RNA–Protein interactions for RNA: ENST00000508472.5

DDR1-264, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 836 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-264ENST00000508472 UTP14AQ9BVJ6 771 aaKnown RBP20.28■□□□□ 0.84
DDR1-264ENST00000508472 DBF4Q9UBU7 674 aaPredicted RBP20.28■□□□□ 0.84
DDR1-264ENST00000508472 UBN2Q6ZU65 1347 aa20.27■□□□□ 0.84
DDR1-264ENST00000508472 ANKRD36CQ5JPF3 1778 aa20.27■□□□□ 0.84
DDR1-264ENST00000508472 FKBP4Q02790 459 aaKnown RBP eCLIP20.27■□□□□ 0.84
DDR1-264ENST00000508472 AIMP1Q12904 312 aaKnown RBP20.27■□□□□ 0.84
DDR1-264ENST00000508472 LRP10Q7Z4F1 713 aa20.27■□□□□ 0.84
DDR1-264ENST00000508472 SMC1BQ8NDV3 1235 aa20.27■□□□□ 0.84
DDR1-264ENST00000508472 NLRP3Q96P20 1036 aa20.27■□□□□ 0.84
DDR1-264ENST00000508472 ABCC12Q96J65 1359 aa20.26■□□□□ 0.83
DDR1-264ENST00000508472 NTSR2O95665 410 aa20.26■□□□□ 0.83
DDR1-264ENST00000508472 PROSER3Q2NL68 480 aa20.26■□□□□ 0.83
DDR1-264ENST00000508472 XAGE3Q8WTP9 111 aa20.26■□□□□ 0.83
DDR1-264ENST00000508472 IFT57Q9NWB7 429 aa20.26■□□□□ 0.83
DDR1-264ENST00000508472 CEP350Q5VT06 3117 aa20.25■□□□□ 0.83
DDR1-264ENST00000508472 ANXA1P04083 346 aa20.25■□□□□ 0.83
DDR1-264ENST00000508472 HOXA10P31260 410 aaPredicted RBP20.25■□□□□ 0.83
DDR1-264ENST00000508472 HYPKQ9NX55 129 aa20.25■□□□□ 0.83
DDR1-264ENST00000508472 CHPF2Q9P2E5 772 aa20.25■□□□□ 0.83
DDR1-264ENST00000508472 WDR90Q96KV7 1748 aa20.24■□□□□ 0.83
DDR1-264ENST00000508472 CRAMP1Q96RY5 1269 aa20.24■□□□□ 0.83
DDR1-264ENST00000508472 TCIRG1Q13488 830 aa20.23■□□□□ 0.83
DDR1-264ENST00000508472 KRT24Q2M2I5 525 aa20.23■□□□□ 0.83
DDR1-264ENST00000508472 DUSP27Q5VZP5 1158 aa20.23■□□□□ 0.83
DDR1-264ENST00000508472 MBIPQ9NS73 344 aa20.23■□□□□ 0.83
DDR1-264ENST00000508472 IQCA1LA6NCM1 817 aa20.22■□□□□ 0.83
DDR1-264ENST00000508472 ZNF316A6NFI3 1004 aaPredicted RBP20.22■□□□□ 0.83
DDR1-264ENST00000508472 ANP32CO43423 234 aa20.22■□□□□ 0.83
DDR1-264ENST00000508472 SLC10A5Q5PT55 438 aa20.22■□□□□ 0.83
DDR1-264ENST00000508472 PLBD2Q8NHP8 589 aa20.22■□□□□ 0.83
DDR1-264ENST00000508472 PSMD1Q99460 953 aa20.22■□□□□ 0.83
DDR1-264ENST00000508472 ZNF853P0CG23 659 aa20.21■□□□□ 0.83
DDR1-264ENST00000508472 ANKRD13DQ6ZTN6 518 aa20.21■□□□□ 0.83
DDR1-264ENST00000508472 NLRP10Q86W26 655 aa20.21■□□□□ 0.83
DDR1-264ENST00000508472 TRMT112Q9UI30 125 aaKnown RBP20.21■□□□□ 0.83
DDR1-264ENST00000508472 PPEF1O14829 653 aaPredicted RBP20.2■□□□□ 0.82
DDR1-264ENST00000508472 IARSP41252 1262 aaKnown RBP20.2■□□□□ 0.82
DDR1-264ENST00000508472 SYNE4Q8N205 404 aa20.2■□□□□ 0.82
DDR1-264ENST00000508472 JDP2Q8WYK2 163 aa20.2■□□□□ 0.82
DDR1-264ENST00000508472 ZNF277Q9NRM2 450 aaPredicted RBP20.2■□□□□ 0.82
DDR1-264ENST00000508472 SH3TC1Q8TE82 1336 aa20.2■□□□□ 0.82
DDR1-264ENST00000508472 SCN4AP35499 1836 aa20.18■□□□□ 0.82
DDR1-264ENST00000508472 BBOX1O75936 387 aa20.17■□□□□ 0.82
DDR1-264ENST00000508472 DDNO94850 711 aaPredicted RBP20.17■□□□□ 0.82
DDR1-264ENST00000508472 HSP90B1P14625 803 aaKnown RBP20.17■□□□□ 0.82
DDR1-264ENST00000508472 GOLGA2Q08379 1002 aa20.17■□□□□ 0.82
DDR1-264ENST00000508472 OLFM4Q6UX06 510 aa20.17■□□□□ 0.82
DDR1-264ENST00000508472 CCDC27Q2M243 656 aa20.16■□□□□ 0.82
DDR1-264ENST00000508472 DDX46Q7L014 1031 aaKnown RBP20.16■□□□□ 0.82
DDR1-264ENST00000508472 RIC3Q7Z5B4 369 aa20.16■□□□□ 0.82
DDR1-264ENST00000508472 MRS2Q9HD23 443 aa20.16■□□□□ 0.82
DDR1-264ENST00000508472 NCBP3Q53F19 620 aaKnown RBP20.15■□□□□ 0.82
DDR1-264ENST00000508472 CCDC30Q5VVM6 783 aa20.15■□□□□ 0.82
DDR1-264ENST00000508472 TMC4Q7Z404 712 aa20.15■□□□□ 0.82
DDR1-264ENST00000508472 SUPT20HQ8NEM7 779 aa20.15■□□□□ 0.82
DDR1-264ENST00000508472 L3MBTL3Q96JM7 780 aaPredicted RBP20.15■□□□□ 0.82
DDR1-264ENST00000508472 VPS33BQ9H267 617 aa20.15■□□□□ 0.82
DDR1-264ENST00000508472 ATP6V0A2Q9Y487 856 aa20.15■□□□□ 0.82
DDR1-264ENST00000508472 LAMB2P55268 1798 aa20.14■□□□□ 0.81
DDR1-264ENST00000508472 POTECB2RU33 542 aa20.14■□□□□ 0.81
DDR1-264ENST00000508472 DDX58O95786 925 aaKnown RBP20.14■□□□□ 0.81
DDR1-264ENST00000508472 HCLS1P14317 486 aaPredicted RBP20.14■□□□□ 0.81
DDR1-264ENST00000508472 EIF6P56537 245 aaKnown RBP20.14■□□□□ 0.81
DDR1-264ENST00000508472 ABCC4O15439 1325 aa20.13■□□□□ 0.81
DDR1-264ENST00000508472 FZD9O00144 591 aa20.13■□□□□ 0.81
DDR1-264ENST00000508472 ELL2O00472 640 aaPredicted RBP20.13■□□□□ 0.81
DDR1-264ENST00000508472 TCERG1O14776 1098 aaKnown RBP20.13■□□□□ 0.81
DDR1-264ENST00000508472 TRIM28Q13263 835 aaKnown RBP20.13■□□□□ 0.81
DDR1-264ENST00000508472 C3orf67Q6ZVT6 689 aa20.13■□□□□ 0.81
DDR1-264ENST00000508472 GPC2Q8N158 579 aa20.13■□□□□ 0.81
DDR1-264ENST00000508472 LARGE2Q8N3Y3 721 aa20.13■□□□□ 0.81
DDR1-264ENST00000508472 ISCA1Q9BUE6 129 aa20.13■□□□□ 0.81
DDR1-264ENST00000508472 CHADLQ6NUI6 762 aa20.12■□□□□ 0.81
DDR1-264ENST00000508472 HACL1Q9UJ83 578 aa20.12■□□□□ 0.81
DDR1-264ENST00000508472 SNED1Q8TER0 1413 aa20.11■□□□□ 0.81
DDR1-264ENST00000508472 PNMA8AQ86V59 439 aaPredicted RBP20.11■□□□□ 0.81
DDR1-264ENST00000508472 SP8Q8IXZ3 490 aa20.11■□□□□ 0.81
DDR1-264ENST00000508472 NIM1KQ8IY84 436 aa20.11■□□□□ 0.81
DDR1-264ENST00000508472 STK31Q9BXU1 1019 aa20.11■□□□□ 0.81
DDR1-264ENST00000508472 IL16Q14005 1332 aa20.1■□□□□ 0.81
DDR1-264ENST00000508472 ZNF541Q9H0D2 1346 aa20.1■□□□□ 0.81
DDR1-264ENST00000508472 ATP5J2-PTCD1G3V325 749 aa20.1■□□□□ 0.81
DDR1-264ENST00000508472 GRAPQ13588 217 aa20.1■□□□□ 0.81
DDR1-264ENST00000508472 CCDC184Q52MB2 194 aa20.1■□□□□ 0.81
DDR1-264ENST00000508472 DPP8Q6V1X1 898 aaPredicted RBP20.1■□□□□ 0.81
DDR1-264ENST00000508472 LDHDQ86WU2 507 aa20.1■□□□□ 0.81
DDR1-264ENST00000508472 DNAJC5GQ8N7S2 189 aa20.1■□□□□ 0.81
DDR1-264ENST00000508472 C8orf58Q8NAV2 365 aa20.1■□□□□ 0.81
DDR1-264ENST00000508472 GRAPLQ8TC17 118 aaPredicted RBP20.1■□□□□ 0.81
DDR1-264ENST00000508472 PPIP5K2O43314 1243 aa20.09■□□□□ 0.81
DDR1-264ENST00000508472 LMOD1P29536 600 aaPredicted RBP20.09■□□□□ 0.81
DDR1-264ENST00000508472 WWC1Q8IX03 1113 aa20.09■□□□□ 0.81
DDR1-264ENST00000508472 KLRG1Q96E93 195 aa20.09■□□□□ 0.81
DDR1-264ENST00000508472 FAM89AQ96GI7 184 aa20.09■□□□□ 0.81
DDR1-264ENST00000508472 TAF1DQ9H5J8 278 aaPredicted RBP20.09■□□□□ 0.81
DDR1-264ENST00000508472 DDX60Q8IY21 1712 aaKnown RBP20.08■□□□□ 0.81
DDR1-264ENST00000508472 MPNDQ8N594 471 aa20.08■□□□□ 0.81
DDR1-264ENST00000508472 EPHX2P34913 555 aa20.07■□□□□ 0.8
DDR1-264ENST00000508472 SF3B3Q15393 1217 aaKnown RBP20.07■□□□□ 0.8
DDR1-264ENST00000508472 EAPPQ56P03 285 aaPredicted RBP20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms