RNA–Protein interactions for RNA: ENST00000506963.1

SFXN1-205, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 796 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-205ENST00000506963 UTP14AQ9BVJ6 771 aaKnown RBP12.39□□□□□ -0.43
SFXN1-205ENST00000506963 BCL2L13Q9BXK5 485 aa12.39□□□□□ -0.43
SFXN1-205ENST00000506963 BRCA1P38398 1863 aaKnown RBP12.38□□□□□ -0.43
SFXN1-205ENST00000506963 ATP5J2-PTCD1G3V325 749 aa12.38□□□□□ -0.43
SFXN1-205ENST00000506963 ST5P78524 1137 aa12.38□□□□□ -0.43
SFXN1-205ENST00000506963 BEND3Q5T5X7 828 aa12.38□□□□□ -0.43
SFXN1-205ENST00000506963 MYD88Q99836 296 aa12.38□□□□□ -0.43
SFXN1-205ENST00000506963 SH3TC1Q8TE82 1336 aa12.37□□□□□ -0.43
SFXN1-205ENST00000506963 NEURL1BA8MQ27 555 aa12.37□□□□□ -0.43
SFXN1-205ENST00000506963 F6X3S4 739 aa12.37□□□□□ -0.43
SFXN1-205ENST00000506963 ALDH1L1O75891 902 aa12.37□□□□□ -0.43
SFXN1-205ENST00000506963 PDE6BP35913 854 aa12.37□□□□□ -0.43
SFXN1-205ENST00000506963 ZBTB38Q8NAP3 1195 aaPredicted RBP12.37□□□□□ -0.43
SFXN1-205ENST00000506963 YTHDC1Q96MU7 727 aaKnown RBP12.37□□□□□ -0.43
SFXN1-205ENST00000506963 API5Q9BZZ5 524 aaKnown RBP12.37□□□□□ -0.43
SFXN1-205ENST00000506963 CWC25Q9NXE8 425 aaPredicted RBP12.37□□□□□ -0.43
SFXN1-205ENST00000506963 NOB1Q9ULX3 412 aaKnown RBP12.37□□□□□ -0.43
SFXN1-205ENST00000506963 ABCC12Q96J65 1359 aa12.37□□□□□ -0.43
SFXN1-205ENST00000506963 LAMB2P55268 1798 aa12.37□□□□□ -0.43
SFXN1-205ENST00000506963 CDHR2Q9BYE9 1310 aa12.37□□□□□ -0.43
SFXN1-205ENST00000506963 IPO8O15397 1037 aaKnown RBP12.36□□□□□ -0.43
SFXN1-205ENST00000506963 BCAR3O75815 825 aa12.36□□□□□ -0.43
SFXN1-205ENST00000506963 PCCAP05165 728 aaPredicted RBP12.36□□□□□ -0.43
SFXN1-205ENST00000506963 CRY2Q49AN0 593 aa12.36□□□□□ -0.43
SFXN1-205ENST00000506963 ERFEQ4G0M1 354 aa12.36□□□□□ -0.43
SFXN1-205ENST00000506963 NLGN2Q8NFZ4 835 aa12.36□□□□□ -0.43
SFXN1-205ENST00000506963 TRMT112Q9UI30 125 aaKnown RBP12.36□□□□□ -0.43
SFXN1-205ENST00000506963 SRCAPQ6ZRS2 3230 aa12.35□□□□□ -0.43
SFXN1-205ENST00000506963 TNRC6CQ9HCJ0 1690 aaKnown RBP12.35□□□□□ -0.43
SFXN1-205ENST00000506963 COL11A2P13942 1736 aaPredicted RBP12.35□□□□□ -0.43
SFXN1-205ENST00000506963 DDX60Q8IY21 1712 aaKnown RBP12.35□□□□□ -0.43
SFXN1-205ENST00000506963 H7C1W4 665 aa12.35□□□□□ -0.43
SFXN1-205ENST00000506963 SRGNP10124 158 aa12.35□□□□□ -0.43
SFXN1-205ENST00000506963 HSP90B1P14625 803 aaKnown RBP12.35□□□□□ -0.43
SFXN1-205ENST00000506963 KCNA3P22001 575 aa12.35□□□□□ -0.43
SFXN1-205ENST00000506963 GTF2E1P29083 439 aaPredicted RBP12.35□□□□□ -0.43
SFXN1-205ENST00000506963 GCKRQ14397 625 aa12.35□□□□□ -0.43
SFXN1-205ENST00000506963 CWF19L2Q2TBE0 894 aaKnown RBP12.35□□□□□ -0.43
SFXN1-205ENST00000506963 NUTM1Q86Y26 1132 aa12.35□□□□□ -0.43
SFXN1-205ENST00000506963 SRCIN1Q9C0H9 1055 aa12.35□□□□□ -0.43
SFXN1-205ENST00000506963 ABCC4O15439 1325 aa12.35□□□□□ -0.43
SFXN1-205ENST00000506963 FAM177BA6PVY3 158 aa12.34□□□□□ -0.43
SFXN1-205ENST00000506963 NPHP1O15259 732 aa12.34□□□□□ -0.43
SFXN1-205ENST00000506963 DPEP1P16444 411 aa12.34□□□□□ -0.43
SFXN1-205ENST00000506963 ATF7IPQ6VMQ6 1270 aa12.34□□□□□ -0.43
SFXN1-205ENST00000506963 KLHL34Q8N239 644 aa12.34□□□□□ -0.43
SFXN1-205ENST00000506963 RCAN3Q9UKA8 241 aa12.34□□□□□ -0.43
SFXN1-205ENST00000506963 UTYO14607 1347 aa12.34□□□□□ -0.43
SFXN1-205ENST00000506963 H0YIN7 160 aa12.33□□□□□ -0.44
SFXN1-205ENST00000506963 TRIM27P14373 513 aa12.33□□□□□ -0.44
SFXN1-205ENST00000506963 HOXA10P31260 410 aaPredicted RBP12.33□□□□□ -0.44
SFXN1-205ENST00000506963 CCT4P50991 539 aaKnown RBP12.33□□□□□ -0.44
SFXN1-205ENST00000506963 CASP7P55210 303 aa12.33□□□□□ -0.44
SFXN1-205ENST00000506963 ZKSCAN2Q63HK3 967 aa12.33□□□□□ -0.44
SFXN1-205ENST00000506963 STYK1Q6J9G0 422 aa12.33□□□□□ -0.44
SFXN1-205ENST00000506963 C2CD5Q86YS7 1000 aa12.33□□□□□ -0.44
SFXN1-205ENST00000506963 CCDC24Q8N4L8 307 aa12.33□□□□□ -0.44
SFXN1-205ENST00000506963 FAM89AQ96GI7 184 aa12.33□□□□□ -0.44
SFXN1-205ENST00000506963 PLA2G12BQ9BX93 195 aa12.33□□□□□ -0.44
SFXN1-205ENST00000506963 ARFGEF1Q9Y6D6 1849 aa12.32□□□□□ -0.44
SFXN1-205ENST00000506963 A0A0G2JLW4 131 aa12.32□□□□□ -0.44
SFXN1-205ENST00000506963 IRS4O14654 1257 aaPredicted RBP12.32□□□□□ -0.44
SFXN1-205ENST00000506963 NPR1P16066 1061 aa12.32□□□□□ -0.44
SFXN1-205ENST00000506963 CHRNA5P30532 468 aa12.32□□□□□ -0.44
SFXN1-205ENST00000506963 SF3B3Q15393 1217 aaKnown RBP12.32□□□□□ -0.44
SFXN1-205ENST00000506963 INTS3Q68E01 1043 aaKnown RBP12.32□□□□□ -0.44
SFXN1-205ENST00000506963 SLC4A10Q6U841 1118 aa12.32□□□□□ -0.44
SFXN1-205ENST00000506963 SYNE4Q8N205 404 aa12.32□□□□□ -0.44
SFXN1-205ENST00000506963 MASTLQ96GX5 879 aa12.32□□□□□ -0.44
SFXN1-205ENST00000506963 NLRP3Q96P20 1036 aa12.32□□□□□ -0.44
SFXN1-205ENST00000506963 PIM2Q9P1W9 311 aa12.32□□□□□ -0.44
SFXN1-205ENST00000506963 MYH3P11055 1940 aa12.31□□□□□ -0.44
SFXN1-205ENST00000506963 GRM8O00222 908 aa12.31□□□□□ -0.44
SFXN1-205ENST00000506963 C3orf67Q6ZVT6 689 aa12.31□□□□□ -0.44
SFXN1-205ENST00000506963 CNKSR1Q969H4 720 aa12.31□□□□□ -0.44
SFXN1-205ENST00000506963 PDE8AO60658 829 aa12.3□□□□□ -0.44
SFXN1-205ENST00000506963 HCLS1P14317 486 aaPredicted RBP12.3□□□□□ -0.44
SFXN1-205ENST00000506963 UBE3BQ7Z3V4 1068 aa12.3□□□□□ -0.44
SFXN1-205ENST00000506963 FRAT1Q92837 279 aaPredicted RBP12.3□□□□□ -0.44
SFXN1-205ENST00000506963 CRAMP1Q96RY5 1269 aa12.3□□□□□ -0.44
SFXN1-205ENST00000506963 USP44Q9H0E7 712 aa12.3□□□□□ -0.44
SFXN1-205ENST00000506963 RTL9Q8NET4 1388 aa12.3□□□□□ -0.44
SFXN1-205ENST00000506963 ALDH1B1P30837 517 aa12.29□□□□□ -0.44
SFXN1-205ENST00000506963 DALRD3Q5D0E6 543 aaKnown RBP12.29□□□□□ -0.44
SFXN1-205ENST00000506963 TTLL6Q8N841 843 aa12.29□□□□□ -0.44
SFXN1-205ENST00000506963 C9orf78Q9NZ63 289 aaPredicted RBP12.29□□□□□ -0.44
SFXN1-205ENST00000506963 SLX4Q8IY92 1834 aa12.28□□□□□ -0.44
SFXN1-205ENST00000506963 CSF1RP07333 972 aa12.28□□□□□ -0.44
SFXN1-205ENST00000506963 MS4A1P11836 297 aa12.28□□□□□ -0.44
SFXN1-205ENST00000506963 CTSWP56202 376 aa12.28□□□□□ -0.44
SFXN1-205ENST00000506963 RTL5Q5HYW3 569 aaPredicted RBP12.28□□□□□ -0.44
SFXN1-205ENST00000506963 DZIP1LQ8IYY4 767 aaKnown RBP12.28□□□□□ -0.44
SFXN1-205ENST00000506963 C7orf43Q8WVR3 580 aa12.28□□□□□ -0.44
SFXN1-205ENST00000506963 RBM17Q96I25 401 aaKnown RBP12.28□□□□□ -0.44
SFXN1-205ENST00000506963 GRIN3BO60391 1043 aa12.27□□□□□ -0.45
SFXN1-205ENST00000506963 NBPF7P0C2Y1 421 aaPredicted RBP12.27□□□□□ -0.45
SFXN1-205ENST00000506963 YBX3P16989 372 aaKnown RBP eCLIP12.27□□□□□ -0.458e-9■□□□□ 10.8
SFXN1-205ENST00000506963 TTLL11Q8NHH1 800 aa12.27□□□□□ -0.45
SFXN1-205ENST00000506963 JARID2Q92833 1246 aaPredicted RBP12.27□□□□□ -0.45
SFXN1-205ENST00000506963 RPGRQ92834 1020 aaKnown RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms