RNA–Protein interactions for RNA: ENST00000507653.1

AC008539.1-201, humanhuman

TSL 3 BASIC

Gene AC008539.1, Length 482 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008539.1-201ENST00000507653 KRTAP9-3Q9BYQ3 159 aa6.53□□□□□ -1.36
AC008539.1-201ENST00000507653 ZMYND15Q9H091 742 aa6.53□□□□□ -1.36
AC008539.1-201ENST00000507653 POM121CA8CG34 1229 aa6.52□□□□□ -1.37
AC008539.1-201ENST00000507653 CDK2AP1O14519 115 aa6.52□□□□□ -1.37
AC008539.1-201ENST00000507653 STAU1O95793 577 aaKnown RBP6.52□□□□□ -1.37
AC008539.1-201ENST00000507653 PSME1Q06323 249 aa6.52□□□□□ -1.37
AC008539.1-201ENST00000507653 ARSJQ5FYB0 599 aaPredicted RBP6.52□□□□□ -1.37
AC008539.1-201ENST00000507653 TRIM50Q86XT4 487 aa6.52□□□□□ -1.37
AC008539.1-201ENST00000507653 HDGFL1Q5TGJ6 251 aa6.51□□□□□ -1.37
AC008539.1-201ENST00000507653 GLMNQ92990 594 aa6.51□□□□□ -1.37
AC008539.1-201ENST00000507653 NEUROD4Q9HD90 331 aa6.51□□□□□ -1.37
AC008539.1-201ENST00000507653 ZDHHC3Q9NYG2 299 aa6.51□□□□□ -1.37
AC008539.1-201ENST00000507653 CHMP3Q9Y3E7 222 aa6.51□□□□□ -1.37
AC008539.1-201ENST00000507653 RBM19Q9Y4C8 960 aaKnown RBP6.51□□□□□ -1.37
AC008539.1-201ENST00000507653 A6NJY4 79 aa6.5□□□□□ -1.37
AC008539.1-201ENST00000507653 SKIP12755 728 aa6.5□□□□□ -1.37
AC008539.1-201ENST00000507653 SLC4A9Q96Q91 983 aa6.5□□□□□ -1.37
AC008539.1-201ENST00000507653 SLC30A3Q99726 388 aa6.5□□□□□ -1.37
AC008539.1-201ENST00000507653 CABP1Q9NZU7 370 aa6.5□□□□□ -1.37
AC008539.1-201ENST00000507653 ATP9BO43861 1147 aa6.49□□□□□ -1.37
AC008539.1-201ENST00000507653 ATP1A2P50993 1020 aa6.49□□□□□ -1.37
AC008539.1-201ENST00000507653 SCNN1DP51172 638 aa6.49□□□□□ -1.37
AC008539.1-201ENST00000507653 BICDL1Q6ZP65 573 aa6.49□□□□□ -1.37
AC008539.1-201ENST00000507653 UCN2Q96RP3 112 aa6.49□□□□□ -1.37
AC008539.1-201ENST00000507653 SERTAD1Q9UHV2 236 aa6.49□□□□□ -1.37
AC008539.1-201ENST00000507653 GPC6Q9Y625 555 aaPredicted RBP6.49□□□□□ -1.37
AC008539.1-201ENST00000507653 DTX1Q86Y01 620 aa6.48□□□□□ -1.37
AC008539.1-201ENST00000507653 DZIP1LQ8IYY4 767 aaKnown RBP6.48□□□□□ -1.37
AC008539.1-201ENST00000507653 USP17L5A8MUK1 530 aa6.47□□□□□ -1.37
AC008539.1-201ENST00000507653 PIK3CDO00329 1044 aa6.47□□□□□ -1.37
AC008539.1-201ENST00000507653 GTF2IP78347 998 aa6.47□□□□□ -1.37
AC008539.1-201ENST00000507653 NEUROD1Q13562 356 aa6.47□□□□□ -1.37
AC008539.1-201ENST00000507653 MTFR1Q15390 333 aa6.47□□□□□ -1.37
AC008539.1-201ENST00000507653 DMRTC2Q8IXT2 367 aaPredicted RBP6.46□□□□□ -1.38
AC008539.1-201ENST00000507653 CALR3Q96L12 384 aaKnown RBP6.46□□□□□ -1.38
AC008539.1-201ENST00000507653 ZNF295-AS1Q8N0V1 137 aa6.45□□□□□ -1.38
AC008539.1-201ENST00000507653 JPH1Q9HDC5 661 aaPredicted RBP6.45□□□□□ -1.38
AC008539.1-201ENST00000507653 PCDHGA11Q9Y5H2 935 aa6.45□□□□□ -1.38
AC008539.1-201ENST00000507653 USP17L3A6NCW0 530 aa6.44□□□□□ -1.38
AC008539.1-201ENST00000507653 USP17L4A6NCW7 530 aa6.44□□□□□ -1.38
AC008539.1-201ENST00000507653 TMEM229AB2RXF0 380 aa6.44□□□□□ -1.38
AC008539.1-201ENST00000507653 WNT11O96014 354 aa6.44□□□□□ -1.38
AC008539.1-201ENST00000507653 IGLV1-40P01703 118 aa6.44□□□□□ -1.38
AC008539.1-201ENST00000507653 AFF1P51825 1210 aaKnown RBP6.44□□□□□ -1.38
AC008539.1-201ENST00000507653 NCOA4Q13772 614 aa6.44□□□□□ -1.38
AC008539.1-201ENST00000507653 USP17L2Q6R6M4 530 aa6.44□□□□□ -1.38
AC008539.1-201ENST00000507653 USP17L1Q7RTZ2 530 aa6.44□□□□□ -1.38
AC008539.1-201ENST00000507653 ZDHHC13Q8IUH4 622 aa6.44□□□□□ -1.38
AC008539.1-201ENST00000507653 PPP1R12CQ9BZL4 782 aa6.44□□□□□ -1.38
AC008539.1-201ENST00000507653 SCHIP1Q9P0W5 487 aaPredicted RBP6.44□□□□□ -1.38
AC008539.1-201ENST00000507653 ANKIB1Q9P2G1 1089 aa6.44□□□□□ -1.38
AC008539.1-201ENST00000507653 ZNF232Q9UNY5 417 aa6.44□□□□□ -1.38
AC008539.1-201ENST00000507653 MAFBQ9Y5Q3 323 aaPredicted RBP6.44□□□□□ -1.38
AC008539.1-201ENST00000507653 PALM3A6NDB9 673 aaPredicted RBP6.43□□□□□ -1.38
AC008539.1-201ENST00000507653 M0R2N6 131 aa6.43□□□□□ -1.38
AC008539.1-201ENST00000507653 SFSWAPQ12872 951 aaKnown RBP6.43□□□□□ -1.38
AC008539.1-201ENST00000507653 TEAD4Q15561 434 aa6.43□□□□□ -1.38
AC008539.1-201ENST00000507653 HIF1AQ16665 826 aa6.43□□□□□ -1.38
AC008539.1-201ENST00000507653 RAB44Q7Z6P3 723 aaPredicted RBP6.43□□□□□ -1.38
AC008539.1-201ENST00000507653 ABI1Q8IZP0 508 aa6.43□□□□□ -1.38
AC008539.1-201ENST00000507653 SERTM1A2A2V5 107 aa6.42□□□□□ -1.38
AC008539.1-201ENST00000507653 INTS5Q6P9B9 1019 aaKnown RBP6.42□□□□□ -1.38
AC008539.1-201ENST00000507653 FBXO11Q86XK2 927 aa6.42□□□□□ -1.38
AC008539.1-201ENST00000507653 SIX5Q8N196 739 aa6.42□□□□□ -1.38
AC008539.1-201ENST00000507653 LARGE2Q8N3Y3 721 aa6.42□□□□□ -1.38
AC008539.1-201ENST00000507653 NUDT8Q8WV74 236 aa6.42□□□□□ -1.38
AC008539.1-201ENST00000507653 L3MBTL2Q969R5 705 aa6.42□□□□□ -1.38
AC008539.1-201ENST00000507653 ZNF358Q9NW07 568 aa6.42□□□□□ -1.38
AC008539.1-201ENST00000507653 IQSEC3Q9UPP2 1182 aaPredicted RBP6.42□□□□□ -1.38
AC008539.1-201ENST00000507653 DBX1A6NMT0 343 aa6.41□□□□□ -1.38
AC008539.1-201ENST00000507653 GSC2O15499 205 aa6.41□□□□□ -1.38
AC008539.1-201ENST00000507653 PTCD1O75127 700 aaKnown RBP6.41□□□□□ -1.38
AC008539.1-201ENST00000507653 ZNF865P0CJ78 1059 aaPredicted RBP6.41□□□□□ -1.38
AC008539.1-201ENST00000507653 NOS2P35228 1153 aa6.41□□□□□ -1.38
AC008539.1-201ENST00000507653 TFIP11Q9UBB9 837 aaKnown RBP6.41□□□□□ -1.38
AC008539.1-201ENST00000507653 NCANO14594 1321 aa6.41□□□□□ -1.38
AC008539.1-201ENST00000507653 PSMA6P60900 246 aaKnown RBP6.4□□□□□ -1.38
AC008539.1-201ENST00000507653 SPEM2Q0P670 501 aa6.4□□□□□ -1.38
AC008539.1-201ENST00000507653 IGF2-ASQ6U949 168 aa6.4□□□□□ -1.38
AC008539.1-201ENST00000507653 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.4□□□□□ -1.38
AC008539.1-201ENST00000507653 ASIC4Q96FT7 647 aa6.4□□□□□ -1.38
AC008539.1-201ENST00000507653 ZNF777Q9ULD5 760 aaPredicted RBP6.4□□□□□ -1.38
AC008539.1-201ENST00000507653 FAM196BA6NMK8 535 aa6.39□□□□□ -1.39
AC008539.1-201ENST00000507653 ZBTB7BO15156 539 aaPredicted RBP6.39□□□□□ -1.39
AC008539.1-201ENST00000507653 CFAP70Q5T0N1 1121 aa6.39□□□□□ -1.39
AC008539.1-201ENST00000507653 KANK4Q5T7N3 995 aaPredicted RBP6.39□□□□□ -1.39
AC008539.1-201ENST00000507653 C1orf53Q5VUE5 145 aa6.39□□□□□ -1.39
AC008539.1-201ENST00000507653 CCDC102BQ68D86 513 aa6.39□□□□□ -1.39
AC008539.1-201ENST00000507653 C14orf37Q86TY3 774 aa6.39□□□□□ -1.39
AC008539.1-201ENST00000507653 SLC9A9Q8IVB4 645 aa6.39□□□□□ -1.39
AC008539.1-201ENST00000507653 DTWD1Q8N5C7 304 aa6.39□□□□□ -1.39
AC008539.1-201ENST00000507653 TPCN2Q8NHX9 752 aa6.39□□□□□ -1.39
AC008539.1-201ENST00000507653 RHPN1Q8TCX5 695 aa6.39□□□□□ -1.39
AC008539.1-201ENST00000507653 MKRN1Q9UHC7 482 aaKnown RBP6.39□□□□□ -1.39
AC008539.1-201ENST00000507653 SERPINA10Q9UK55 444 aa6.39□□□□□ -1.39
AC008539.1-201ENST00000507653 DKK1O94907 266 aa6.38□□□□□ -1.39
AC008539.1-201ENST00000507653 GRIK1P39086 918 aa6.38□□□□□ -1.39
AC008539.1-201ENST00000507653 CLDN10P78369 228 aa6.38□□□□□ -1.39
AC008539.1-201ENST00000507653 ZNF124Q15973 351 aa6.38□□□□□ -1.39
AC008539.1-201ENST00000507653 CBLL1Q75N03 491 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms