RNA–Protein interactions for RNA: ENST00000507968.1

SSBP2-209, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 4

Gene SSBP2, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-209ENST00000507968 USP42Q9H9J4 1324 aaKnown RBP13.44□□□□□ -0.26
SSBP2-209ENST00000507968 SRCAPQ6ZRS2 3230 aa13.44□□□□□ -0.26
SSBP2-209ENST00000507968 SLC15A2Q16348 729 aa13.44□□□□□ -0.26
SSBP2-209ENST00000507968 UBE3BQ7Z3V4 1068 aa13.44□□□□□ -0.26
SSBP2-209ENST00000507968 SIRT2Q8IXJ6 389 aa13.44□□□□□ -0.26
SSBP2-209ENST00000507968 GCC1Q96CN9 775 aa13.44□□□□□ -0.26
SSBP2-209ENST00000507968 SUCLG2Q96I99 432 aa13.44□□□□□ -0.26
SSBP2-209ENST00000507968 BCL2L12Q9HB09 334 aa13.44□□□□□ -0.26
SSBP2-209ENST00000507968 LY75O60449 1722 aa13.43□□□□□ -0.26
SSBP2-209ENST00000507968 SUSD4Q5VX71 490 aa13.43□□□□□ -0.26
SSBP2-209ENST00000507968 SMIM5Q71RC9 77 aa13.43□□□□□ -0.26
SSBP2-209ENST00000507968 DEFB132Q7Z7B7 95 aa13.43□□□□□ -0.26
SSBP2-209ENST00000507968 AMIGO3Q86WK7 504 aa13.43□□□□□ -0.26
SSBP2-209ENST00000507968 NLGN1Q8N2Q7 840 aa13.43□□□□□ -0.26
SSBP2-209ENST00000507968 PLA2G12BQ9BX93 195 aa13.43□□□□□ -0.26
SSBP2-209ENST00000507968 NYXQ9GZU5 481 aa13.43□□□□□ -0.26
SSBP2-209ENST00000507968 DCTPP1Q9H773 170 aa13.43□□□□□ -0.26
SSBP2-209ENST00000507968 SRP68Q9UHB9 627 aaKnown RBP13.43□□□□□ -0.26
SSBP2-209ENST00000507968 KDM2BQ8NHM5 1336 aa13.42□□□□□ -0.26
SSBP2-209ENST00000507968 CDHR2Q9BYE9 1310 aa13.42□□□□□ -0.26
SSBP2-209ENST00000507968 ZNF827Q17R98 1081 aa13.42□□□□□ -0.26
SSBP2-209ENST00000507968 TBC1D9BQ66K14 1250 aa13.42□□□□□ -0.26
SSBP2-209ENST00000507968 TPTE2Q6XPS3 522 aa13.42□□□□□ -0.26
SSBP2-209ENST00000507968 SMC5Q8IY18 1101 aa13.42□□□□□ -0.26
SSBP2-209ENST00000507968 SSH3Q8TE77 659 aa13.42□□□□□ -0.26
SSBP2-209ENST00000507968 FAM89AQ96GI7 184 aa13.42□□□□□ -0.26
SSBP2-209ENST00000507968 KAZALD1Q96I82 304 aa13.42□□□□□ -0.26
SSBP2-209ENST00000507968 SH3TC1Q8TE82 1336 aa13.41□□□□□ -0.26
SSBP2-209ENST00000507968 RREB1Q92766 1687 aa13.41□□□□□ -0.26
SSBP2-209ENST00000507968 MSH5O43196 834 aa13.41□□□□□ -0.26
SSBP2-209ENST00000507968 SRGAP3O43295 1099 aa13.41□□□□□ -0.26
SSBP2-209ENST00000507968 GYS1P13807 737 aa13.41□□□□□ -0.26
SSBP2-209ENST00000507968 FOXO4P98177 505 aa13.41□□□□□ -0.26
SSBP2-209ENST00000507968 POLA2Q14181 598 aa13.41□□□□□ -0.26
SSBP2-209ENST00000507968 RABL6Q3YEC7 729 aaPredicted RBP13.41□□□□□ -0.26
SSBP2-209ENST00000507968 HSP90AB4PQ58FF6 505 aa13.41□□□□□ -0.26
SSBP2-209ENST00000507968 COL23A1Q86Y22 540 aaPredicted RBP13.41□□□□□ -0.26
SSBP2-209ENST00000507968 JARID2Q92833 1246 aaPredicted RBP13.41□□□□□ -0.26
SSBP2-209ENST00000507968 BICC1Q9H694 974 aaKnown RBP13.41□□□□□ -0.26
SSBP2-209ENST00000507968 UBN2Q6ZU65 1347 aa13.4□□□□□ -0.26
SSBP2-209ENST00000507968 IRS4O14654 1257 aaPredicted RBP13.4□□□□□ -0.26
SSBP2-209ENST00000507968 PDE8AO60658 829 aa13.4□□□□□ -0.26
SSBP2-209ENST00000507968 CSF1RP07333 972 aa13.4□□□□□ -0.26
SSBP2-209ENST00000507968 GTF2E1P29083 439 aaPredicted RBP13.4□□□□□ -0.26
SSBP2-209ENST00000507968 TM4SF1P30408 202 aa13.4□□□□□ -0.26
SSBP2-209ENST00000507968 SLC10A5Q5PT55 438 aa13.4□□□□□ -0.26
SSBP2-209ENST00000507968 BICDL1Q6ZP65 573 aa13.4□□□□□ -0.26
SSBP2-209ENST00000507968 C4BP0C0L5 1744 aa13.39□□□□□ -0.27
SSBP2-209ENST00000507968 EP400Q96L91 3159 aa13.39□□□□□ -0.27
SSBP2-209ENST00000507968 PNMA6EA0A0J9YXQ4 647 aa13.39□□□□□ -0.27
SSBP2-209ENST00000507968 RAB11FIP3O75154 756 aa13.39□□□□□ -0.27
SSBP2-209ENST00000507968 NTSR2O95665 410 aa13.39□□□□□ -0.27
SSBP2-209ENST00000507968 RTL5Q5HYW3 569 aaPredicted RBP13.39□□□□□ -0.27
SSBP2-209ENST00000507968 EPHA10Q5JZY3 1008 aa13.39□□□□□ -0.27
SSBP2-209ENST00000507968 LMBR1LQ6UX01 489 aa13.39□□□□□ -0.27
SSBP2-209ENST00000507968 NBPF5PQ86XG9 351 aaPredicted RBP13.39□□□□□ -0.27
SSBP2-209ENST00000507968 ZBTB47Q9UFB7 747 aaPredicted RBP13.39□□□□□ -0.27
SSBP2-209ENST00000507968 COL5A3P25940 1745 aaPredicted RBP13.39□□□□□ -0.27
SSBP2-209ENST00000507968 NFIXQ14938 502 aa13.38□□□□□ -0.27
SSBP2-209ENST00000507968 NOP58Q9Y2X3 529 aaKnown RBP13.38□□□□□ -0.27
SSBP2-209ENST00000507968 PNPLA7Q6ZV29 1317 aa13.38□□□□□ -0.27
SSBP2-209ENST00000507968 FAM177BA6PVY3 158 aa13.37□□□□□ -0.27
SSBP2-209ENST00000507968 SURF6O75683 361 aaKnown RBP13.37□□□□□ -0.27
SSBP2-209ENST00000507968 SLC16A10Q8TF71 515 aa13.37□□□□□ -0.27
SSBP2-209ENST00000507968 MYH14Q7Z406 1995 aaKnown RBP13.37□□□□□ -0.27
SSBP2-209ENST00000507968 CARMIL3Q8ND23 1372 aa13.36□□□□□ -0.27
SSBP2-209ENST00000507968 NUCB1Q02818 461 aa13.36□□□□□ -0.27
SSBP2-209ENST00000507968 G3BP1Q13283 466 aaKnown RBP eCLIP13.36□□□□□ -0.27
SSBP2-209ENST00000507968 CCDC57Q2TAC2 916 aa13.36□□□□□ -0.27
SSBP2-209ENST00000507968 ANKRD45Q5TZF3 282 aa13.36□□□□□ -0.27
SSBP2-209ENST00000507968 SYNE4Q8N205 404 aa13.36□□□□□ -0.27
SSBP2-209ENST00000507968 TTLL11Q8NHH1 800 aa13.36□□□□□ -0.27
SSBP2-209ENST00000507968 NLRP3Q96P20 1036 aa13.36□□□□□ -0.27
SSBP2-209ENST00000507968 ANO8Q9HCE9 1232 aaPredicted RBP13.36□□□□□ -0.27
SSBP2-209ENST00000507968 COPRSQ9NQ92 184 aa13.36□□□□□ -0.27
SSBP2-209ENST00000507968 FBXO3Q9UK99 471 aa13.36□□□□□ -0.27
SSBP2-209ENST00000507968 NPHP1O15259 732 aa13.35□□□□□ -0.27
SSBP2-209ENST00000507968 SERPINB2P05120 415 aa13.35□□□□□ -0.27
SSBP2-209ENST00000507968 HCLS1P14317 486 aaPredicted RBP13.35□□□□□ -0.27
SSBP2-209ENST00000507968 CTSWP56202 376 aa13.35□□□□□ -0.27
SSBP2-209ENST00000507968 IFIT5Q13325 482 aaKnown RBP13.35□□□□□ -0.27
SSBP2-209ENST00000507968 SF3B3Q15393 1217 aaKnown RBP13.35□□□□□ -0.27
SSBP2-209ENST00000507968 ERFEQ4G0M1 354 aa13.35□□□□□ -0.27
SSBP2-209ENST00000507968 CCDC152Q4G0S7 254 aa13.35□□□□□ -0.27
SSBP2-209ENST00000507968 ERC1Q8IUD2 1116 aa13.35□□□□□ -0.27
SSBP2-209ENST00000507968 PDZRN3Q9UPQ7 1066 aa13.35□□□□□ -0.27
SSBP2-209ENST00000507968 ANKRD18BA2A2Z9 1011 aa13.34□□□□□ -0.27
SSBP2-209ENST00000507968 RFX5P48382 616 aaPredicted RBP13.34□□□□□ -0.27
SSBP2-209ENST00000507968 PTPN12Q05209 780 aaKnown RBP13.34□□□□□ -0.27
SSBP2-209ENST00000507968 CHD1LQ86WJ1 897 aa13.34□□□□□ -0.27
SSBP2-209ENST00000507968 NUTM1Q86Y26 1132 aa13.34□□□□□ -0.27
SSBP2-209ENST00000507968 PELP1Q8IZL8 1130 aaKnown RBP13.34□□□□□ -0.27
SSBP2-209ENST00000507968 CHMP3Q9Y3E7 222 aa13.34□□□□□ -0.27
SSBP2-209ENST00000507968 PARP3Q9Y6F1 533 aa13.34□□□□□ -0.27
SSBP2-209ENST00000507968 RGPD3A6NKT7 1758 aaPredicted RBP13.34□□□□□ -0.27
SSBP2-209ENST00000507968 RGPD4Q7Z3J3 1758 aa13.34□□□□□ -0.27
SSBP2-209ENST00000507968 TNS1Q9HBL0 1735 aaKnown RBP13.33□□□□□ -0.27
SSBP2-209ENST00000507968 POLRMTO00411 1230 aaKnown RBP13.33□□□□□ -0.28
SSBP2-209ENST00000507968 ST5P78524 1137 aa13.33□□□□□ -0.28
SSBP2-209ENST00000507968 CNBD1Q8NA66 436 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms