RNA–Protein interactions for RNA: ENST00000508167.5

PROM1-207, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-207ENST00000508167 CAMTA2O94983 1202 aa13.69□□□□□ -0.22
PROM1-207ENST00000508167 BEND3Q5T5X7 828 aa13.69□□□□□ -0.22
PROM1-207ENST00000508167 CCDC24Q8N4L8 307 aa13.69□□□□□ -0.22
PROM1-207ENST00000508167 UTP14AQ9BVJ6 771 aaKnown RBP13.69□□□□□ -0.22
PROM1-207ENST00000508167 ADCY9O60503 1353 aa13.69□□□□□ -0.22
PROM1-207ENST00000508167 NEURL1BA8MQ27 555 aa13.69□□□□□ -0.22
PROM1-207ENST00000508167 GRM8O00222 908 aa13.69□□□□□ -0.22
PROM1-207ENST00000508167 RGS3P49796 1198 aa13.69□□□□□ -0.22
PROM1-207ENST00000508167 TPTE2Q6XPS3 522 aa13.69□□□□□ -0.22
PROM1-207ENST00000508167 CCDC191Q8NCU4 936 aa13.69□□□□□ -0.22
PROM1-207ENST00000508167 PARP3Q9Y6F1 533 aa13.69□□□□□ -0.22
PROM1-207ENST00000508167 GNAI2P04899 355 aa13.68□□□□□ -0.22
PROM1-207ENST00000508167 TAF7LQ5H9L4 462 aa13.68□□□□□ -0.22
PROM1-207ENST00000508167 INTS3Q68E01 1043 aaKnown RBP13.68□□□□□ -0.22
PROM1-207ENST00000508167 AMIGO3Q86WK7 504 aa13.68□□□□□ -0.22
PROM1-207ENST00000508167 ZBTB7AO95365 584 aa13.68□□□□□ -0.22
PROM1-207ENST00000508167 PARP10Q53GL7 1025 aa13.68□□□□□ -0.22
PROM1-207ENST00000508167 CLEC4GQ6UXB4 293 aa13.68□□□□□ -0.22
PROM1-207ENST00000508167 NUTM1Q86Y26 1132 aa13.68□□□□□ -0.22
PROM1-207ENST00000508167 SBF2Q86WG5 1849 aa13.68□□□□□ -0.22
PROM1-207ENST00000508167 USP42Q9H9J4 1324 aaKnown RBP13.68□□□□□ -0.22
PROM1-207ENST00000508167 GCKRQ14397 625 aa13.68□□□□□ -0.22
PROM1-207ENST00000508167 TBC1D9BQ66K14 1250 aa13.68□□□□□ -0.22
PROM1-207ENST00000508167 AKT1S1Q96B36 256 aa13.68□□□□□ -0.22
PROM1-207ENST00000508167 ATF5Q9Y2D1 282 aaPredicted RBP13.68□□□□□ -0.22
PROM1-207ENST00000508167 NUCB1Q02818 461 aa13.68□□□□□ -0.22
PROM1-207ENST00000508167 OS9Q13438 667 aaPredicted RBP13.68□□□□□ -0.22
PROM1-207ENST00000508167 LRP10Q7Z4F1 713 aa13.67□□□□□ -0.22
PROM1-207ENST00000508167 HSP90B1P14625 803 aaKnown RBP13.67□□□□□ -0.22
PROM1-207ENST00000508167 LRRFIP2Q9Y608 721 aaKnown RBP13.67□□□□□ -0.22
PROM1-207ENST00000508167 APBB1O00213 710 aa13.67□□□□□ -0.22
PROM1-207ENST00000508167 IGKV5-2P06315 115 aa13.67□□□□□ -0.22
PROM1-207ENST00000508167 CNBD1Q8NA66 436 aa13.67□□□□□ -0.22
PROM1-207ENST00000508167 PAPPAQ13219 1627 aa13.66□□□□□ -0.22
PROM1-207ENST00000508167 MMP10P09238 476 aa13.66□□□□□ -0.22
PROM1-207ENST00000508167 NBPF7P0C2Y1 421 aaPredicted RBP13.66□□□□□ -0.22
PROM1-207ENST00000508167 POLD1P28340 1107 aa13.66□□□□□ -0.22
PROM1-207ENST00000508167 NLRP10Q86W26 655 aa13.66□□□□□ -0.22
PROM1-207ENST00000508167 NYXQ9GZU5 481 aa13.66□□□□□ -0.22
PROM1-207ENST00000508167 GYS1P13807 737 aa13.66□□□□□ -0.22
PROM1-207ENST00000508167 NFIXQ14938 502 aa13.66□□□□□ -0.22
PROM1-207ENST00000508167 SH3TC1Q8TE82 1336 aa13.66□□□□□ -0.22
PROM1-207ENST00000508167 PXDNLA1KZ92 1463 aa13.66□□□□□ -0.22
PROM1-207ENST00000508167 IRS4O14654 1257 aaPredicted RBP13.65□□□□□ -0.22
PROM1-207ENST00000508167 HCLS1P14317 486 aaPredicted RBP13.65□□□□□ -0.22
PROM1-207ENST00000508167 ST5P78524 1137 aa13.65□□□□□ -0.22
PROM1-207ENST00000508167 PNPLA7Q6ZV29 1317 aa13.65□□□□□ -0.22
PROM1-207ENST00000508167 HMMRO75330 724 aa13.65□□□□□ -0.22
PROM1-207ENST00000508167 SUSD4Q5VX71 490 aa13.65□□□□□ -0.22
PROM1-207ENST00000508167 USP44Q9H0E7 712 aa13.65□□□□□ -0.22
PROM1-207ENST00000508167 UBR2Q8IWV8 1755 aa13.65□□□□□ -0.22
PROM1-207ENST00000508167 SERPINB2P05120 415 aa13.64□□□□□ -0.23
PROM1-207ENST00000508167 RWDD1Q9H446 243 aaPredicted RBP13.64□□□□□ -0.23
PROM1-207ENST00000508167 ANP32AP39687 249 aaKnown RBP13.64□□□□□ -0.23
PROM1-207ENST00000508167 ISCA1Q9BUE6 129 aa13.64□□□□□ -0.23
PROM1-207ENST00000508167 SYNE4Q8N205 404 aa13.63□□□□□ -0.23
PROM1-207ENST00000508167 PDGFDQ9GZP0 370 aaPredicted RBP13.63□□□□□ -0.23
PROM1-207ENST00000508167 SRGAP3O43295 1099 aa13.63□□□□□ -0.23
PROM1-207ENST00000508167 ZNF34Q8IZ26 560 aa13.63□□□□□ -0.23
PROM1-207ENST00000508167 ZBTB38Q8NAP3 1195 aaPredicted RBP13.63□□□□□ -0.23
PROM1-207ENST00000508167 NLRP3Q96P20 1036 aa13.63□□□□□ -0.23
PROM1-207ENST00000508167 PCCAP05165 728 aaPredicted RBP13.62□□□□□ -0.23
PROM1-207ENST00000508167 CCDC57Q2TAC2 916 aa13.62□□□□□ -0.23
PROM1-207ENST00000508167 LMBR1LQ6UX01 489 aa13.62□□□□□ -0.23
PROM1-207ENST00000508167 BCL2L12Q9HB09 334 aa13.62□□□□□ -0.23
PROM1-207ENST00000508167 C4BP0C0L5 1744 aa13.61□□□□□ -0.23
PROM1-207ENST00000508167 ERFEQ4G0M1 354 aa13.61□□□□□ -0.23
PROM1-207ENST00000508167 SUCLG2Q96I99 432 aa13.61□□□□□ -0.23
PROM1-207ENST00000508167 LAMB4A4D0S4 1761 aa13.61□□□□□ -0.23
PROM1-207ENST00000508167 UBN2Q6ZU65 1347 aa13.61□□□□□ -0.23
PROM1-207ENST00000508167 TRIM28Q13263 835 aaKnown RBP13.61□□□□□ -0.23
PROM1-207ENST00000508167 SLC16A10Q8TF71 515 aa13.61□□□□□ -0.23
PROM1-207ENST00000508167 TBC1D32Q96NH3 1257 aa13.61□□□□□ -0.23
PROM1-207ENST00000508167 MYH14Q7Z406 1995 aaKnown RBP13.61□□□□□ -0.23
PROM1-207ENST00000508167 BICC1Q9H694 974 aaKnown RBP13.61□□□□□ -0.23
PROM1-207ENST00000508167 CARMIL3Q8ND23 1372 aa13.6□□□□□ -0.23
PROM1-207ENST00000508167 RPGRQ92834 1020 aaKnown RBP13.6□□□□□ -0.23
PROM1-207ENST00000508167 SIL1Q9H173 461 aa13.6□□□□□ -0.23
PROM1-207ENST00000508167 TMX4Q9H1E5 349 aaPredicted RBP13.6□□□□□ -0.23
PROM1-207ENST00000508167 TJP1Q07157 1748 aa13.6□□□□□ -0.23
PROM1-207ENST00000508167 PDE8AO60658 829 aa13.59□□□□□ -0.23
PROM1-207ENST00000508167 IFIT5Q13325 482 aaKnown RBP13.59□□□□□ -0.23
PROM1-207ENST00000508167 WWC3Q9ULE0 1092 aa13.59□□□□□ -0.23
PROM1-207ENST00000508167 SURF6O75683 361 aaKnown RBP13.59□□□□□ -0.23
PROM1-207ENST00000508167 RPAP2Q8IXW5 612 aaPredicted RBP13.59□□□□□ -0.23
PROM1-207ENST00000508167 ZNF622Q969S3 477 aaKnown RBP eCLIP13.59□□□□□ -0.23
PROM1-207ENST00000508167 H7C1W4 665 aa13.59□□□□□ -0.23
PROM1-207ENST00000508167 CCDC152Q4G0S7 254 aa13.59□□□□□ -0.23
PROM1-207ENST00000508167 G3BP1Q13283 466 aaKnown RBP eCLIP13.58□□□□□ -0.24
PROM1-207ENST00000508167 DDX46Q7L014 1031 aaKnown RBP13.58□□□□□ -0.24
PROM1-207ENST00000508167 MPHOSPH8Q99549 860 aa13.58□□□□□ -0.24
PROM1-207ENST00000508167 MTFR1LQ9H019 292 aa13.58□□□□□ -0.24
PROM1-207ENST00000508167 ANKRD18BA2A2Z9 1011 aa13.57□□□□□ -0.24
PROM1-207ENST00000508167 CHD1LQ86WJ1 897 aa13.57□□□□□ -0.24
PROM1-207ENST00000508167 CNNM1Q9NRU3 951 aa13.57□□□□□ -0.24
PROM1-207ENST00000508167 LY75O60449 1722 aa13.57□□□□□ -0.24
PROM1-207ENST00000508167 NUP188Q5SRE5 1749 aa13.57□□□□□ -0.24
PROM1-207ENST00000508167 NTSR2O95665 410 aa13.57□□□□□ -0.24
PROM1-207ENST00000508167 PRR5LQ6MZQ0 368 aa13.57□□□□□ -0.24
PROM1-207ENST00000508167 SALL3Q9BXA9 1300 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms