RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 MVPQ14764 893 aaKnown RBP7.6□□□□□ -1.19
SCLT1-207ENST00000506233 C9orf131Q5VYM1 1079 aa7.6□□□□□ -1.19
SCLT1-207ENST00000506233 TMEM92Q6UXU6 159 aa7.6□□□□□ -1.19
SCLT1-207ENST00000506233 LRP6O75581 1613 aa7.59□□□□□ -1.19
SCLT1-207ENST00000506233 PIK3CDO00329 1044 aa7.59□□□□□ -1.19
SCLT1-207ENST00000506233 UBE2Q2Q8WVN8 375 aa7.59□□□□□ -1.19
SCLT1-207ENST00000506233 DOT1LQ8TEK3 1739 aa7.59□□□□□ -1.19
SCLT1-207ENST00000506233 CPDO75976 1380 aa7.59□□□□□ -1.19
SCLT1-207ENST00000506233 CTDSPL2Q05D32 466 aa7.59□□□□□ -1.19
SCLT1-207ENST00000506233 G2E3Q7L622 706 aa7.59□□□□□ -1.19
SCLT1-207ENST00000506233 SPTLC1O15269 473 aa7.59□□□□□ -1.19
SCLT1-207ENST00000506233 MAP3K7O43318 606 aa7.59□□□□□ -1.19
SCLT1-207ENST00000506233 SSFA2P28290 1259 aa7.59□□□□□ -1.19
SCLT1-207ENST00000506233 UBXN4Q92575 508 aa7.59□□□□□ -1.19
SCLT1-207ENST00000506233 PHF12Q96QT6 1004 aa7.59□□□□□ -1.19
SCLT1-207ENST00000506233 ADGRG1Q9Y653 693 aa7.59□□□□□ -1.19
SCLT1-207ENST00000506233 TNS2Q63HR2 1409 aa7.59□□□□□ -1.19
SCLT1-207ENST00000506233 TNS3Q68CZ2 1445 aa7.59□□□□□ -1.19
SCLT1-207ENST00000506233 BCORQ6W2J9 1755 aa7.59□□□□□ -1.2
SCLT1-207ENST00000506233 ALDH1L2Q3SY69 923 aa7.58□□□□□ -1.2
SCLT1-207ENST00000506233 SULT6B1Q6IMI4 303 aa7.58□□□□□ -1.2
SCLT1-207ENST00000506233 KCNQ3O43525 872 aa7.58□□□□□ -1.2
SCLT1-207ENST00000506233 HDAC1Q13547 482 aaPredicted RBP7.58□□□□□ -1.2
SCLT1-207ENST00000506233 PADI6Q6TGC4 694 aa7.58□□□□□ -1.2
SCLT1-207ENST00000506233 ANKLE2Q86XL3 938 aa7.58□□□□□ -1.2
SCLT1-207ENST00000506233 SMC5Q8IY18 1101 aa7.58□□□□□ -1.2
SCLT1-207ENST00000506233 ZNF592Q92610 1267 aa7.58□□□□□ -1.2
SCLT1-207ENST00000506233 SBF2Q86WG5 1849 aa7.58□□□□□ -1.2
SCLT1-207ENST00000506233 CT47B1P0C2W7 299 aaPredicted RBP7.58□□□□□ -1.2
SCLT1-207ENST00000506233 DPH6Q7L8W6 267 aa7.58□□□□□ -1.2
SCLT1-207ENST00000506233 COL14A1Q05707 1796 aaKnown RBP7.58□□□□□ -1.2
SCLT1-207ENST00000506233 MARSP56192 900 aaKnown RBP7.57□□□□□ -1.2
SCLT1-207ENST00000506233 IP6K1Q92551 441 aa7.57□□□□□ -1.2
SCLT1-207ENST00000506233 COG3Q96JB2 828 aa7.57□□□□□ -1.2
SCLT1-207ENST00000506233 LGR6Q9HBX8 967 aa7.57□□□□□ -1.2
SCLT1-207ENST00000506233 SOS2Q07890 1332 aaPredicted RBP7.57□□□□□ -1.2
SCLT1-207ENST00000506233 PRAMEF22A3QJZ6 481 aa7.57□□□□□ -1.2
SCLT1-207ENST00000506233 DDIT3P35638 169 aa7.57□□□□□ -1.2
SCLT1-207ENST00000506233 FBXO33Q7Z6M2 555 aa7.57□□□□□ -1.2
SCLT1-207ENST00000506233 LRRN4Q8WUT4 740 aa7.57□□□□□ -1.2
SCLT1-207ENST00000506233 GPATCH3Q96I76 525 aa7.57□□□□□ -1.2
SCLT1-207ENST00000506233 MIS18AQ9NYP9 233 aa7.57□□□□□ -1.2
SCLT1-207ENST00000506233 NWD2Q9ULI1 1742 aa7.57□□□□□ -1.2
SCLT1-207ENST00000506233 ATF7IPQ6VMQ6 1270 aa7.57□□□□□ -1.2
SCLT1-207ENST00000506233 ADCY9O60503 1353 aa7.57□□□□□ -1.2
SCLT1-207ENST00000506233 LAMB2P55268 1798 aa7.56□□□□□ -1.2
SCLT1-207ENST00000506233 NUTM2GQ5VZR2 741 aa7.56□□□□□ -1.2
SCLT1-207ENST00000506233 LRRC59Q96AG4 307 aaKnown RBP7.56□□□□□ -1.2
SCLT1-207ENST00000506233 THSD7AQ9UPZ6 1657 aa7.56□□□□□ -1.2
SCLT1-207ENST00000506233 DNAJC2Q99543 621 aaKnown RBP7.56□□□□□ -1.2
SCLT1-207ENST00000506233 EID1Q9Y6B2 187 aa7.56□□□□□ -1.2
SCLT1-207ENST00000506233 ZNF646O15015 1829 aaPredicted RBP7.56□□□□□ -1.2
SCLT1-207ENST00000506233 IBTKQ9P2D0 1353 aaPredicted RBP7.56□□□□□ -1.2
SCLT1-207ENST00000506233 INTS3Q68E01 1043 aaKnown RBP7.56□□□□□ -1.2
SCLT1-207ENST00000506233 CENPQQ7L2Z9 268 aaPredicted RBP7.56□□□□□ -1.2
SCLT1-207ENST00000506233 USHBP1Q8N6Y0 703 aa7.56□□□□□ -1.2
SCLT1-207ENST00000506233 ARHGAP45Q92619 1136 aa7.56□□□□□ -1.2
SCLT1-207ENST00000506233 AK9Q5TCS8 1911 aa7.56□□□□□ -1.2
SCLT1-207ENST00000506233 ERBB3P21860 1342 aa7.55□□□□□ -1.2
SCLT1-207ENST00000506233 LRP5O75197 1615 aa7.55□□□□□ -1.2
SCLT1-207ENST00000506233 HSPA2P54652 639 aa7.55□□□□□ -1.2
SCLT1-207ENST00000506233 TSNAXIP1Q2TAA8 658 aa7.55□□□□□ -1.2
SCLT1-207ENST00000506233 CRTC2Q53ET0 693 aaPredicted RBP7.55□□□□□ -1.2
SCLT1-207ENST00000506233 LDLRAD1Q5T700 205 aa7.55□□□□□ -1.2
SCLT1-207ENST00000506233 BRINP3Q76B58 766 aa7.55□□□□□ -1.2
SCLT1-207ENST00000506233 ANKRD13AQ8IZ07 590 aa7.55□□□□□ -1.2
SCLT1-207ENST00000506233 MYH14Q7Z406 1995 aaKnown RBP7.55□□□□□ -1.2
SCLT1-207ENST00000506233 ARAP2Q8WZ64 1704 aa7.55□□□□□ -1.2
SCLT1-207ENST00000506233 PLEKHG2Q9H7P9 1386 aa7.55□□□□□ -1.2
SCLT1-207ENST00000506233 LAMA4Q16363 1823 aa7.55□□□□□ -1.2
SCLT1-207ENST00000506233 KAZALD1Q96I82 304 aa7.55□□□□□ -1.2
SCLT1-207ENST00000506233 ZNF335Q9H4Z2 1342 aaPredicted RBP7.55□□□□□ -1.2
SCLT1-207ENST00000506233 U2SURPO15042 1029 aaKnown RBP7.55□□□□□ -1.2
SCLT1-207ENST00000506233 PDCD7Q8N8D1 485 aaKnown RBP7.55□□□□□ -1.2
SCLT1-207ENST00000506233 TAF1LQ8IZX4 1826 aa7.55□□□□□ -1.2
SCLT1-207ENST00000506233 SPATA31A3Q5VYP0 1347 aa7.54□□□□□ -1.2
SCLT1-207ENST00000506233 MYO5AQ9Y4I1 1855 aaKnown RBP7.54□□□□□ -1.2
SCLT1-207ENST00000506233 MARCH6O60337 910 aa7.54□□□□□ -1.2
SCLT1-207ENST00000506233 HLA-CQ95604 372 aa7.54□□□□□ -1.2
SCLT1-207ENST00000506233 MAP3K5Q99683 1374 aa7.54□□□□□ -1.2
SCLT1-207ENST00000506233 GCP02774 474 aa7.54□□□□□ -1.2
SCLT1-207ENST00000506233 HDGFP51858 240 aaKnown RBP7.54□□□□□ -1.2
SCLT1-207ENST00000506233 WASHC4Q2M389 1173 aa7.54□□□□□ -1.2
SCLT1-207ENST00000506233 GSPT1P15170 499 aaKnown RBP7.54□□□□□ -1.2
SCLT1-207ENST00000506233 L3MBTL3Q96JM7 780 aaPredicted RBP7.54□□□□□ -1.2
SCLT1-207ENST00000506233 CCDC136Q96JN2 1154 aa7.54□□□□□ -1.2
SCLT1-207ENST00000506233 ANTXR1Q9H6X2 564 aa7.54□□□□□ -1.2
SCLT1-207ENST00000506233 NOVA2Q9UNW9 492 aaKnown RBP7.54□□□□□ -1.2
SCLT1-207ENST00000506233 LY75O60449 1722 aa7.53□□□□□ -1.2
SCLT1-207ENST00000506233 XPCQ01831 940 aaPredicted RBP7.53□□□□□ -1.2
SCLT1-207ENST00000506233 PCDHGA10Q9Y5H3 936 aa7.53□□□□□ -1.2
SCLT1-207ENST00000506233 FOSBP53539 338 aa7.53□□□□□ -1.2
SCLT1-207ENST00000506233 NUCB1Q02818 461 aa7.53□□□□□ -1.2
SCLT1-207ENST00000506233 NUP98P52948 1817 aa7.53□□□□□ -1.2
SCLT1-207ENST00000506233 CD46P15529 392 aa7.53□□□□□ -1.2
SCLT1-207ENST00000506233 IL25Q9H293 177 aa7.53□□□□□ -1.2
SCLT1-207ENST00000506233 RAB11FIP3O75154 756 aa7.52□□□□□ -1.21
SCLT1-207ENST00000506233 CANXP27824 592 aaKnown RBP7.52□□□□□ -1.21
SCLT1-207ENST00000506233 CACNB1Q02641 598 aaPredicted RBP7.52□□□□□ -1.21
SCLT1-207ENST00000506233 TUSC1Q2TAM9 212 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms