RNA–Protein interactions for RNA: ENST00000507355.5

POLR2J3-212, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-212ENST00000507355 LTBP1Q14766 1721 aa17.75■□□□□ 0.43
POLR2J3-212ENST00000507355 COL4A5P29400 1685 aa17.74■□□□□ 0.43
POLR2J3-212ENST00000507355 THSD7BQ9C0I4 1608 aa17.74■□□□□ 0.43
POLR2J3-212ENST00000507355 CCDC85CA6NKD9 419 aa17.74■□□□□ 0.43
POLR2J3-212ENST00000507355 LMOD1P29536 600 aaPredicted RBP17.74■□□□□ 0.43
POLR2J3-212ENST00000507355 HLFQ16534 295 aa17.74■□□□□ 0.43
POLR2J3-212ENST00000507355 PNISRQ8TF01 805 aaKnown RBP17.74■□□□□ 0.43
POLR2J3-212ENST00000507355 PLEKHF1Q96S99 279 aa17.74■□□□□ 0.43
POLR2J3-212ENST00000507355 ALDH1B1P30837 517 aa17.73■□□□□ 0.43
POLR2J3-212ENST00000507355 EIF6P56537 245 aaKnown RBP17.73■□□□□ 0.43
POLR2J3-212ENST00000507355 NGEFQ8N5V2 710 aa17.73■□□□□ 0.43
POLR2J3-212ENST00000507355 CAPNS2Q96L46 248 aa17.73■□□□□ 0.43
POLR2J3-212ENST00000507355 BEGAINQ9BUH8 593 aa17.73■□□□□ 0.43
POLR2J3-212ENST00000507355 ABCC12Q96J65 1359 aa17.73■□□□□ 0.43
POLR2J3-212ENST00000507355 RGL2O15211 777 aa17.72■□□□□ 0.43
POLR2J3-212ENST00000507355 NFE2L2Q16236 605 aa17.72■□□□□ 0.43
POLR2J3-212ENST00000507355 CYP4F22Q6NT55 531 aa17.72■□□□□ 0.43
POLR2J3-212ENST00000507355 PSMD1Q99460 953 aa17.72■□□□□ 0.43
POLR2J3-212ENST00000507355 THUMPD2Q9BTF0 503 aaKnown RBP17.72■□□□□ 0.43
POLR2J3-212ENST00000507355 TSKSQ9UJT2 592 aa17.72■□□□□ 0.43
POLR2J3-212ENST00000507355 SNED1Q8TER0 1413 aa17.72■□□□□ 0.43
POLR2J3-212ENST00000507355 DLG5Q8TDM6 1919 aa17.71■□□□□ 0.43
POLR2J3-212ENST00000507355 TRAF5O00463 557 aa17.71■□□□□ 0.43
POLR2J3-212ENST00000507355 EPS15P42566 896 aa17.71■□□□□ 0.43
POLR2J3-212ENST00000507355 EIF4A1P60842 406 aaKnown RBP17.71■□□□□ 0.43
POLR2J3-212ENST00000507355 NUTM1Q86Y26 1132 aa17.71■□□□□ 0.43
POLR2J3-212ENST00000507355 RRP7AQ9Y3A4 280 aaKnown RBP17.71■□□□□ 0.43
POLR2J3-212ENST00000507355 TRPM7Q96QT4 1865 aa17.71■□□□□ 0.43
POLR2J3-212ENST00000507355 ECE1P42892 770 aa17.7■□□□□ 0.42
POLR2J3-212ENST00000507355 SCNN1DP51172 638 aa17.7■□□□□ 0.42
POLR2J3-212ENST00000507355 MLLT1Q03111 559 aaPredicted RBP17.7■□□□□ 0.42
POLR2J3-212ENST00000507355 MAPK8IP2Q13387 824 aaPredicted RBP17.7■□□□□ 0.42
POLR2J3-212ENST00000507355 SLC51AQ86UW1 340 aa17.7■□□□□ 0.42
POLR2J3-212ENST00000507355 GPR101Q96P66 508 aaPredicted RBP17.7■□□□□ 0.42
POLR2J3-212ENST00000507355 PNNQ9H307 717 aaKnown RBP17.7■□□□□ 0.42
POLR2J3-212ENST00000507355 LARGE2Q8N3Y3 721 aa17.69■□□□□ 0.42
POLR2J3-212ENST00000507355 RPGRQ92834 1020 aaKnown RBP17.69■□□□□ 0.42
POLR2J3-212ENST00000507355 LAMB4A4D0S4 1761 aa17.68■□□□□ 0.42
POLR2J3-212ENST00000507355 ERVV-1B6SEH8 477 aa17.68■□□□□ 0.42
POLR2J3-212ENST00000507355 TCERG1O14776 1098 aaKnown RBP17.68■□□□□ 0.42
POLR2J3-212ENST00000507355 MYL6BP14649 208 aa17.68■□□□□ 0.42
POLR2J3-212ENST00000507355 CRY2Q49AN0 593 aa17.68■□□□□ 0.42
POLR2J3-212ENST00000507355 CST9Q5W186 159 aa17.68■□□□□ 0.42
POLR2J3-212ENST00000507355 TTLL7Q6ZT98 887 aa17.68■□□□□ 0.42
POLR2J3-212ENST00000507355 CFAP44Q96MT7 982 aa17.68■□□□□ 0.42
POLR2J3-212ENST00000507355 MAPK8IP3Q9UPT6 1336 aa17.68■□□□□ 0.42
POLR2J3-212ENST00000507355 AOC2O75106 756 aa17.67■□□□□ 0.42
POLR2J3-212ENST00000507355 NYXQ9GZU5 481 aa17.67■□□□□ 0.42
POLR2J3-212ENST00000507355 NUP98P52948 1817 aa17.66■□□□□ 0.42
POLR2J3-212ENST00000507355 CC2D2BQ6DHV5 1058 aa17.66■□□□□ 0.42
POLR2J3-212ENST00000507355 TLL2Q9Y6L7 1015 aa17.66■□□□□ 0.42
POLR2J3-212ENST00000507355 MAP3K15Q6ZN16 1313 aa17.66■□□□□ 0.42
POLR2J3-212ENST00000507355 GPTP24298 496 aa17.65■□□□□ 0.42
POLR2J3-212ENST00000507355 KIF6Q6ZMV9 814 aa17.65■□□□□ 0.42
POLR2J3-212ENST00000507355 USP50Q70EL3 339 aaPredicted RBP17.65■□□□□ 0.42
POLR2J3-212ENST00000507355 NIM1KQ8IY84 436 aa17.65■□□□□ 0.42
POLR2J3-212ENST00000507355 KDM3BQ7LBC6 1761 aa17.65■□□□□ 0.42
POLR2J3-212ENST00000507355 PPEF1O14829 653 aaPredicted RBP17.64■□□□□ 0.41
POLR2J3-212ENST00000507355 RIPK4P57078 832 aa17.64■□□□□ 0.41
POLR2J3-212ENST00000507355 ZBTB3Q9H5J0 574 aa17.64■□□□□ 0.41
POLR2J3-212ENST00000507355 PPIP5K2O43314 1243 aa17.63■□□□□ 0.41
POLR2J3-212ENST00000507355 RALBP1Q15311 655 aa17.63■□□□□ 0.41
POLR2J3-212ENST00000507355 TSPYL4Q9UJ04 414 aa17.63■□□□□ 0.41
POLR2J3-212ENST00000507355 CASP8AP2Q9UKL3 1982 aa17.62■□□□□ 0.41
POLR2J3-212ENST00000507355 CELF2O95319 508 aaKnown RBP17.62■□□□□ 0.41
POLR2J3-212ENST00000507355 EIF2S2P20042 333 aaKnown RBP17.62■□□□□ 0.41
POLR2J3-212ENST00000507355 HOXA10P31260 410 aaPredicted RBP17.62■□□□□ 0.41
POLR2J3-212ENST00000507355 AOC3Q16853 763 aa17.62■□□□□ 0.41
POLR2J3-212ENST00000507355 SUSD4Q5VX71 490 aa17.62■□□□□ 0.41
POLR2J3-212ENST00000507355 RBM17Q96I25 401 aaKnown RBP17.62■□□□□ 0.41
POLR2J3-212ENST00000507355 ZNF408Q9H9D4 720 aa17.62■□□□□ 0.41
POLR2J3-212ENST00000507355 ADARB2Q9NS39 739 aaKnown RBP17.62■□□□□ 0.41
POLR2J3-212ENST00000507355 GPRC5DQ9NZD1 345 aa17.62■□□□□ 0.41
POLR2J3-212ENST00000507355 UBN2Q6ZU65 1347 aa17.62■□□□□ 0.41
POLR2J3-212ENST00000507355 RIC1Q4ADV7 1423 aa17.62■□□□□ 0.41
POLR2J3-212ENST00000507355 MAP2K2P36507 400 aa17.61■□□□□ 0.41
POLR2J3-212ENST00000507355 RGS19P49795 217 aa17.61■□□□□ 0.41
POLR2J3-212ENST00000507355 GIGYF2Q6Y7W6 1299 aaKnown RBP17.61■□□□□ 0.41
POLR2J3-212ENST00000507355 C3orf67Q6ZVT6 689 aa17.61■□□□□ 0.41
POLR2J3-212ENST00000507355 SAPCD2Q86UD0 394 aa17.61■□□□□ 0.41
POLR2J3-212ENST00000507355 ZNF34Q8IZ26 560 aa17.61■□□□□ 0.41
POLR2J3-212ENST00000507355 MCOLN1Q9GZU1 580 aa17.61■□□□□ 0.41
POLR2J3-212ENST00000507355 TMPOP42166 694 aaKnown RBP17.6■□□□□ 0.41
POLR2J3-212ENST00000507355 GRIPAP1Q4V328 841 aa17.6■□□□□ 0.41
POLR2J3-212ENST00000507355 GLIS2Q9BZE0 524 aaPredicted RBP17.6■□□□□ 0.41
POLR2J3-212ENST00000507355 ERBB4Q15303 1308 aa17.6■□□□□ 0.41
POLR2J3-212ENST00000507355 IBTKQ9P2D0 1353 aaPredicted RBP17.6■□□□□ 0.41
POLR2J3-212ENST00000507355 GMPSP49915 693 aaPredicted RBP17.59■□□□□ 0.41
POLR2J3-212ENST00000507355 DDX10Q13206 875 aaKnown RBP17.59■□□□□ 0.41
POLR2J3-212ENST00000507355 PDIA6Q15084 440 aa17.59■□□□□ 0.41
POLR2J3-212ENST00000507355 CRAMP1Q96RY5 1269 aa17.59■□□□□ 0.41
POLR2J3-212ENST00000507355 TMX4Q9H1E5 349 aaPredicted RBP17.59■□□□□ 0.41
POLR2J3-212ENST00000507355 TNRC18O15417 2968 aaPredicted RBP17.58■□□□□ 0.4
POLR2J3-212ENST00000507355 CA12O43570 354 aa17.58■□□□□ 0.4
POLR2J3-212ENST00000507355 LRP10Q7Z4F1 713 aa17.58■□□□□ 0.4
POLR2J3-212ENST00000507355 BABAM1Q9NWV8 329 aa17.58■□□□□ 0.4
POLR2J3-212ENST00000507355 NTSR2O95665 410 aa17.57■□□□□ 0.4
POLR2J3-212ENST00000507355 ANXA1P04083 346 aa17.57■□□□□ 0.4
POLR2J3-212ENST00000507355 BRPF1P55201 1214 aaPredicted RBP17.57■□□□□ 0.4
POLR2J3-212ENST00000507355 CXCL9Q07325 125 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms