RNA–Protein interactions for RNA: ENST00000506573.1

DDR1-258, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-258ENST00000506573 MBIPQ9NS73 344 aa20.14■□□□□ 0.81
DDR1-258ENST00000506573 NTSR2O95665 410 aa20.13■□□□□ 0.81
DDR1-258ENST00000506573 CHPF2Q9P2E5 772 aa20.13■□□□□ 0.81
DDR1-258ENST00000506573 SBF1O95248 1867 aa20.13■□□□□ 0.81
DDR1-258ENST00000506573 NUP98P52948 1817 aa20.13■□□□□ 0.81
DDR1-258ENST00000506573 FKBP4Q02790 459 aaKnown RBP eCLIP20.12■□□□□ 0.81
DDR1-258ENST00000506573 FSTL1Q12841 308 aa20.12■□□□□ 0.81
DDR1-258ENST00000506573 KRT24Q2M2I5 525 aa20.12■□□□□ 0.81
DDR1-258ENST00000506573 MRS2Q9HD23 443 aa20.12■□□□□ 0.81
DDR1-258ENST00000506573 ABCC12Q96J65 1359 aa20.11■□□□□ 0.81
DDR1-258ENST00000506573 ZNF853P0CG23 659 aa20.11■□□□□ 0.81
DDR1-258ENST00000506573 HOXA10P31260 410 aaPredicted RBP20.11■□□□□ 0.81
DDR1-258ENST00000506573 APLP1P51693 650 aa20.11■□□□□ 0.81
DDR1-258ENST00000506573 TCIRG1Q13488 830 aa20.11■□□□□ 0.81
DDR1-258ENST00000506573 ANKRD13DQ6ZTN6 518 aa20.11■□□□□ 0.81
DDR1-258ENST00000506573 PLBD2Q8NHP8 589 aa20.11■□□□□ 0.81
DDR1-258ENST00000506573 C7orf43Q8WVR3 580 aa20.11■□□□□ 0.81
DDR1-258ENST00000506573 CEP350Q5VT06 3117 aa20.11■□□□□ 0.81
DDR1-258ENST00000506573 CRAMP1Q96RY5 1269 aa20.1■□□□□ 0.81
DDR1-258ENST00000506573 TRMT112Q9UI30 125 aaKnown RBP20.1■□□□□ 0.81
DDR1-258ENST00000506573 SLX4Q8IY92 1834 aa20.1■□□□□ 0.81
DDR1-258ENST00000506573 ARFGEF2Q9Y6D5 1785 aa20.1■□□□□ 0.81
DDR1-258ENST00000506573 TNRC6CQ9HCJ0 1690 aaKnown RBP20.1■□□□□ 0.81
DDR1-258ENST00000506573 PRELPP51888 382 aa20.09■□□□□ 0.81
DDR1-258ENST00000506573 GOLGA2Q08379 1002 aa20.09■□□□□ 0.81
DDR1-258ENST00000506573 SLC10A5Q5PT55 438 aa20.09■□□□□ 0.81
DDR1-258ENST00000506573 SMC1BQ8NDV3 1235 aa20.09■□□□□ 0.81
DDR1-258ENST00000506573 CCDC27Q2M243 656 aa20.08■□□□□ 0.81
DDR1-258ENST00000506573 NLRP10Q86W26 655 aa20.08■□□□□ 0.81
DDR1-258ENST00000506573 FER1L6Q2WGJ9 1857 aa20.07■□□□□ 0.8
DDR1-258ENST00000506573 SH3TC1Q8TE82 1336 aa20.07■□□□□ 0.8
DDR1-258ENST00000506573 PPEF1O14829 653 aaPredicted RBP20.07■□□□□ 0.8
DDR1-258ENST00000506573 JDP2Q8WYK2 163 aa20.07■□□□□ 0.8
DDR1-258ENST00000506573 PSMD1Q99460 953 aa20.07■□□□□ 0.8
DDR1-258ENST00000506573 DDX58O95786 925 aaKnown RBP20.06■□□□□ 0.8
DDR1-258ENST00000506573 HSP90B1P14625 803 aaKnown RBP20.06■□□□□ 0.8
DDR1-258ENST00000506573 NCBP3Q53F19 620 aaKnown RBP20.06■□□□□ 0.8
DDR1-258ENST00000506573 CCDC30Q5VVM6 783 aa20.06■□□□□ 0.8
DDR1-258ENST00000506573 RIC3Q7Z5B4 369 aa20.06■□□□□ 0.8
DDR1-258ENST00000506573 TIAM2Q8IVF5 1701 aa20.06■□□□□ 0.8
DDR1-258ENST00000506573 SYNE4Q8N205 404 aa20.06■□□□□ 0.8
DDR1-258ENST00000506573 ZNF277Q9NRM2 450 aaPredicted RBP20.06■□□□□ 0.8
DDR1-258ENST00000506573 CACNA1SQ13698 1873 aa20.05■□□□□ 0.8
DDR1-258ENST00000506573 IQCA1LA6NCM1 817 aa20.05■□□□□ 0.8
DDR1-258ENST00000506573 ELL2O00472 640 aaPredicted RBP20.05■□□□□ 0.8
DDR1-258ENST00000506573 IARSP41252 1262 aaKnown RBP20.05■□□□□ 0.8
DDR1-258ENST00000506573 DDX46Q7L014 1031 aaKnown RBP20.05■□□□□ 0.8
DDR1-258ENST00000506573 BBOX1O75936 387 aa20.03■□□□□ 0.8
DDR1-258ENST00000506573 CCDC184Q52MB2 194 aa20.03■□□□□ 0.8
DDR1-258ENST00000506573 STK31Q9BXU1 1019 aa20.03■□□□□ 0.8
DDR1-258ENST00000506573 HCLS1P14317 486 aaPredicted RBP20.02■□□□□ 0.8
DDR1-258ENST00000506573 TMC4Q7Z404 712 aa20.02■□□□□ 0.8
DDR1-258ENST00000506573 WWC1Q8IX03 1113 aa20.02■□□□□ 0.8
DDR1-258ENST00000506573 SUPT20HQ8NEM7 779 aa20.02■□□□□ 0.8
DDR1-258ENST00000506573 CCDC88AQ3V6T2 1871 aa20.02■□□□□ 0.8
DDR1-258ENST00000506573 IL16Q14005 1332 aa20.02■□□□□ 0.79
DDR1-258ENST00000506573 TCERG1O14776 1098 aaKnown RBP20.01■□□□□ 0.79
DDR1-258ENST00000506573 DDNO94850 711 aaPredicted RBP20.01■□□□□ 0.79
DDR1-258ENST00000506573 TRIM28Q13263 835 aaKnown RBP20.01■□□□□ 0.79
DDR1-258ENST00000506573 OLFM4Q6UX06 510 aa20.01■□□□□ 0.79
DDR1-258ENST00000506573 C8orf58Q8NAV2 365 aa20.01■□□□□ 0.79
DDR1-258ENST00000506573 ISCA1Q9BUE6 129 aa20.01■□□□□ 0.79
DDR1-258ENST00000506573 VPS33BQ9H267 617 aa20.01■□□□□ 0.79
DDR1-258ENST00000506573 ATP6V0A2Q9Y487 856 aa20.01■□□□□ 0.79
DDR1-258ENST00000506573 DICER1Q9UPY3 1922 aaKnown RBP20.01■□□□□ 0.79
DDR1-258ENST00000506573 EIF6P56537 245 aaKnown RBP20■□□□□ 0.79
DDR1-258ENST00000506573 ANKRD36CQ5JPF3 1778 aa20■□□□□ 0.79
DDR1-258ENST00000506573 ABCC4O15439 1325 aa20■□□□□ 0.79
DDR1-258ENST00000506573 ATP5J2-PTCD1G3V325 749 aa19.99■□□□□ 0.79
DDR1-258ENST00000506573 LARGE2Q8N3Y3 721 aa19.99■□□□□ 0.79
DDR1-258ENST00000506573 WDR90Q96KV7 1748 aa19.99■□□□□ 0.79
DDR1-258ENST00000506573 GRAPQ13588 217 aa19.98■□□□□ 0.79
DDR1-258ENST00000506573 C3orf67Q6ZVT6 689 aa19.98■□□□□ 0.79
DDR1-258ENST00000506573 SP8Q8IXZ3 490 aa19.98■□□□□ 0.79
DDR1-258ENST00000506573 GRAPLQ8TC17 118 aaPredicted RBP19.98■□□□□ 0.79
DDR1-258ENST00000506573 FAM89AQ96GI7 184 aa19.98■□□□□ 0.79
DDR1-258ENST00000506573 L3MBTL3Q96JM7 780 aaPredicted RBP19.98■□□□□ 0.79
DDR1-258ENST00000506573 FZD9O00144 591 aa19.97■□□□□ 0.79
DDR1-258ENST00000506573 TWISTNBQ3B726 338 aaPredicted RBP19.97■□□□□ 0.79
DDR1-258ENST00000506573 DPP8Q6V1X1 898 aaPredicted RBP19.97■□□□□ 0.79
DDR1-258ENST00000506573 WDR63Q8IWG1 891 aa19.97■□□□□ 0.79
DDR1-258ENST00000506573 NIM1KQ8IY84 436 aa19.97■□□□□ 0.79
DDR1-258ENST00000506573 GPC2Q8N158 579 aa19.97■□□□□ 0.79
DDR1-258ENST00000506573 TSR2Q969E8 191 aaKnown RBP19.97■□□□□ 0.79
DDR1-258ENST00000506573 PHAXQ9H814 394 aaKnown RBP19.97■□□□□ 0.79
DDR1-258ENST00000506573 NEXNQ0ZGT2 675 aa19.96■□□□□ 0.79
DDR1-258ENST00000506573 ZBTB38Q8NAP3 1195 aaPredicted RBP19.96■□□□□ 0.79
DDR1-258ENST00000506573 CCDC191Q8NCU4 936 aa19.96■□□□□ 0.79
DDR1-258ENST00000506573 MYD88Q99836 296 aa19.96■□□□□ 0.79
DDR1-258ENST00000506573 HACL1Q9UJ83 578 aa19.96■□□□□ 0.79
DDR1-258ENST00000506573 POTECB2RU33 542 aa19.95■□□□□ 0.78
DDR1-258ENST00000506573 IRS4O14654 1257 aaPredicted RBP19.95■□□□□ 0.78
DDR1-258ENST00000506573 PPIP5K2O43314 1243 aa19.95■□□□□ 0.78
DDR1-258ENST00000506573 LMOD1P29536 600 aaPredicted RBP19.95■□□□□ 0.78
DDR1-258ENST00000506573 CHADLQ6NUI6 762 aa19.95■□□□□ 0.78
DDR1-258ENST00000506573 MPNDQ8N594 471 aa19.95■□□□□ 0.78
DDR1-258ENST00000506573 CWC25Q9NXE8 425 aaPredicted RBP19.95■□□□□ 0.78
DDR1-258ENST00000506573 SF3B3Q15393 1217 aaKnown RBP19.94■□□□□ 0.78
DDR1-258ENST00000506573 PNMA8AQ86V59 439 aaPredicted RBP19.94■□□□□ 0.78
DDR1-258ENST00000506573 FAM9BQ8IZU0 186 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms