RNA–Protein interactions for RNA: ENST00000508169.1

COL6A4P1-204, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 3

Gene COL6A4P1, Length 527 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-204ENST00000508169 C8orf34Q49A92 452 aa11.08□□□□□ -0.64
COL6A4P1-204ENST00000508169 MRRFQ96E11 262 aaKnown RBP11.08□□□□□ -0.64
COL6A4P1-204ENST00000508169 NIF3L1Q9GZT8 377 aa11.08□□□□□ -0.64
COL6A4P1-204ENST00000508169 SENP3-EIF4A1A0A087X0R7 540 aa11.06□□□□□ -0.64
COL6A4P1-204ENST00000508169 TYRO3Q06418 890 aa11.06□□□□□ -0.64
COL6A4P1-204ENST00000508169 NLRP8Q86W28 1048 aa11.06□□□□□ -0.64
COL6A4P1-204ENST00000508169 CEP63Q96MT8 703 aa11.06□□□□□ -0.64
COL6A4P1-204ENST00000508169 GGNBP2Q9H3C7 697 aa11.06□□□□□ -0.64
COL6A4P1-204ENST00000508169 DACH1Q9UI36 760 aa11.06□□□□□ -0.64
COL6A4P1-204ENST00000508169 SOBPA7XYQ1 873 aa11.05□□□□□ -0.64
COL6A4P1-204ENST00000508169 EPB42P16452 691 aa11.05□□□□□ -0.64
COL6A4P1-204ENST00000508169 EFHC2Q5JST6 749 aa11.05□□□□□ -0.64
COL6A4P1-204ENST00000508169 CMTR1Q8N1G2 835 aaKnown RBP11.05□□□□□ -0.64
COL6A4P1-204ENST00000508169 BCL11AQ9H165 835 aa11.05□□□□□ -0.64
COL6A4P1-204ENST00000508169 USP20Q9Y2K6 914 aa11.05□□□□□ -0.64
COL6A4P1-204ENST00000508169 RTCBQ9Y3I0 505 aaKnown RBP11.05□□□□□ -0.64
COL6A4P1-204ENST00000508169 A6NHS1 94 aa11.04□□□□□ -0.64
COL6A4P1-204ENST00000508169 LDHBP07195 334 aaKnown RBP11.04□□□□□ -0.64
COL6A4P1-204ENST00000508169 FGD1P98174 961 aa11.04□□□□□ -0.64
COL6A4P1-204ENST00000508169 SAMD5Q5TGI4 173 aa11.04□□□□□ -0.64
COL6A4P1-204ENST00000508169 KIAA1522Q9P206 1035 aaPredicted RBP11.04□□□□□ -0.64
COL6A4P1-204ENST00000508169 FNDC3AQ9Y2H6 1198 aaKnown RBP11.04□□□□□ -0.64
COL6A4P1-204ENST00000508169 ATP2B2Q01814 1243 aa11.03□□□□□ -0.64
COL6A4P1-204ENST00000508169 LBRQ14739 615 aaKnown RBP11.03□□□□□ -0.64
COL6A4P1-204ENST00000508169 SENP2Q9HC62 589 aa11.03□□□□□ -0.64
COL6A4P1-204ENST00000508169 NEFLP07196 543 aa11.02□□□□□ -0.65
COL6A4P1-204ENST00000508169 PTSQ03393 145 aa11.02□□□□□ -0.65
COL6A4P1-204ENST00000508169 TRIP4Q15650 581 aaPredicted RBP11.02□□□□□ -0.65
COL6A4P1-204ENST00000508169 ENOX2Q16206 610 aaKnown RBP11.02□□□□□ -0.65
COL6A4P1-204ENST00000508169 RIPOR1Q6ZS17 1223 aa11.02□□□□□ -0.65
COL6A4P1-204ENST00000508169 KIFC2Q96AC6 838 aa11.02□□□□□ -0.65
COL6A4P1-204ENST00000508169 BRD7Q9NPI1 651 aa11.02□□□□□ -0.65
COL6A4P1-204ENST00000508169 KCNMB2Q9Y691 235 aa11.02□□□□□ -0.65
COL6A4P1-204ENST00000508169 PNMA6FA0A0J9YX94 578 aa11.01□□□□□ -0.65
COL6A4P1-204ENST00000508169 SLC35F4A4IF30 521 aa11.01□□□□□ -0.65
COL6A4P1-204ENST00000508169 UBAP1LF5GYI3 381 aa11.01□□□□□ -0.65
COL6A4P1-204ENST00000508169 PRPF40AO75400 957 aaKnown RBP11.01□□□□□ -0.65
COL6A4P1-204ENST00000508169 FIGNL1Q6PIW4 674 aa11.01□□□□□ -0.65
COL6A4P1-204ENST00000508169 GRNP28799 593 aaKnown RBP11□□□□□ -0.65
COL6A4P1-204ENST00000508169 ORC1Q13415 861 aa11□□□□□ -0.65
COL6A4P1-204ENST00000508169 ZNF438Q7Z4V0 828 aa11□□□□□ -0.65
COL6A4P1-204ENST00000508169 CSRNP1Q96S65 589 aa11□□□□□ -0.65
COL6A4P1-204ENST00000508169 IRX2Q9BZI1 471 aaPredicted RBP11□□□□□ -0.65
COL6A4P1-204ENST00000508169 PDE12Q6L8Q7 609 aaKnown RBP10.99□□□□□ -0.65
COL6A4P1-204ENST00000508169 XKR5Q6UX68 686 aa10.99□□□□□ -0.65
COL6A4P1-204ENST00000508169 ZCCHC2Q9C0B9 1178 aaKnown RBP10.99□□□□□ -0.65
COL6A4P1-204ENST00000508169 NUCKS1Q9H1E3 243 aaKnown RBP10.99□□□□□ -0.65
COL6A4P1-204ENST00000508169 WWC3Q9ULE0 1092 aa10.99□□□□□ -0.65
COL6A4P1-204ENST00000508169 H7C1W4 665 aa10.98□□□□□ -0.65
COL6A4P1-204ENST00000508169 ATXN7O15265 892 aaPredicted RBP10.98□□□□□ -0.65
COL6A4P1-204ENST00000508169 FAM157BP0CG42 384 aa10.98□□□□□ -0.65
COL6A4P1-204ENST00000508169 ALG1LQ6GMV1 187 aa10.98□□□□□ -0.65
COL6A4P1-204ENST00000508169 TRIM47Q96LD4 638 aa10.98□□□□□ -0.65
COL6A4P1-204ENST00000508169 EIF1AYO14602 144 aaKnown RBP10.97□□□□□ -0.65
COL6A4P1-204ENST00000508169 XYLBO75191 536 aa10.97□□□□□ -0.65
COL6A4P1-204ENST00000508169 TNFRSF21O75509 655 aa10.97□□□□□ -0.65
COL6A4P1-204ENST00000508169 THBS1P07996 1170 aa10.97□□□□□ -0.65
COL6A4P1-204ENST00000508169 VAMP1P23763 118 aa10.97□□□□□ -0.65
COL6A4P1-204ENST00000508169 XPCQ01831 940 aaPredicted RBP10.97□□□□□ -0.65
COL6A4P1-204ENST00000508169 CCDC155Q8N6L0 562 aa10.97□□□□□ -0.65
COL6A4P1-204ENST00000508169 SNX29Q8TEQ0 813 aa10.97□□□□□ -0.65
COL6A4P1-204ENST00000508169 SETDB2Q96T68 719 aa10.97□□□□□ -0.65
COL6A4P1-204ENST00000508169 DUSP9Q99956 384 aaKnown RBP10.97□□□□□ -0.65
COL6A4P1-204ENST00000508169 DNAJC25Q9H1X3 360 aa10.97□□□□□ -0.65
COL6A4P1-204ENST00000508169 C11orf16Q9NQ32 467 aa10.97□□□□□ -0.65
COL6A4P1-204ENST00000508169 PCDHGC4Q9Y5F7 938 aa10.97□□□□□ -0.65
COL6A4P1-204ENST00000508169 CPNE3O75131 537 aaKnown RBP10.96□□□□□ -0.65
COL6A4P1-204ENST00000508169 ELP3Q9H9T3 547 aa10.96□□□□□ -0.65
COL6A4P1-204ENST00000508169 FOXD3Q9UJU5 478 aaPredicted RBP10.96□□□□□ -0.65
COL6A4P1-204ENST00000508169 DCDC2BA2VCK2 349 aa10.95□□□□□ -0.66
COL6A4P1-204ENST00000508169 EGFRP00533 1210 aa10.95□□□□□ -0.66
COL6A4P1-204ENST00000508169 KCNQ4P56696 695 aa10.95□□□□□ -0.66
COL6A4P1-204ENST00000508169 FBF1Q8TES7 1133 aa10.95□□□□□ -0.66
COL6A4P1-204ENST00000508169 TMEM63CQ9P1W3 806 aa10.95□□□□□ -0.66
COL6A4P1-204ENST00000508169 GMPR2Q9P2T1 348 aaKnown RBP10.95□□□□□ -0.66
COL6A4P1-204ENST00000508169 PARP2Q9UGN5 583 aa10.95□□□□□ -0.66
COL6A4P1-204ENST00000508169 KCNH4Q9UQ05 1017 aa10.95□□□□□ -0.66
COL6A4P1-204ENST00000508169 KHNYNO15037 678 aaKnown RBP10.94□□□□□ -0.66
COL6A4P1-204ENST00000508169 EFSO43281 561 aa10.94□□□□□ -0.66
COL6A4P1-204ENST00000508169 UBAP2LQ14157 1087 aaKnown RBP10.94□□□□□ -0.66
COL6A4P1-204ENST00000508169 TRIM22Q8IYM9 498 aa10.94□□□□□ -0.66
COL6A4P1-204ENST00000508169 PHACTR2O75167 634 aa10.93□□□□□ -0.66
COL6A4P1-204ENST00000508169 SFSWAPQ12872 951 aaKnown RBP10.93□□□□□ -0.66
COL6A4P1-204ENST00000508169 DBN1Q16643 649 aa10.93□□□□□ -0.66
COL6A4P1-204ENST00000508169 NLRP13Q86W25 1043 aa10.93□□□□□ -0.66
COL6A4P1-204ENST00000508169 CFHR5Q9BXR6 569 aa10.93□□□□□ -0.66
COL6A4P1-204ENST00000508169 MRS2Q9HD23 443 aa10.93□□□□□ -0.66
COL6A4P1-204ENST00000508169 CUEDC1Q9NWM3 386 aaPredicted RBP10.93□□□□□ -0.66
COL6A4P1-204ENST00000508169 ITGAEP38570 1179 aa10.92□□□□□ -0.66
COL6A4P1-204ENST00000508169 DAB2P98082 770 aa10.92□□□□□ -0.66
COL6A4P1-204ENST00000508169 TNP2Q05952 138 aa10.92□□□□□ -0.66
COL6A4P1-204ENST00000508169 LAMC2Q13753 1193 aa10.92□□□□□ -0.66
COL6A4P1-204ENST00000508169 MRPL58Q14197 206 aaKnown RBP10.92□□□□□ -0.66
COL6A4P1-204ENST00000508169 TMC4Q7Z404 712 aa10.92□□□□□ -0.66
COL6A4P1-204ENST00000508169 GMCL1Q96IK5 515 aa10.92□□□□□ -0.66
COL6A4P1-204ENST00000508169 FAM161BQ96MY7 647 aa10.92□□□□□ -0.66
COL6A4P1-204ENST00000508169 RNF19AQ9NV58 838 aa10.92□□□□□ -0.66
COL6A4P1-204ENST00000508169 RECKO95980 971 aa10.91□□□□□ -0.66
COL6A4P1-204ENST00000508169 MAPTP10636 758 aaKnown RBP10.91□□□□□ -0.66
COL6A4P1-204ENST00000508169 ITGA6P23229 1130 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms