RNA–Protein interactions for RNA: ENST00000506924.1

CLCN3-205, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 567 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-205ENST00000506924 JUNDP17535 347 aa12.93□□□□□ -0.34
CLCN3-205ENST00000506924 HOXC9P31274 260 aa12.93□□□□□ -0.34
CLCN3-205ENST00000506924 MMP16P51512 607 aa12.93□□□□□ -0.34
CLCN3-205ENST00000506924 TCP11L2Q8N4U5 519 aa12.93□□□□□ -0.34
CLCN3-205ENST00000506924 IP6K1Q92551 441 aa12.93□□□□□ -0.34
CLCN3-205ENST00000506924 NLRP2Q9NX02 1062 aa12.93□□□□□ -0.34
CLCN3-205ENST00000506924 EMILIN1Q9Y6C2 1016 aa12.93□□□□□ -0.34
CLCN3-205ENST00000506924 CRB1P82279 1406 aa12.93□□□□□ -0.34
CLCN3-205ENST00000506924 CC2D1BQ5T0F9 858 aaKnown RBP12.92□□□□□ -0.34
CLCN3-205ENST00000506924 FAM182BQ5T319 152 aa12.92□□□□□ -0.34
CLCN3-205ENST00000506924 MORC1Q86VD1 984 aa12.92□□□□□ -0.34
CLCN3-205ENST00000506924 FAM160A2Q8N612 972 aaPredicted RBP12.92□□□□□ -0.34
CLCN3-205ENST00000506924 PER1O15534 1290 aaPredicted RBP12.91□□□□□ -0.34
CLCN3-205ENST00000506924 TLL1O43897 1013 aa12.91□□□□□ -0.34
CLCN3-205ENST00000506924 DXOO77932 396 aaKnown RBP12.91□□□□□ -0.34
CLCN3-205ENST00000506924 HSP90AB2PQ58FF8 381 aa12.91□□□□□ -0.34
CLCN3-205ENST00000506924 PEAK1Q9H792 1746 aa12.91□□□□□ -0.34
CLCN3-205ENST00000506924 ANKRD26Q9UPS8 1709 aa12.91□□□□□ -0.34
CLCN3-205ENST00000506924 APBB1O00213 710 aa12.9□□□□□ -0.34
CLCN3-205ENST00000506924 AP1G2O75843 785 aa12.9□□□□□ -0.34
CLCN3-205ENST00000506924 KRT27Q7Z3Y8 459 aa12.9□□□□□ -0.34
CLCN3-205ENST00000506924 SLC6A16Q9GZN6 736 aa12.9□□□□□ -0.34
CLCN3-205ENST00000506924 MAP2P11137 1827 aaKnown RBP12.9□□□□□ -0.34
CLCN3-205ENST00000506924 ABCC6O95255 1503 aa12.89□□□□□ -0.35
CLCN3-205ENST00000506924 PTPRNQ16849 979 aa12.89□□□□□ -0.35
CLCN3-205ENST00000506924 LYPD8Q6UX82 237 aa12.89□□□□□ -0.35
CLCN3-205ENST00000506924 CARD10Q9BWT7 1032 aa12.89□□□□□ -0.35
CLCN3-205ENST00000506924 POLKQ9UBT6 870 aa12.89□□□□□ -0.35
CLCN3-205ENST00000506924 BLMP54132 1417 aaPredicted RBP12.88□□□□□ -0.35
CLCN3-205ENST00000506924 USP17L8P0C7I0 530 aa12.88□□□□□ -0.35
CLCN3-205ENST00000506924 USHBP1Q8N6Y0 703 aa12.88□□□□□ -0.35
CLCN3-205ENST00000506924 THRAP3Q9Y2W1 955 aaKnown RBP12.88□□□□□ -0.35
CLCN3-205ENST00000506924 THSD7AQ9UPZ6 1657 aa12.88□□□□□ -0.35
CLCN3-205ENST00000506924 RGPD2P0DJD1 1756 aa12.88□□□□□ -0.35
CLCN3-205ENST00000506924 RTL1A6NKG5 1358 aa12.87□□□□□ -0.35
CLCN3-205ENST00000506924 NSD2O96028 1365 aa12.87□□□□□ -0.35
CLCN3-205ENST00000506924 FLT4P35916 1363 aa12.87□□□□□ -0.35
CLCN3-205ENST00000506924 GGCXP38435 758 aa12.87□□□□□ -0.35
CLCN3-205ENST00000506924 MCM6Q14566 821 aa12.87□□□□□ -0.35
CLCN3-205ENST00000506924 DDX10Q13206 875 aaKnown RBP12.86□□□□□ -0.35
CLCN3-205ENST00000506924 PDE3BQ13370 1112 aa12.86□□□□□ -0.35
CLCN3-205ENST00000506924 INSRP06213 1382 aa12.85□□□□□ -0.35
CLCN3-205ENST00000506924 CTDSPL2Q05D32 466 aa12.85□□□□□ -0.35
CLCN3-205ENST00000506924 NBPF6Q5VWK0 638 aa12.85□□□□□ -0.35
CLCN3-205ENST00000506924 NKX2-3Q8TAU0 364 aa12.85□□□□□ -0.35
CLCN3-205ENST00000506924 NBPF4Q96M43 638 aa12.85□□□□□ -0.35
CLCN3-205ENST00000506924 WNK3Q9BYP7 1800 aa12.84□□□□□ -0.35
CLCN3-205ENST00000506924 DDB1Q16531 1140 aa12.84□□□□□ -0.35
CLCN3-205ENST00000506924 TSC1Q92574 1164 aa12.84□□□□□ -0.35
CLCN3-205ENST00000506924 SMG6Q86US8 1419 aaKnown RBP12.83□□□□□ -0.36
CLCN3-205ENST00000506924 IL2RBP14784 551 aa12.83□□□□□ -0.36
CLCN3-205ENST00000506924 LRRC37A3O60309 1634 aa12.83□□□□□ -0.36
CLCN3-205ENST00000506924 PARP4Q9UKK3 1724 aaKnown RBP12.82□□□□□ -0.36
CLCN3-205ENST00000506924 DISP2A7MBM2 1401 aa12.82□□□□□ -0.36
CLCN3-205ENST00000506924 EXOC5O00471 708 aa12.82□□□□□ -0.36
CLCN3-205ENST00000506924 EIF4A2Q14240 407 aaKnown RBP12.82□□□□□ -0.36
CLCN3-205ENST00000506924 PRDM9Q9NQV7 894 aa12.82□□□□□ -0.36
CLCN3-205ENST00000506924 KIF24Q5T7B8 1368 aa12.81□□□□□ -0.36
CLCN3-205ENST00000506924 EP400Q96L91 3159 aa12.81□□□□□ -0.36
CLCN3-205ENST00000506924 FAM208AQ9UK61 1670 aaKnown RBP12.81□□□□□ -0.36
CLCN3-205ENST00000506924 S1PR4O95977 384 aa12.81□□□□□ -0.36
CLCN3-205ENST00000506924 CCNYL3P0C7X3 344 aa12.81□□□□□ -0.36
CLCN3-205ENST00000506924 MTHFSP49914 203 aa12.81□□□□□ -0.36
CLCN3-205ENST00000506924 MARCH10Q8NA82 808 aaPredicted RBP12.81□□□□□ -0.36
CLCN3-205ENST00000506924 NUDT12Q9BQG2 462 aa12.81□□□□□ -0.36
CLCN3-205ENST00000506924 CDCA7Q9BWT1 371 aaPredicted RBP12.81□□□□□ -0.36
CLCN3-205ENST00000506924 MTMR14Q8NCE2 650 aa12.8□□□□□ -0.36
CLCN3-205ENST00000506924 EVA1BQ9NVM1 165 aa12.8□□□□□ -0.36
CLCN3-205ENST00000506924 TRIM37O94972 964 aa12.79□□□□□ -0.36
CLCN3-205ENST00000506924 F12P00748 615 aaPredicted RBP12.79□□□□□ -0.36
CLCN3-205ENST00000506924 FAM196AQ6ZSG2 479 aa12.79□□□□□ -0.36
CLCN3-205ENST00000506924 ANKLE1Q8NAG6 615 aa12.79□□□□□ -0.36
CLCN3-205ENST00000506924 DDX54Q8TDD1 881 aaKnown RBP12.79□□□□□ -0.36
CLCN3-205ENST00000506924 PRM3Q9NNZ6 103 aa12.79□□□□□ -0.36
CLCN3-205ENST00000506924 SNRKQ9NRH2 765 aa12.79□□□□□ -0.36
CLCN3-205ENST00000506924 PLA2G2EQ9NZK7 142 aa12.79□□□□□ -0.36
CLCN3-205ENST00000506924 NPC1L1Q9UHC9 1359 aa12.79□□□□□ -0.36
CLCN3-205ENST00000506924 MEGF6O75095 1541 aa12.78□□□□□ -0.36
CLCN3-205ENST00000506924 DEFB132Q7Z7B7 95 aa12.78□□□□□ -0.36
CLCN3-205ENST00000506924 RAPGEF4Q8WZA2 1011 aa12.78□□□□□ -0.36
CLCN3-205ENST00000506924 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.78□□□□□ -0.36
CLCN3-205ENST00000506924 TATP17735 454 aaPredicted RBP12.77□□□□□ -0.37
CLCN3-205ENST00000506924 SF3B2Q13435 895 aaKnown RBP12.77□□□□□ -0.37
CLCN3-205ENST00000506924 PTF1AQ7RTS3 328 aa12.77□□□□□ -0.37
CLCN3-205ENST00000506924 LRRN4Q8WUT4 740 aa12.77□□□□□ -0.37
CLCN3-205ENST00000506924 TNS2Q63HR2 1409 aa12.77□□□□□ -0.37
CLCN3-205ENST00000506924 PPP2R1AP30153 589 aa12.76□□□□□ -0.37
CLCN3-205ENST00000506924 KCNH2Q12809 1159 aa12.76□□□□□ -0.37
CLCN3-205ENST00000506924 PNMA1Q8ND90 353 aa12.76□□□□□ -0.37
CLCN3-205ENST00000506924 ZCRB1Q8TBF4 217 aaKnown RBP12.76□□□□□ -0.37
CLCN3-205ENST00000506924 ACSBG1Q96GR2 724 aa12.76□□□□□ -0.37
CLCN3-205ENST00000506924 OVOS2A0A0G2JMS6 1433 aa12.75□□□□□ -0.37
CLCN3-205ENST00000506924 RNF223E7ERA6 249 aa12.75□□□□□ -0.37
CLCN3-205ENST00000506924 IL13P35225 146 aa12.75□□□□□ -0.37
CLCN3-205ENST00000506924 PPP1R18Q6NYC8 613 aa12.75□□□□□ -0.37
CLCN3-205ENST00000506924 AEBP1Q8IUX7 1158 aa12.75□□□□□ -0.37
CLCN3-205ENST00000506924 CCDC125Q86Z20 511 aa12.74□□□□□ -0.37
CLCN3-205ENST00000506924 HMX1Q9NP08 348 aaPredicted RBP12.74□□□□□ -0.37
CLCN3-205ENST00000506924 FCF1Q9Y324 198 aaKnown RBP12.74□□□□□ -0.37
CLCN3-205ENST00000506924 IGSF1Q8N6C5 1336 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms