RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 PANK1Q8TE04 598 aa11.24□□□□□ -0.61
SCAMP1-202ENST00000506858 SUPT16HQ9Y5B9 1047 aaKnown RBP11.24□□□□□ -0.61
SCAMP1-202ENST00000506858 TRIM27P14373 513 aa11.24□□□□□ -0.61
SCAMP1-202ENST00000506858 CLCN6P51797 869 aa11.24□□□□□ -0.61
SCAMP1-202ENST00000506858 EVX2Q03828 476 aa11.24□□□□□ -0.61
SCAMP1-202ENST00000506858 NUTM1Q86Y26 1132 aa11.24□□□□□ -0.61
SCAMP1-202ENST00000506858 ZNF34Q8IZ26 560 aa11.24□□□□□ -0.61
SCAMP1-202ENST00000506858 NLGN1Q8N2Q7 840 aa11.24□□□□□ -0.61
SCAMP1-202ENST00000506858 SETDB2Q96T68 719 aa11.24□□□□□ -0.61
SCAMP1-202ENST00000506858 METTL22Q9BUU2 404 aaPredicted RBP11.24□□□□□ -0.61
SCAMP1-202ENST00000506858 PCDH10Q9P2E7 1040 aa11.24□□□□□ -0.61
SCAMP1-202ENST00000506858 PTGER2P43116 358 aa11.23□□□□□ -0.61
SCAMP1-202ENST00000506858 BRPF1P55201 1214 aaPredicted RBP11.23□□□□□ -0.61
SCAMP1-202ENST00000506858 ATF7IPQ6VMQ6 1270 aa11.23□□□□□ -0.61
SCAMP1-202ENST00000506858 NLRP10Q86W26 655 aa11.23□□□□□ -0.61
SCAMP1-202ENST00000506858 ISCA1Q9BUE6 129 aa11.23□□□□□ -0.61
SCAMP1-202ENST00000506858 MTFR1LQ9H019 292 aa11.23□□□□□ -0.61
SCAMP1-202ENST00000506858 CREBZFQ9NS37 354 aa11.23□□□□□ -0.61
SCAMP1-202ENST00000506858 CASZ1Q86V15 1759 aa11.22□□□□□ -0.61
SCAMP1-202ENST00000506858 POLRMTO00411 1230 aaKnown RBP11.22□□□□□ -0.61
SCAMP1-202ENST00000506858 SERPINB2P05120 415 aa11.22□□□□□ -0.61
SCAMP1-202ENST00000506858 BEND3Q5T5X7 828 aa11.22□□□□□ -0.61
SCAMP1-202ENST00000506858 ZKSCAN2Q63HK3 967 aa11.22□□□□□ -0.61
SCAMP1-202ENST00000506858 CLEC4GQ6UXB4 293 aa11.22□□□□□ -0.61
SCAMP1-202ENST00000506858 KLHL34Q8N239 644 aa11.22□□□□□ -0.61
SCAMP1-202ENST00000506858 SLC16A10Q8TF71 515 aa11.22□□□□□ -0.61
SCAMP1-202ENST00000506858 ZNF652Q9Y2D9 606 aa11.22□□□□□ -0.61
SCAMP1-202ENST00000506858 NEURL1BA8MQ27 555 aa11.21□□□□□ -0.61
SCAMP1-202ENST00000506858 IRX6P78412 446 aaPredicted RBP11.21□□□□□ -0.61
SCAMP1-202ENST00000506858 TMEM57Q8N5G2 664 aa11.21□□□□□ -0.61
SCAMP1-202ENST00000506858 FAM89AQ96GI7 184 aa11.21□□□□□ -0.61
SCAMP1-202ENST00000506858 SGIP1Q9BQI5 828 aa11.21□□□□□ -0.61
SCAMP1-202ENST00000506858 PPP1R1BQ9UD71 204 aaPredicted RBP11.21□□□□□ -0.61
SCAMP1-202ENST00000506858 PTPRCP08575 1304 aa11.21□□□□□ -0.61
SCAMP1-202ENST00000506858 NUP98P52948 1817 aa11.21□□□□□ -0.61
SCAMP1-202ENST00000506858 IPO8O15397 1037 aaKnown RBP11.2□□□□□ -0.62
SCAMP1-202ENST00000506858 HCLS1P14317 486 aaPredicted RBP11.2□□□□□ -0.62
SCAMP1-202ENST00000506858 CD44P16070 742 aaKnown RBP11.2□□□□□ -0.62
SCAMP1-202ENST00000506858 GOLGB1Q14789 3259 aaKnown RBP11.2□□□□□ -0.62
SCAMP1-202ENST00000506858 ERFEQ4G0M1 354 aa11.2□□□□□ -0.62
SCAMP1-202ENST00000506858 NBPF5PQ86XG9 351 aaPredicted RBP11.2□□□□□ -0.62
SCAMP1-202ENST00000506858 KIF16BQ96L93 1317 aa11.2□□□□□ -0.62
SCAMP1-202ENST00000506858 API5Q9BZZ5 524 aaKnown RBP11.2□□□□□ -0.62
SCAMP1-202ENST00000506858 SPON1Q9HCB6 807 aa11.2□□□□□ -0.62
SCAMP1-202ENST00000506858 FBXO3Q9UK99 471 aa11.2□□□□□ -0.62
SCAMP1-202ENST00000506858 WWC3Q9ULE0 1092 aa11.2□□□□□ -0.62
SCAMP1-202ENST00000506858 PARP3Q9Y6F1 533 aa11.2□□□□□ -0.62
SCAMP1-202ENST00000506858 QSER1Q2KHR3 1735 aa11.2□□□□□ -0.62
SCAMP1-202ENST00000506858 CARMIL3Q8ND23 1372 aa11.2□□□□□ -0.62
SCAMP1-202ENST00000506858 RRP1P56182 461 aaKnown RBP11.2□□□□□ -0.62
SCAMP1-202ENST00000506858 NEXNQ0ZGT2 675 aa11.2□□□□□ -0.62
SCAMP1-202ENST00000506858 HSP90AB3PQ58FF7 597 aa11.2□□□□□ -0.62
SCAMP1-202ENST00000506858 PRR5LQ6MZQ0 368 aa11.2□□□□□ -0.62
SCAMP1-202ENST00000506858 C3orf67Q6ZVT6 689 aa11.2□□□□□ -0.62
SCAMP1-202ENST00000506858 DZIP1LQ8IYY4 767 aaKnown RBP11.2□□□□□ -0.62
SCAMP1-202ENST00000506858 TRMT112Q9UI30 125 aaKnown RBP11.2□□□□□ -0.62
SCAMP1-202ENST00000506858 CACNA1FO60840 1977 aa11.19□□□□□ -0.62
SCAMP1-202ENST00000506858 NPHP1O15259 732 aa11.19□□□□□ -0.62
SCAMP1-202ENST00000506858 NTSR2O95665 410 aa11.19□□□□□ -0.62
SCAMP1-202ENST00000506858 POLD1P28340 1107 aa11.19□□□□□ -0.62
SCAMP1-202ENST00000506858 GCKRQ14397 625 aa11.19□□□□□ -0.62
SCAMP1-202ENST00000506858 LINS1Q8NG48 757 aa11.19□□□□□ -0.62
SCAMP1-202ENST00000506858 ARHGAP45Q92619 1136 aa11.19□□□□□ -0.62
SCAMP1-202ENST00000506858 UTP14AQ9BVJ6 771 aaKnown RBP11.19□□□□□ -0.62
SCAMP1-202ENST00000506858 SRCIN1Q9C0H9 1055 aa11.19□□□□□ -0.62
SCAMP1-202ENST00000506858 CWC25Q9NXE8 425 aaPredicted RBP11.19□□□□□ -0.62
SCAMP1-202ENST00000506858 COG6Q9Y2V7 657 aa11.19□□□□□ -0.62
SCAMP1-202ENST00000506858 BCORQ6W2J9 1755 aa11.19□□□□□ -0.62
SCAMP1-202ENST00000506858 ARFGEF2Q9Y6D5 1785 aa11.19□□□□□ -0.62
SCAMP1-202ENST00000506858 SCN7AQ01118 1682 aa11.19□□□□□ -0.62
SCAMP1-202ENST00000506858 ATP10DQ9P241 1426 aa11.18□□□□□ -0.62
SCAMP1-202ENST00000506858 ABCC4O15439 1325 aa11.18□□□□□ -0.62
SCAMP1-202ENST00000506858 POTEMA6NI47 508 aa11.18□□□□□ -0.62
SCAMP1-202ENST00000506858 GTF2E1P29083 439 aaPredicted RBP11.18□□□□□ -0.62
SCAMP1-202ENST00000506858 UBE3BQ7Z3V4 1068 aa11.18□□□□□ -0.62
SCAMP1-202ENST00000506858 FTSJ3Q8IY81 847 aaKnown RBP11.18□□□□□ -0.62
SCAMP1-202ENST00000506858 CCDC85AQ96PX6 553 aaPredicted RBP11.18□□□□□ -0.62
SCAMP1-202ENST00000506858 ZBTB47Q9UFB7 747 aaPredicted RBP11.18□□□□□ -0.62
SCAMP1-202ENST00000506858 ABCC12Q96J65 1359 aa11.18□□□□□ -0.62
SCAMP1-202ENST00000506858 NBPF7P0C2Y1 421 aaPredicted RBP11.17□□□□□ -0.62
SCAMP1-202ENST00000506858 TRIM28Q13263 835 aaKnown RBP11.17□□□□□ -0.62
SCAMP1-202ENST00000506858 ITPRIPQ8IWB1 547 aa11.17□□□□□ -0.62
SCAMP1-202ENST00000506858 CNBD1Q8NA66 436 aa11.17□□□□□ -0.62
SCAMP1-202ENST00000506858 CCDC191Q8NCU4 936 aa11.17□□□□□ -0.62
SCAMP1-202ENST00000506858 MEIS3Q99687 375 aa11.17□□□□□ -0.62
SCAMP1-202ENST00000506858 CHRNA5P30532 468 aa11.17□□□□□ -0.62
SCAMP1-202ENST00000506858 PARP10Q53GL7 1025 aa11.17□□□□□ -0.62
SCAMP1-202ENST00000506858 EPHA10Q5JZY3 1008 aa11.17□□□□□ -0.62
SCAMP1-202ENST00000506858 INTS3Q68E01 1043 aaKnown RBP11.17□□□□□ -0.62
SCAMP1-202ENST00000506858 TPTE2Q6XPS3 522 aa11.17□□□□□ -0.62
SCAMP1-202ENST00000506858 PPP1R42Q7Z4L9 355 aa11.17□□□□□ -0.62
SCAMP1-202ENST00000506858 USP44Q9H0E7 712 aa11.17□□□□□ -0.62
SCAMP1-202ENST00000506858 C9orf78Q9NZ63 289 aaPredicted RBP11.17□□□□□ -0.62
SCAMP1-202ENST00000506858 H7C1W4 665 aa11.16□□□□□ -0.62
SCAMP1-202ENST00000506858 IRS4O14654 1257 aaPredicted RBP11.16□□□□□ -0.62
SCAMP1-202ENST00000506858 CCT4P50991 539 aaKnown RBP11.16□□□□□ -0.62
SCAMP1-202ENST00000506858 CASP7P55210 303 aa11.16□□□□□ -0.62
SCAMP1-202ENST00000506858 SLC51AQ86UW1 340 aa11.16□□□□□ -0.62
SCAMP1-202ENST00000506858 NLGN2Q8NFZ4 835 aa11.16□□□□□ -0.62
SCAMP1-202ENST00000506858 C1orf115Q9H7X2 142 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms