RNA–Protein interactions for RNA: ENST00000506783.5

PHF3-208, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 3,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-208ENST00000506783 INO80Q9ULG1 1556 aaPredicted RBP11.37□□□□□ -0.59
PHF3-208ENST00000506783 RRP9O43818 475 aaKnown RBP11.37□□□□□ -0.59
PHF3-208ENST00000506783 APOBRQ0VD83 1088 aa11.37□□□□□ -0.59
PHF3-208ENST00000506783 NOLC1Q14978 699 aaKnown RBP eCLIP11.37□□□□□ -0.59
PHF3-208ENST00000506783 SKIDA1Q1XH10 827 aa11.37□□□□□ -0.59
PHF3-208ENST00000506783 CREB3L3Q68CJ9 461 aa11.37□□□□□ -0.59
PHF3-208ENST00000506783 LMBR1LQ6UX01 489 aa11.37□□□□□ -0.59
PHF3-208ENST00000506783 HELBQ8NG08 1087 aaPredicted RBP11.37□□□□□ -0.59
PHF3-208ENST00000506783 SLAIN2Q9P270 581 aa11.37□□□□□ -0.59
PHF3-208ENST00000506783 MYOM2P54296 1465 aa11.37□□□□□ -0.59
PHF3-208ENST00000506783 MCM2P49736 904 aa11.37□□□□□ -0.59
PHF3-208ENST00000506783 CCDC183Q5T5S1 534 aa11.37□□□□□ -0.59
PHF3-208ENST00000506783 MROH2AA6NES4 1674 aa11.37□□□□□ -0.59
PHF3-208ENST00000506783 TET3O43151 1660 aa11.37□□□□□ -0.59
PHF3-208ENST00000506783 A0A0G2JLW4 131 aa11.37□□□□□ -0.59
PHF3-208ENST00000506783 CPLX1O14810 134 aa11.37□□□□□ -0.59
PHF3-208ENST00000506783 OFD1O75665 1012 aa11.37□□□□□ -0.59
PHF3-208ENST00000506783 TMEM94Q12767 1356 aa11.37□□□□□ -0.59
PHF3-208ENST00000506783 IQGAP1P46940 1657 aa11.36□□□□□ -0.59
PHF3-208ENST00000506783 SMC2O95347 1197 aa11.36□□□□□ -0.59
PHF3-208ENST00000506783 DDIT3P35638 169 aa11.36□□□□□ -0.59
PHF3-208ENST00000506783 PIK3R4Q99570 1358 aa11.36□□□□□ -0.59
PHF3-208ENST00000506783 RNF20Q5VTR2 975 aa11.36□□□□□ -0.59
PHF3-208ENST00000506783 Q6ZUG5 572 aa11.36□□□□□ -0.59
PHF3-208ENST00000506783 EDC4Q6P2E9 1401 aaKnown RBP11.36□□□□□ -0.59
PHF3-208ENST00000506783 CPS1P31327 1500 aa11.36□□□□□ -0.59
PHF3-208ENST00000506783 GRM8O00222 908 aa11.36□□□□□ -0.59
PHF3-208ENST00000506783 CCDC192P0DO97 292 aa11.36□□□□□ -0.59
PHF3-208ENST00000506783 EIF4A1P60842 406 aaKnown RBP11.36□□□□□ -0.59
PHF3-208ENST00000506783 ARID5BQ14865 1188 aa11.36□□□□□ -0.59
PHF3-208ENST00000506783 CABP4P57796 275 aa11.35□□□□□ -0.59
PHF3-208ENST00000506783 ZNF445P59923 1031 aa11.35□□□□□ -0.59
PHF3-208ENST00000506783 EPHA10Q5JZY3 1008 aa11.35□□□□□ -0.59
PHF3-208ENST00000506783 PYCARDQ9ULZ3 195 aa11.35□□□□□ -0.59
PHF3-208ENST00000506783 AXIN2Q9Y2T1 843 aa11.35□□□□□ -0.59
PHF3-208ENST00000506783 PPP4R3BQ5MIZ7 849 aa11.35□□□□□ -0.59
PHF3-208ENST00000506783 MYOM1P52179 1685 aa11.35□□□□□ -0.59
PHF3-208ENST00000506783 A1BGP04217 495 aa11.35□□□□□ -0.59
PHF3-208ENST00000506783 MARCKSP29966 332 aaPredicted RBP11.35□□□□□ -0.59
PHF3-208ENST00000506783 MAP3K11Q16584 847 aa11.35□□□□□ -0.59
PHF3-208ENST00000506783 ARHGAP31Q2M1Z3 1444 aa11.35□□□□□ -0.59
PHF3-208ENST00000506783 HSP90AB4PQ58FF6 505 aa11.35□□□□□ -0.59
PHF3-208ENST00000506783 TTC6Q86TZ1 520 aa11.35□□□□□ -0.59
PHF3-208ENST00000506783 ZNF496Q96IT1 587 aaPredicted RBP11.35□□□□□ -0.59
PHF3-208ENST00000506783 NGLY1Q96IV0 654 aa11.35□□□□□ -0.59
PHF3-208ENST00000506783 NOL7Q9UMY1 257 aaKnown RBP11.35□□□□□ -0.59
PHF3-208ENST00000506783 CLTCQ00610 1675 aaKnown RBP11.34□□□□□ -0.59
PHF3-208ENST00000506783 FLT4P35916 1363 aa11.34□□□□□ -0.59
PHF3-208ENST00000506783 SNAP23O00161 211 aa11.34□□□□□ -0.59
PHF3-208ENST00000506783 IDH1O75874 414 aaKnown RBP11.34□□□□□ -0.59
PHF3-208ENST00000506783 TPM2P07951 284 aa11.34□□□□□ -0.59
PHF3-208ENST00000506783 HSPA4P34932 840 aa11.34□□□□□ -0.59
PHF3-208ENST00000506783 ZNF165P49910 485 aa11.34□□□□□ -0.59
PHF3-208ENST00000506783 VPS53Q5VIR6 699 aa11.34□□□□□ -0.59
PHF3-208ENST00000506783 PI16Q6UXB8 463 aa11.34□□□□□ -0.59
PHF3-208ENST00000506783 KCNH5Q8NCM2 988 aa11.34□□□□□ -0.59
PHF3-208ENST00000506783 PUS7Q96PZ0 661 aaKnown RBP11.34□□□□□ -0.59
PHF3-208ENST00000506783 FRMPD1Q5SYB0 1578 aa11.34□□□□□ -0.59
PHF3-208ENST00000506783 KDM4FA0A1W2PPD8 638 aa11.34□□□□□ -0.59
PHF3-208ENST00000506783 TATP17735 454 aaPredicted RBP11.34□□□□□ -0.59
PHF3-208ENST00000506783 UBE2HP62256 183 aa11.34□□□□□ -0.59
PHF3-208ENST00000506783 SPECC1Q5M775 1068 aa11.34□□□□□ -0.59
PHF3-208ENST00000506783 HOMER1Q86YM7 354 aa11.34□□□□□ -0.59
PHF3-208ENST00000506783 PNPLA6Q8IY17 1366 aa11.33□□□□□ -0.6
PHF3-208ENST00000506783 PES1O00541 588 aaKnown RBP11.33□□□□□ -0.6
PHF3-208ENST00000506783 NR1I2O75469 434 aa11.33□□□□□ -0.6
PHF3-208ENST00000506783 BRPF1P55201 1214 aaPredicted RBP11.33□□□□□ -0.6
PHF3-208ENST00000506783 BEND3Q5T5X7 828 aa11.33□□□□□ -0.6
PHF3-208ENST00000506783 ANKRD13DQ6ZTN6 518 aa11.33□□□□□ -0.6
PHF3-208ENST00000506783 ZFP91Q96JP5 570 aaPredicted RBP11.33□□□□□ -0.6
PHF3-208ENST00000506783 CAMSAP1Q5T5Y3 1602 aa11.33□□□□□ -0.6
PHF3-208ENST00000506783 NFXL1Q6ZNB6 911 aa11.33□□□□□ -0.6
PHF3-208ENST00000506783 PDILTQ8N807 584 aa11.33□□□□□ -0.6
PHF3-208ENST00000506783 PI4K2BQ8TCG2 481 aa11.33□□□□□ -0.6
PHF3-208ENST00000506783 LMTK3Q96Q04 1460 aa11.33□□□□□ -0.6
PHF3-208ENST00000506783 A0A1B0GVL5 298 aa11.33□□□□□ -0.6
PHF3-208ENST00000506783 LSG1Q9H089 658 aaKnown RBP11.33□□□□□ -0.6
PHF3-208ENST00000506783 ADGRB1O14514 1584 aa11.32□□□□□ -0.6
PHF3-208ENST00000506783 CD163L1Q9NR16 1453 aa11.32□□□□□ -0.6
PHF3-208ENST00000506783 SYNE4Q8N205 404 aa11.32□□□□□ -0.6
PHF3-208ENST00000506783 ISY1Q9ULR0 285 aaKnown RBP11.32□□□□□ -0.6
PHF3-208ENST00000506783 NPHP3Q7Z494 1330 aa11.32□□□□□ -0.6
PHF3-208ENST00000506783 ERICH4A6NGS2 130 aa11.32□□□□□ -0.6
PHF3-208ENST00000506783 SLC27A2O14975 620 aa11.32□□□□□ -0.6
PHF3-208ENST00000506783 U2AF2P26368 475 aaKnown RBP eCLIP11.32□□□□□ -0.62e-6■■□□□ 12.8
PHF3-208ENST00000506783 KSR2Q6VAB6 950 aa11.32□□□□□ -0.6
PHF3-208ENST00000506783 CCDC73Q6ZRK6 1079 aa11.32□□□□□ -0.6
PHF3-208ENST00000506783 SSH3Q8TE77 659 aa11.32□□□□□ -0.6
PHF3-208ENST00000506783 MYL10Q9BUA6 226 aa11.32□□□□□ -0.6
PHF3-208ENST00000506783 PLEKHG1Q9ULL1 1385 aa11.32□□□□□ -0.6
PHF3-208ENST00000506783 RAD50Q92878 1312 aa11.32□□□□□ -0.6
PHF3-208ENST00000506783 ZFYVE9O95405 1425 aa11.32□□□□□ -0.6
PHF3-208ENST00000506783 SASH1O94885 1247 aa11.32□□□□□ -0.6
PHF3-208ENST00000506783 PSMA5P28066 241 aa11.32□□□□□ -0.6
PHF3-208ENST00000506783 FAM89AQ96GI7 184 aa11.32□□□□□ -0.6
PHF3-208ENST00000506783 PPP1R9BQ96SB3 815 aa11.32□□□□□ -0.6
PHF3-208ENST00000506783 HYPKQ9NX55 129 aa11.32□□□□□ -0.6
PHF3-208ENST00000506783 MTMR6Q9Y217 621 aa11.32□□□□□ -0.6
PHF3-208ENST00000506783 MAP3K5Q99683 1374 aa11.31□□□□□ -0.6
PHF3-208ENST00000506783 CCDC171Q6TFL3 1326 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms