RNA–Protein interactions for RNA: ENST00000506929.1

CDC42SE2-210, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 410 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-210ENST00000506929 C1orf229Q6ZS94 237 aaPredicted RBP6.66□□□□□ -1.34
CDC42SE2-210ENST00000506929 TREML1Q86YW5 311 aa6.66□□□□□ -1.34
CDC42SE2-210ENST00000506929 COL26A1Q96A83 441 aa6.66□□□□□ -1.34
CDC42SE2-210ENST00000506929 OXCT2Q9BYC2 517 aaPredicted RBP6.66□□□□□ -1.34
CDC42SE2-210ENST00000506929 BRD7Q9NPI1 651 aa6.66□□□□□ -1.34
CDC42SE2-210ENST00000506929 TGFBR3LH3BV60 316 aa6.65□□□□□ -1.34
CDC42SE2-210ENST00000506929 INPP5BP32019 993 aa6.65□□□□□ -1.34
CDC42SE2-210ENST00000506929 GDF2Q9UK05 429 aaPredicted RBP6.65□□□□□ -1.34
CDC42SE2-210ENST00000506929 OIP5O43482 229 aa6.64□□□□□ -1.35
CDC42SE2-210ENST00000506929 PTCD1O75127 700 aaKnown RBP6.64□□□□□ -1.35
CDC42SE2-210ENST00000506929 ABL1P00519 1130 aa6.64□□□□□ -1.35
CDC42SE2-210ENST00000506929 MARSP56192 900 aaKnown RBP6.64□□□□□ -1.35
CDC42SE2-210ENST00000506929 FAM182BQ5T319 152 aa6.64□□□□□ -1.35
CDC42SE2-210ENST00000506929 MARK1Q9P0L2 795 aa6.64□□□□□ -1.35
CDC42SE2-210ENST00000506929 ANKIB1Q9P2G1 1089 aa6.64□□□□□ -1.35
CDC42SE2-210ENST00000506929 RNF225M0QZC1 329 aaPredicted RBP6.63□□□□□ -1.35
CDC42SE2-210ENST00000506929 MPSTP25325 297 aa6.63□□□□□ -1.35
CDC42SE2-210ENST00000506929 PCBP4P57723 403 aaKnown RBP6.63□□□□□ -1.35
CDC42SE2-210ENST00000506929 LAMC2Q13753 1193 aa6.63□□□□□ -1.35
CDC42SE2-210ENST00000506929 ECM1Q16610 540 aa6.63□□□□□ -1.35
CDC42SE2-210ENST00000506929 TXNDC2Q86VQ3 553 aa6.63□□□□□ -1.35
CDC42SE2-210ENST00000506929 RGL4Q8IZJ4 473 aa6.63□□□□□ -1.35
CDC42SE2-210ENST00000506929 GOLGA6L1Q8N7Z2 621 aa6.63□□□□□ -1.35
CDC42SE2-210ENST00000506929 KCNMA1Q12791 1236 aa6.62□□□□□ -1.35
CDC42SE2-210ENST00000506929 IER5Q5VY09 327 aa6.62□□□□□ -1.35
CDC42SE2-210ENST00000506929 NEDD1Q8NHV4 660 aa6.62□□□□□ -1.35
CDC42SE2-210ENST00000506929 HELQQ8TDG4 1101 aa6.62□□□□□ -1.35
CDC42SE2-210ENST00000506929 SCARF2Q96GP6 870 aaPredicted RBP6.62□□□□□ -1.35
CDC42SE2-210ENST00000506929 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.62□□□□□ -1.35
CDC42SE2-210ENST00000506929 STIM2Q9P246 746 aa6.62□□□□□ -1.35
CDC42SE2-210ENST00000506929 KCNH4Q9UQ05 1017 aa6.62□□□□□ -1.35
CDC42SE2-210ENST00000506929 ARAFP10398 606 aa6.61□□□□□ -1.35
CDC42SE2-210ENST00000506929 BRD2P25440 801 aaKnown RBP6.61□□□□□ -1.35
CDC42SE2-210ENST00000506929 SPEM2Q0P670 501 aa6.61□□□□□ -1.35
CDC42SE2-210ENST00000506929 TRIP4Q15650 581 aaPredicted RBP6.61□□□□□ -1.35
CDC42SE2-210ENST00000506929 SLCO4C1Q6ZQN7 724 aa6.61□□□□□ -1.35
CDC42SE2-210ENST00000506929 KRT25Q7Z3Z0 450 aa6.61□□□□□ -1.35
CDC42SE2-210ENST00000506929 CMTR1Q8N1G2 835 aaKnown RBP6.61□□□□□ -1.35
CDC42SE2-210ENST00000506929 GGA1Q9UJY5 639 aa6.61□□□□□ -1.35
CDC42SE2-210ENST00000506929 RTCBQ9Y3I0 505 aaKnown RBP6.61□□□□□ -1.35
CDC42SE2-210ENST00000506929 A6NHS1 94 aa6.6□□□□□ -1.35
CDC42SE2-210ENST00000506929 NEURL1BA8MQ27 555 aa6.6□□□□□ -1.35
CDC42SE2-210ENST00000506929 SHISA8B8ZZ34 492 aa6.6□□□□□ -1.35
CDC42SE2-210ENST00000506929 ZAP70P43403 619 aa6.6□□□□□ -1.35
CDC42SE2-210ENST00000506929 KCNQ4P56696 695 aa6.6□□□□□ -1.35
CDC42SE2-210ENST00000506929 HIF1AQ16665 826 aa6.6□□□□□ -1.35
CDC42SE2-210ENST00000506929 GALNT6Q8NCL4 622 aa6.6□□□□□ -1.35
CDC42SE2-210ENST00000506929 GPR152Q8TDT2 470 aa6.6□□□□□ -1.35
CDC42SE2-210ENST00000506929 GSX2Q9BZM3 304 aa6.6□□□□□ -1.35
CDC42SE2-210ENST00000506929 AVENQ9NQS1 362 aaPredicted RBP6.6□□□□□ -1.35
CDC42SE2-210ENST00000506929 ZFATQ9P243 1243 aa6.6□□□□□ -1.35
CDC42SE2-210ENST00000506929 PRR12Q9ULL5 1215 aa6.6□□□□□ -1.35
CDC42SE2-210ENST00000506929 KCNMB2Q9Y691 235 aa6.6□□□□□ -1.35
CDC42SE2-210ENST00000506929 SASH3O75995 380 aa6.59□□□□□ -1.35
CDC42SE2-210ENST00000506929 TARSP26639 723 aaKnown RBP6.59□□□□□ -1.35
CDC42SE2-210ENST00000506929 ADH6P28332 368 aa6.59□□□□□ -1.35
CDC42SE2-210ENST00000506929 ARID4AP29374 1257 aaPredicted RBP6.59□□□□□ -1.35
CDC42SE2-210ENST00000506929 EIF1AXP47813 144 aaKnown RBP6.59□□□□□ -1.35
CDC42SE2-210ENST00000506929 ARSDP51689 593 aa6.59□□□□□ -1.35
CDC42SE2-210ENST00000506929 PODNQ7Z5L7 613 aa6.59□□□□□ -1.35
CDC42SE2-210ENST00000506929 SYT9Q86SS6 491 aa6.59□□□□□ -1.35
CDC42SE2-210ENST00000506929 FCHSD1Q86WN1 690 aa6.59□□□□□ -1.35
CDC42SE2-210ENST00000506929 EDARADDQ8WWZ3 215 aa6.59□□□□□ -1.35
CDC42SE2-210ENST00000506929 BHMTQ93088 406 aa6.59□□□□□ -1.35
CDC42SE2-210ENST00000506929 TRAIPQ9BWF2 469 aa6.59□□□□□ -1.35
CDC42SE2-210ENST00000506929 ZNF468Q5VIY5 522 aaPredicted RBP6.58□□□□□ -1.36
CDC42SE2-210ENST00000506929 BEND7Q8N7W2 519 aaPredicted RBP6.58□□□□□ -1.36
CDC42SE2-210ENST00000506929 EDEM1Q92611 657 aa6.58□□□□□ -1.36
CDC42SE2-210ENST00000506929 GGNBP2Q9H3C7 697 aa6.58□□□□□ -1.36
CDC42SE2-210ENST00000506929 CCDC87Q9NVE4 849 aa6.58□□□□□ -1.36
CDC42SE2-210ENST00000506929 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.58□□□□□ -1.36
CDC42SE2-210ENST00000506929 PHF20L1A8MW92 1017 aa6.57□□□□□ -1.36
CDC42SE2-210ENST00000506929 H3BRB1 525 aa6.57□□□□□ -1.36
CDC42SE2-210ENST00000506929 ICMTO60725 284 aa6.57□□□□□ -1.36
CDC42SE2-210ENST00000506929 BRD1O95696 1058 aa6.57□□□□□ -1.36
CDC42SE2-210ENST00000506929 EPXP11678 715 aa6.57□□□□□ -1.36
CDC42SE2-210ENST00000506929 NFKB1P19838 968 aa6.57□□□□□ -1.36
CDC42SE2-210ENST00000506929 IRS1P35568 1242 aa6.57□□□□□ -1.36
CDC42SE2-210ENST00000506929 GSK3AP49840 483 aa6.57□□□□□ -1.36
CDC42SE2-210ENST00000506929 FKBP4Q02790 459 aaKnown RBP eCLIP6.57□□□□□ -1.36
CDC42SE2-210ENST00000506929 RASSF7Q02833 373 aa6.57□□□□□ -1.36
CDC42SE2-210ENST00000506929 KANK3Q6NY19 840 aa6.57□□□□□ -1.36
CDC42SE2-210ENST00000506929 TMEM151AQ8N4L1 468 aa6.57□□□□□ -1.36
CDC42SE2-210ENST00000506929 IGFLR1Q9H665 355 aa6.57□□□□□ -1.36
CDC42SE2-210ENST00000506929 TUT1Q9H6E5 874 aaKnown RBP6.57□□□□□ -1.36
CDC42SE2-210ENST00000506929 FZD6O60353 706 aa6.56□□□□□ -1.36
CDC42SE2-210ENST00000506929 GDF11O95390 407 aa6.56□□□□□ -1.36
CDC42SE2-210ENST00000506929 NPR3P17342 541 aa6.56□□□□□ -1.36
CDC42SE2-210ENST00000506929 DNM1Q05193 864 aaKnown RBP6.56□□□□□ -1.36
CDC42SE2-210ENST00000506929 CCINQ13939 588 aa6.56□□□□□ -1.36
CDC42SE2-210ENST00000506929 NOM1Q5C9Z4 860 aaKnown RBP6.56□□□□□ -1.36
CDC42SE2-210ENST00000506929 AEBP1Q8IUX7 1158 aa6.56□□□□□ -1.36
CDC42SE2-210ENST00000506929 NUDT16Q96DE0 195 aaKnown RBP6.56□□□□□ -1.36
CDC42SE2-210ENST00000506929 IVNS1ABPQ9Y6Y0 642 aa6.56□□□□□ -1.36
CDC42SE2-210ENST00000506929 ZBTB42B2RXF5 422 aa6.55□□□□□ -1.36
CDC42SE2-210ENST00000506929 XYLBO75191 536 aa6.55□□□□□ -1.36
CDC42SE2-210ENST00000506929 AMPD1P23109 780 aa6.55□□□□□ -1.36
CDC42SE2-210ENST00000506929 ARHGAP4P98171 946 aa6.55□□□□□ -1.36
CDC42SE2-210ENST00000506929 TBC1D8BQ0IIM8 1120 aa6.55□□□□□ -1.36
CDC42SE2-210ENST00000506929 MDFIQ99750 246 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms