632 aaKnown RBP eCLIP8.04□□□□□ -1.121e-6■■□□□ 13.4
SSBP2-211ENST00000509013 CC2D1BQ5T0F9 858 aaKnown RBP8.04□□□□□ -1.12
SSBP2-211ENST00000509013 CYP4F22Q6NT55 531 aa8.04□□□□□ -1.12
SSBP2-211ENST00000509013 CAPNS2Q96L46 248 aa8.04□□□□□ -1.12
SSBP2-211ENST00000509013 PSMD1Q99460 953 aa8.04□□□□□ -1.12
SSBP2-211ENST00000509013 SCN7AQ01118 1682 aa8.04□□□□□ -1.12
SSBP2-211ENST00000509013 SLX4Q8IY92 1834 aa8.03□□□□□ -1.12
SSBP2-211ENST00000509013 UBR2Q8IWV8 1755 aa8.03□□□□□ -1.12
SSBP2-211ENST00000509013 CEMIPQ8WUJ3 1361 aa8.03□□□□□ -1.12
SSBP2-211ENST00000509013 EPS15P42566 896 aa8.03□□□□□ -1.12
SSBP2-211ENST00000509013 USP50Q70EL3 339 aaPredicted RBP8.03□□□□□ -1.12
SSBP2-211ENST00000509013 SLC39A7Q92504 469 aa8.03□□□□□ -1.12
SSBP2-211ENST00000509013 CFAP44Q96MT7 982 aa8.03□□□□□ -1.12
SSBP2-211ENST00000509013 PRKRIP1Q9H875 184 aaPredicted RBP8.03□□□□□ -1.12
SSBP2-211ENST00000509013 PCDH10Q9P2E7 1040 aa8.03□□□□□ -1.12
SSBP2-211ENST00000509013 DICER1Q9UPY3 1922 aaKnown RBP8.03□□□□□ -1.12
SSBP2-211ENST00000509013 SCN4AP35499 1836 aa8.03□□□□□ -1.12
SSBP2-211ENST00000509013 RGL2O15211 777 aa8.02□□□□□ -1.13
SSBP2-211ENST00000509013 AOC2O75106 756 aa8.02□□□□□ -1.13
SSBP2-211ENST00000509013 C7P10643 843 aa8.02□□□□□ -1.13
SSBP2-211ENST00000509013 MAP2K2P36507 400 aa8.02□□□□□ -1.13
SSBP2-211ENST00000509013 HNRNPUQ00839 825 aaKnown RBP eCLIP8.02□□□□□ -1.13
SSBP2-211ENST00000509013 CST9Q5W186 159 aa8.02□□□□□ -1.13
SSBP2-211ENST00000509013 CC2D2BQ6DHV5 1058 aa8.02□□□□□ -1.13
SSBP2-211ENST00000509013 LARGE2Q8N3Y3 721 aa8.02□□□□□ -1.13
SSBP2-211ENST00000509013 PHACTR3Q96KR7 559 aa8.02□□□□□ -1.13
SSBP2-211ENST00000509013 MRS2Q9HD23 443 aa8.02□□□□□ -1.13
SSBP2-211ENST00000509013 TSKSQ9UJT2 592 aa8.02□□□□□ -1.13
SSBP2-211ENST00000509013 TLL2Q9Y6L7 1015 aa8.02□□□□□ -1.13
SSBP2-211ENST00000509013 ADAMTSL1Q8N6G6 1762 aa8.02□□□□□ -1.13
SSBP2-211ENST00000509013 NBPF26B4DH59 902 aa8.01□□□□□ -1.13
SSBP2-211ENST00000509013 TRAF5O00463 557 aa8.01□□□□□ -1.13
SSBP2-211ENST00000509013 PER1O15534 1290 aaPredicted RBP8.01□□□□□ -1.13
SSBP2-211ENST00000509013 PRKAR2BP31323 418 aa8.01□□□□□ -1.13
SSBP2-211ENST00000509013 SCNN1DP51172 638 aa8.01□□□□□ -1.13
SSBP2-211ENST00000509013 HLFQ16534 295 aa8.01□□□□□ -1.13
SSBP2-211ENST00000509013 NBPF10Q6P3W6 841 aaKnown RBP8.01□□□□□ -1.13
SSBP2-211ENST00000509013 NUTM1Q86Y26 1132 aa8.01□□□□□ -1.13
SSBP2-211ENST00000509013 NBPF15Q8N660 670 aa8.01□□□□□ -1.13
SSBP2-211ENST00000509013 RTF1Q92541 710 aaKnown RBP8.01□□□□□ -1.13
SSBP2-211ENST00000509013 RPGRQ92834 1020 aaKnown RBP8.01□□□□□ -1.13
SSBP2-211ENST00000509013 MCOLN1Q9GZU1 580 aa8.01□□□□□ -1.13
SSBP2-211ENST00000509013 NYXQ9GZU5 481 aa8.01□□□□□ -1.13
SSBP2-211ENST00000509013 TCERG1O14776 1098 aaKnown RBP8□□□□□ -1.13
SSBP2-211ENST00000509013 CA12O43570 354 aa8□□□□□ -1.13
SSBP2-211ENST00000509013 CELF2O95319 508 aaKnown RBP8□□□□□ -1.13
SSBP2-211ENST00000509013 NEFLP07196 543 aa8□□□□□ -1.13
SSBP2-211ENST00000509013 CRY2Q49AN0 593 aa8□□□□□ -1.13
SSBP2-211ENST00000509013 GRIPAP1Q4V328 841 aa8□□□□□ -1.13
SSBP2-211ENST00000509013 CCDC184Q52MB2 194 aa8□□□□□ -1.13
SSBP2-211ENST00000509013 MCM10Q7L590 875 aa8□□□□□ -1.13
SSBP2-211ENST00000509013 NIM1KQ8IY84 436 aa8□□□□□ -1.13
SSBP2-211ENST00000509013 FAM9BQ8IZU0 186 aa8□□□□□ -1.13
SSBP2-211ENST00000509013 RBM17Q96I25 401 aaKnown RBP8□□□□□ -1.13
SSBP2-211ENST00000509013 ADARB2Q9NS39 739 aaKnown RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 152 ms