RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 FAM26DQ5JW98 314 aa5.09□□□□□ -1.59
TRAPPC11-205ENST00000506426 RNFT1Q5M7Z0 435 aa5.09□□□□□ -1.59
TRAPPC11-205ENST00000506426 GPAT2Q6NUI2 795 aa5.09□□□□□ -1.59
TRAPPC11-205ENST00000506426 GJD3Q8N144 294 aa5.09□□□□□ -1.59
TRAPPC11-205ENST00000506426 DUSP9Q99956 384 aaKnown RBP5.09□□□□□ -1.59
TRAPPC11-205ENST00000506426 GRIP2Q9C0E4 1043 aa5.09□□□□□ -1.59
TRAPPC11-205ENST00000506426 PARP2Q9UGN5 583 aa5.09□□□□□ -1.59
TRAPPC11-205ENST00000506426 LOC105371045A0A1W2PR82 267 aa5.08□□□□□ -1.6
TRAPPC11-205ENST00000506426 SCAMP3O14828 347 aaKnown RBP5.08□□□□□ -1.6
TRAPPC11-205ENST00000506426 SORBS3O60504 671 aa5.08□□□□□ -1.6
TRAPPC11-205ENST00000506426 NEFLP07196 543 aa5.08□□□□□ -1.6
TRAPPC11-205ENST00000506426 RNF144AP50876 292 aaPredicted RBP5.08□□□□□ -1.6
TRAPPC11-205ENST00000506426 DAB2P98082 770 aa5.08□□□□□ -1.6
TRAPPC11-205ENST00000506426 PSMD2Q13200 908 aa5.08□□□□□ -1.6
TRAPPC11-205ENST00000506426 NBPF1Q3BBV0 1214 aa5.08□□□□□ -1.6
TRAPPC11-205ENST00000506426 ALG1LQ6GMV1 187 aa5.08□□□□□ -1.6
TRAPPC11-205ENST00000506426 TMC4Q7Z404 712 aa5.08□□□□□ -1.6
TRAPPC11-205ENST00000506426 TREML1Q86YW5 311 aa5.08□□□□□ -1.6
TRAPPC11-205ENST00000506426 C8orf37Q96NL8 207 aa5.08□□□□□ -1.6
TRAPPC11-205ENST00000506426 TSEN34Q9BSV6 310 aaKnown RBP5.08□□□□□ -1.6
TRAPPC11-205ENST00000506426 PNMA6FA0A0J9YX94 578 aa5.07□□□□□ -1.6
TRAPPC11-205ENST00000506426 MICAL2O94851 1124 aa5.07□□□□□ -1.6
TRAPPC11-205ENST00000506426 TATP17735 454 aaPredicted RBP5.07□□□□□ -1.6
TRAPPC11-205ENST00000506426 IRS1P35568 1242 aa5.07□□□□□ -1.6
TRAPPC11-205ENST00000506426 TXLNAP40222 546 aa5.07□□□□□ -1.6
TRAPPC11-205ENST00000506426 PLA2G4AP47712 749 aa5.07□□□□□ -1.6
TRAPPC11-205ENST00000506426 ZC3H6P61129 1189 aaKnown RBP5.07□□□□□ -1.6
TRAPPC11-205ENST00000506426 ENOX2Q16206 610 aaKnown RBP5.07□□□□□ -1.6
TRAPPC11-205ENST00000506426 C4orf17Q53FE4 359 aa5.07□□□□□ -1.6
TRAPPC11-205ENST00000506426 ZNF385CQ66K41 422 aaPredicted RBP5.07□□□□□ -1.6
TRAPPC11-205ENST00000506426 TMEM87AQ8NBN3 555 aa5.07□□□□□ -1.6
TRAPPC11-205ENST00000506426 RHPN1Q8TCX5 695 aa5.07□□□□□ -1.6
TRAPPC11-205ENST00000506426 GPR152Q8TDT2 470 aa5.07□□□□□ -1.6
TRAPPC11-205ENST00000506426 AIDAQ96BJ3 306 aa5.07□□□□□ -1.6
TRAPPC11-205ENST00000506426 COL25A1Q9BXS0 654 aaPredicted RBP5.07□□□□□ -1.6
TRAPPC11-205ENST00000506426 WWC3Q9ULE0 1092 aa5.07□□□□□ -1.6
TRAPPC11-205ENST00000506426 SOS2Q07890 1332 aaPredicted RBP5.06□□□□□ -1.6
TRAPPC11-205ENST00000506426 FIGNL2A6NMB9 653 aa5.06□□□□□ -1.6
TRAPPC11-205ENST00000506426 UPP2O95045 317 aa5.06□□□□□ -1.6
TRAPPC11-205ENST00000506426 ERCC5P28715 1186 aaPredicted RBP5.06□□□□□ -1.6
TRAPPC11-205ENST00000506426 C8orf34Q49A92 452 aa5.06□□□□□ -1.6
TRAPPC11-205ENST00000506426 LINC00528Q8N1L1 170 aa5.06□□□□□ -1.6
TRAPPC11-205ENST00000506426 MEIOBQ8N635 442 aa5.06□□□□□ -1.6
TRAPPC11-205ENST00000506426 PIK3R5Q8WYR1 880 aa5.06□□□□□ -1.6
TRAPPC11-205ENST00000506426 NUDT16Q96DE0 195 aaKnown RBP5.06□□□□□ -1.6
TRAPPC11-205ENST00000506426 FAM161BQ96MY7 647 aa5.06□□□□□ -1.6
TRAPPC11-205ENST00000506426 FRMD6Q96NE9 622 aa5.06□□□□□ -1.6
TRAPPC11-205ENST00000506426 CSRNP1Q96S65 589 aa5.06□□□□□ -1.6
TRAPPC11-205ENST00000506426 ZDHHC3Q9NYG2 299 aa5.06□□□□□ -1.6
TRAPPC11-205ENST00000506426 ANKIB1Q9P2G1 1089 aa5.06□□□□□ -1.6
TRAPPC11-205ENST00000506426 VTI1BQ9UEU0 232 aa5.06□□□□□ -1.6
TRAPPC11-205ENST00000506426 GPC6Q9Y625 555 aaPredicted RBP5.06□□□□□ -1.6
TRAPPC11-205ENST00000506426 ABCC9O60706 1549 aa5.06□□□□□ -1.6
TRAPPC11-205ENST00000506426 TGFBR3LH3BV60 316 aa5.05□□□□□ -1.6
TRAPPC11-205ENST00000506426 SPINT1O43278 529 aa5.05□□□□□ -1.6
TRAPPC11-205ENST00000506426 FBF1Q8TES7 1133 aa5.05□□□□□ -1.6
TRAPPC11-205ENST00000506426 C7orf43Q8WVR3 580 aa5.05□□□□□ -1.6
TRAPPC11-205ENST00000506426 INSM2Q96T92 566 aaPredicted RBP5.05□□□□□ -1.6
TRAPPC11-205ENST00000506426 DNAJC25Q9H1X3 360 aa5.05□□□□□ -1.6
TRAPPC11-205ENST00000506426 NEUROD4Q9HD90 331 aa5.05□□□□□ -1.6
TRAPPC11-205ENST00000506426 POLMQ9NP87 494 aaPredicted RBP5.05□□□□□ -1.6
TRAPPC11-205ENST00000506426 BCS1LQ9Y276 419 aa5.05□□□□□ -1.6
TRAPPC11-205ENST00000506426 SPATA31C2B4DYI2 1134 aa5.04□□□□□ -1.6
TRAPPC11-205ENST00000506426 EIF1AYO14602 144 aaKnown RBP5.04□□□□□ -1.6
TRAPPC11-205ENST00000506426 OPLAHO14841 1288 aa5.04□□□□□ -1.6
TRAPPC11-205ENST00000506426 GNA15P30679 374 aa5.04□□□□□ -1.6
TRAPPC11-205ENST00000506426 HDLBPQ00341 1268 aaKnown RBP5.04□□□□□ -1.6
TRAPPC11-205ENST00000506426 PTSQ03393 145 aa5.04□□□□□ -1.6
TRAPPC11-205ENST00000506426 WDR44Q5JSH3 913 aa5.04□□□□□ -1.6
TRAPPC11-205ENST00000506426 XP32Q5T750 250 aa5.04□□□□□ -1.6
TRAPPC11-205ENST00000506426 IER5Q5VY09 327 aa5.04□□□□□ -1.6
TRAPPC11-205ENST00000506426 BICDL1Q6ZP65 573 aa5.04□□□□□ -1.6
TRAPPC11-205ENST00000506426 SVOPQ8N4V2 548 aa5.04□□□□□ -1.6
TRAPPC11-205ENST00000506426 SUSD3Q96L08 255 aa5.04□□□□□ -1.6
TRAPPC11-205ENST00000506426 DRC1Q96MC2 740 aa5.04□□□□□ -1.6
TRAPPC11-205ENST00000506426 GGNBP2Q9H3C7 697 aa5.04□□□□□ -1.6
TRAPPC11-205ENST00000506426 METTL5Q9NRN9 209 aaKnown RBP5.04□□□□□ -1.6
TRAPPC11-205ENST00000506426 FNDC3AQ9Y2H6 1198 aaKnown RBP5.04□□□□□ -1.6
TRAPPC11-205ENST00000506426 CPNE3O75131 537 aaKnown RBP5.03□□□□□ -1.6
TRAPPC11-205ENST00000506426 PHKA2P46019 1235 aa5.03□□□□□ -1.6
TRAPPC11-205ENST00000506426 POU4F2Q12837 409 aa5.03□□□□□ -1.6
TRAPPC11-205ENST00000506426 ORC1Q13415 861 aa5.03□□□□□ -1.6
TRAPPC11-205ENST00000506426 NAALADL2Q58DX5 795 aa5.03□□□□□ -1.6
TRAPPC11-205ENST00000506426 LDLRAD1Q5T700 205 aa5.03□□□□□ -1.6
TRAPPC11-205ENST00000506426 NBPF10Q6P3W6 841 aaKnown RBP5.03□□□□□ -1.6
TRAPPC11-205ENST00000506426 SREK1Q8WXA9 508 aaKnown RBP5.03□□□□□ -1.6
TRAPPC11-205ENST00000506426 RNF34Q969K3 372 aa5.03□□□□□ -1.6
TRAPPC11-205ENST00000506426 SETDB2Q96T68 719 aa5.03□□□□□ -1.6
TRAPPC11-205ENST00000506426 RNF19AQ9NV58 838 aa5.03□□□□□ -1.6
TRAPPC11-205ENST00000506426 SPG7Q9UQ90 795 aa5.03□□□□□ -1.6
TRAPPC11-205ENST00000506426 AK5Q9Y6K8 562 aa5.03□□□□□ -1.6
TRAPPC11-205ENST00000506426 ARHGEF15O94989 841 aa5.02□□□□□ -1.61
TRAPPC11-205ENST00000506426 ZNF76P36508 570 aa5.02□□□□□ -1.61
TRAPPC11-205ENST00000506426 CTSOP43234 321 aaPredicted RBP5.02□□□□□ -1.61
TRAPPC11-205ENST00000506426 IDH3AP50213 366 aa5.02□□□□□ -1.61
TRAPPC11-205ENST00000506426 ARSDP51689 593 aa5.02□□□□□ -1.61
TRAPPC11-205ENST00000506426 C9orf131Q5VYM1 1079 aa5.02□□□□□ -1.61
TRAPPC11-205ENST00000506426 XKR5Q6UX68 686 aa5.02□□□□□ -1.61
TRAPPC11-205ENST00000506426 PRICKLE2Q7Z3G6 844 aa5.02□□□□□ -1.61
TRAPPC11-205ENST00000506426 VWA5B2Q8N398 1253 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms