RNA–Protein interactions for RNA: ENST00000507901.5

DDR1-261, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-261ENST00000507901 PI4KAP2A4QPH2 592 aa20.99■□□□□ 0.95
DDR1-261ENST00000507901 DDX58O95786 925 aaKnown RBP20.99■□□□□ 0.95
DDR1-261ENST00000507901 ERFEQ4G0M1 354 aa20.99■□□□□ 0.95
DDR1-261ENST00000507901 RIC3Q7Z5B4 369 aa20.99■□□□□ 0.95
DDR1-261ENST00000507901 NUTM1Q86Y26 1132 aa20.99■□□□□ 0.95
DDR1-261ENST00000507901 PI4KAP1Q8N8J0 262 aa20.99■□□□□ 0.95
DDR1-261ENST00000507901 PDZRN3Q9UPQ7 1066 aa20.99■□□□□ 0.95
DDR1-261ENST00000507901 FAM177BA6PVY3 158 aa20.98■□□□□ 0.95
DDR1-261ENST00000507901 PDE6BP35913 854 aa20.98■□□□□ 0.95
DDR1-261ENST00000507901 SLC10A5Q5PT55 438 aa20.98■□□□□ 0.95
DDR1-261ENST00000507901 PPP1R42Q7Z4L9 355 aa20.98■□□□□ 0.95
DDR1-261ENST00000507901 MRPL50Q8N5N7 158 aaKnown RBP20.98■□□□□ 0.95
DDR1-261ENST00000507901 MAP3K2Q9Y2U5 619 aa20.98■□□□□ 0.95
DDR1-261ENST00000507901 ATP5J2-PTCD1G3V325 749 aa20.97■□□□□ 0.95
DDR1-261ENST00000507901 IGKV5-2P06315 115 aa20.97■□□□□ 0.95
DDR1-261ENST00000507901 CRY2Q49AN0 593 aa20.97■□□□□ 0.95
DDR1-261ENST00000507901 C2CD5Q86YS7 1000 aa20.97■□□□□ 0.95
DDR1-261ENST00000507901 SSH1Q8WYL5 1049 aa20.97■□□□□ 0.95
DDR1-261ENST00000507901 UTP14AQ9BVJ6 771 aaKnown RBP20.97■□□□□ 0.95
DDR1-261ENST00000507901 SRGNP10124 158 aa20.96■□□□□ 0.95
DDR1-261ENST00000507901 ALDH1L2Q3SY69 923 aa20.96■□□□□ 0.95
DDR1-261ENST00000507901 PIM2Q9P1W9 311 aa20.96■□□□□ 0.95
DDR1-261ENST00000507901 CHD4Q14839 1912 aa20.96■□□□□ 0.95
DDR1-261ENST00000507901 SLX4Q8IY92 1834 aa20.95■□□□□ 0.94
DDR1-261ENST00000507901 BRPF1P55201 1214 aaPredicted RBP20.95■□□□□ 0.94
DDR1-261ENST00000507901 SYNE4Q8N205 404 aa20.95■□□□□ 0.94
DDR1-261ENST00000507901 MYD88Q99836 296 aa20.95■□□□□ 0.94
DDR1-261ENST00000507901 CACNA1SQ13698 1873 aa20.94■□□□□ 0.94
DDR1-261ENST00000507901 H0YIN7 160 aa20.94■□□□□ 0.94
DDR1-261ENST00000507901 C3orf67Q6ZVT6 689 aa20.94■□□□□ 0.94
DDR1-261ENST00000507901 CCDC191Q8NCU4 936 aa20.94■□□□□ 0.94
DDR1-261ENST00000507901 WWC3Q9ULE0 1092 aa20.94■□□□□ 0.94
DDR1-261ENST00000507901 FKBP5Q13451 457 aaPredicted RBP20.93■□□□□ 0.94
DDR1-261ENST00000507901 STYK1Q6J9G0 422 aa20.93■□□□□ 0.94
DDR1-261ENST00000507901 DNAAF4Q8WXU2 420 aa20.93■□□□□ 0.94
DDR1-261ENST00000507901 SH3TC1Q8TE82 1336 aa20.93■□□□□ 0.94
DDR1-261ENST00000507901 NPHP1O15259 732 aa20.92■□□□□ 0.94
DDR1-261ENST00000507901 MASTLQ96GX5 879 aa20.92■□□□□ 0.94
DDR1-261ENST00000507901 TRMT112Q9UI30 125 aaKnown RBP20.92■□□□□ 0.94
DDR1-261ENST00000507901 NEURL1BA8MQ27 555 aa20.91■□□□□ 0.94
DDR1-261ENST00000507901 GTF2E1P29083 439 aaPredicted RBP20.91■□□□□ 0.94
DDR1-261ENST00000507901 RARSP54136 660 aaKnown RBP20.91■□□□□ 0.94
DDR1-261ENST00000507901 DALRD3Q5D0E6 543 aaKnown RBP20.91■□□□□ 0.94
DDR1-261ENST00000507901 ZBTB38Q8NAP3 1195 aaPredicted RBP20.91■□□□□ 0.94
DDR1-261ENST00000507901 NPR1P16066 1061 aa20.9■□□□□ 0.94
DDR1-261ENST00000507901 HOXA10P31260 410 aaPredicted RBP20.9■□□□□ 0.94
DDR1-261ENST00000507901 TTLL6Q8N841 843 aa20.9■□□□□ 0.94
DDR1-261ENST00000507901 CWC25Q9NXE8 425 aaPredicted RBP20.9■□□□□ 0.94
DDR1-261ENST00000507901 BCS1LQ9Y276 419 aa20.9■□□□□ 0.94
DDR1-261ENST00000507901 PTPRCP08575 1304 aa20.89■□□□□ 0.93
DDR1-261ENST00000507901 F6X3S4 739 aa20.89■□□□□ 0.93
DDR1-261ENST00000507901 PCCAP05165 728 aaPredicted RBP20.89■□□□□ 0.93
DDR1-261ENST00000507901 CWF19L2Q2TBE0 894 aaKnown RBP20.89■□□□□ 0.93
DDR1-261ENST00000507901 BEND3Q5T5X7 828 aa20.89■□□□□ 0.93
DDR1-261ENST00000507901 LINS1Q8NG48 757 aa20.89■□□□□ 0.93
DDR1-261ENST00000507901 FAM89AQ96GI7 184 aa20.89■□□□□ 0.93
DDR1-261ENST00000507901 FER1L6Q2WGJ9 1857 aa20.89■□□□□ 0.93
DDR1-261ENST00000507901 SNED1Q8TER0 1413 aa20.88■□□□□ 0.93
DDR1-261ENST00000507901 HCLS1P14317 486 aaPredicted RBP20.88■□□□□ 0.93
DDR1-261ENST00000507901 C7orf43Q8WVR3 580 aa20.88■□□□□ 0.93
DDR1-261ENST00000507901 CNKSR1Q969H4 720 aa20.88■□□□□ 0.93
DDR1-261ENST00000507901 BCL2L13Q9BXK5 485 aa20.88■□□□□ 0.93
DDR1-261ENST00000507901 MYH3P11055 1940 aa20.88■□□□□ 0.93
DDR1-261ENST00000507901 COL4A1P02462 1669 aa20.87■□□□□ 0.93
DDR1-261ENST00000507901 CDHR2Q9BYE9 1310 aa20.87■□□□□ 0.93
DDR1-261ENST00000507901 CASP7P55210 303 aa20.87■□□□□ 0.93
DDR1-261ENST00000507901 NEXNQ0ZGT2 675 aa20.87■□□□□ 0.93
DDR1-261ENST00000507901 GCKRQ14397 625 aa20.87■□□□□ 0.93
DDR1-261ENST00000507901 SBF1O95248 1867 aa20.87■□□□□ 0.93
DDR1-261ENST00000507901 TAF1P21675 1872 aa20.86■□□□□ 0.93
DDR1-261ENST00000507901 H7C1W4 665 aa20.86■□□□□ 0.93
DDR1-261ENST00000507901 PRPF40BQ6NWY9 871 aaKnown RBP20.86■□□□□ 0.93
DDR1-261ENST00000507901 ZNF622Q969S3 477 aaKnown RBP eCLIP20.86■□□□□ 0.93
DDR1-261ENST00000507901 NLRP3Q96P20 1036 aa20.86■□□□□ 0.93
DDR1-261ENST00000507901 SMC4Q9NTJ3 1288 aa20.86■□□□□ 0.93
DDR1-261ENST00000507901 IRS4O14654 1257 aaPredicted RBP20.85■□□□□ 0.93
DDR1-261ENST00000507901 SF3B3Q15393 1217 aaKnown RBP20.85■□□□□ 0.93
DDR1-261ENST00000507901 CRAMP1Q96RY5 1269 aa20.85■□□□□ 0.93
DDR1-261ENST00000507901 ARHGAP27Q6ZUM4 889 aa20.83■□□□□ 0.93
DDR1-261ENST00000507901 LRRC37AA6NMS7 1700 aa20.83■□□□□ 0.92
DDR1-261ENST00000507901 ALDH1L1O75891 902 aa20.82■□□□□ 0.92
DDR1-261ENST00000507901 ALDH1B1P30837 517 aa20.82■□□□□ 0.92
DDR1-261ENST00000507901 JARID2Q92833 1246 aaPredicted RBP20.82■□□□□ 0.92
DDR1-261ENST00000507901 ABCC4O15439 1325 aa20.81■□□□□ 0.92
DDR1-261ENST00000507901 RTL5Q5HYW3 569 aaPredicted RBP20.81■□□□□ 0.92
DDR1-261ENST00000507901 ARHGAP45Q92619 1136 aa20.81■□□□□ 0.92
DDR1-261ENST00000507901 RPGRQ92834 1020 aaKnown RBP20.81■□□□□ 0.92
DDR1-261ENST00000507901 PLA2G12BQ9BX93 195 aa20.81■□□□□ 0.92
DDR1-261ENST00000507901 NOB1Q9ULX3 412 aaKnown RBP20.81■□□□□ 0.92
DDR1-261ENST00000507901 C21orf2O43822 256 aa20.8■□□□□ 0.92
DDR1-261ENST00000507901 BCAR3O75815 825 aa20.8■□□□□ 0.92
DDR1-261ENST00000507901 RBM17Q96I25 401 aaKnown RBP20.8■□□□□ 0.92
DDR1-261ENST00000507901 UTYO14607 1347 aa20.79■□□□□ 0.92
DDR1-261ENST00000507901 KIF16BQ96L93 1317 aa20.79■□□□□ 0.92
DDR1-261ENST00000507901 NFKBIEO00221 500 aa20.79■□□□□ 0.92
DDR1-261ENST00000507901 PDE8AO60658 829 aa20.79■□□□□ 0.92
DDR1-261ENST00000507901 PRELPP51888 382 aa20.79■□□□□ 0.92
DDR1-261ENST00000507901 UBE3BQ7Z3V4 1068 aa20.79■□□□□ 0.92
DDR1-261ENST00000507901 SLC51AQ86UW1 340 aa20.79■□□□□ 0.92
DDR1-261ENST00000507901 CCDC88AQ3V6T2 1871 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms