RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 AAMPQ13685 434 aa10.24□□□□□ -0.77
NIPBL-205ENST00000505998 MARK1Q9P0L2 795 aa10.24□□□□□ -0.77
NIPBL-205ENST00000505998 ZBTB7CA1YPR0 619 aa10.23□□□□□ -0.77
NIPBL-205ENST00000505998 SFSWAPQ12872 951 aaKnown RBP10.23□□□□□ -0.77
NIPBL-205ENST00000505998 COL25A1Q9BXS0 654 aaPredicted RBP10.23□□□□□ -0.77
NIPBL-205ENST00000505998 KCNH4Q9UQ05 1017 aa10.23□□□□□ -0.77
NIPBL-205ENST00000505998 OPLAHO14841 1288 aa10.22□□□□□ -0.77
NIPBL-205ENST00000505998 CD33P20138 364 aa10.22□□□□□ -0.77
NIPBL-205ENST00000505998 MX2P20592 715 aa10.22□□□□□ -0.77
NIPBL-205ENST00000505998 GAS6Q14393 721 aa10.22□□□□□ -0.77
NIPBL-205ENST00000505998 TREML4Q6UXN2 200 aa10.22□□□□□ -0.77
NIPBL-205ENST00000505998 ATCAYQ86WG3 371 aa10.22□□□□□ -0.77
NIPBL-205ENST00000505998 RGL4Q8IZJ4 473 aa10.22□□□□□ -0.77
NIPBL-205ENST00000505998 STRN4Q9NRL3 753 aa10.22□□□□□ -0.77
NIPBL-205ENST00000505998 BIN2Q9UBW5 565 aaPredicted RBP10.22□□□□□ -0.77
NIPBL-205ENST00000505998 KCNQ4P56696 695 aa10.21□□□□□ -0.77
NIPBL-205ENST00000505998 PIK3R5Q8WYR1 880 aa10.21□□□□□ -0.77
NIPBL-205ENST00000505998 RTCBQ9Y3I0 505 aaKnown RBP10.21□□□□□ -0.77
NIPBL-205ENST00000505998 CTBSQ01459 385 aa10.2□□□□□ -0.78
NIPBL-205ENST00000505998 CMTR1Q8N1G2 835 aaKnown RBP10.2□□□□□ -0.78
NIPBL-205ENST00000505998 GPR152Q8TDT2 470 aa10.2□□□□□ -0.78
NIPBL-205ENST00000505998 MBIPQ9NS73 344 aa10.2□□□□□ -0.78
NIPBL-205ENST00000505998 HCN2Q9UL51 889 aa10.2□□□□□ -0.78
NIPBL-205ENST00000505998 NSFL1CQ9UNZ2 370 aaKnown RBP10.2□□□□□ -0.78
NIPBL-205ENST00000505998 USP20Q9Y2K6 914 aa10.2□□□□□ -0.78
NIPBL-205ENST00000505998 BMP4P12644 408 aa10.19□□□□□ -0.78
NIPBL-205ENST00000505998 GMPRP36959 345 aa10.19□□□□□ -0.78
NIPBL-205ENST00000505998 RNFT1Q5M7Z0 435 aa10.19□□□□□ -0.78
NIPBL-205ENST00000505998 FAM182BQ5T319 152 aa10.19□□□□□ -0.78
NIPBL-205ENST00000505998 CNTNAP3BQ96NU0 1288 aa10.19□□□□□ -0.78
NIPBL-205ENST00000505998 CNTNAP3Q9BZ76 1288 aa10.19□□□□□ -0.78
NIPBL-205ENST00000505998 PCSK2P16519 638 aa10.18□□□□□ -0.78
NIPBL-205ENST00000505998 DNM1Q05193 864 aaKnown RBP10.18□□□□□ -0.78
NIPBL-205ENST00000505998 LCE2CQ5TA81 110 aa10.18□□□□□ -0.78
NIPBL-205ENST00000505998 EDEM1Q92611 657 aa10.18□□□□□ -0.78
NIPBL-205ENST00000505998 MZF1P28698 734 aaPredicted RBP10.17□□□□□ -0.78
NIPBL-205ENST00000505998 GRNP28799 593 aaKnown RBP10.17□□□□□ -0.78
NIPBL-205ENST00000505998 ARHGAP4P98171 946 aa10.17□□□□□ -0.78
NIPBL-205ENST00000505998 ECM1Q16610 540 aa10.17□□□□□ -0.78
NIPBL-205ENST00000505998 GZF1Q9H116 711 aaPredicted RBP10.17□□□□□ -0.78
NIPBL-205ENST00000505998 FZD6O60353 706 aa10.16□□□□□ -0.78
NIPBL-205ENST00000505998 KRT76Q01546 638 aa10.16□□□□□ -0.78
NIPBL-205ENST00000505998 SPEM2Q0P670 501 aa10.16□□□□□ -0.78
NIPBL-205ENST00000505998 GRIN2CQ14957 1233 aa10.16□□□□□ -0.78
NIPBL-205ENST00000505998 NUDT16Q96DE0 195 aaKnown RBP10.16□□□□□ -0.78
NIPBL-205ENST00000505998 C11orf16Q9NQ32 467 aa10.16□□□□□ -0.78
NIPBL-205ENST00000505998 BRPF3Q9ULD4 1205 aa10.16□□□□□ -0.78
NIPBL-205ENST00000505998 PRR12Q9ULL5 1215 aa10.16□□□□□ -0.78
NIPBL-205ENST00000505998 FNDC3AQ9Y2H6 1198 aaKnown RBP10.16□□□□□ -0.78
NIPBL-205ENST00000505998 IGF1RP08069 1367 aa10.15□□□□□ -0.78
NIPBL-205ENST00000505998 C2CD2LO14523 706 aa10.15□□□□□ -0.78
NIPBL-205ENST00000505998 PDGFAP04085 211 aa10.15□□□□□ -0.78
NIPBL-205ENST00000505998 RPLP1P05386 114 aaKnown RBP10.15□□□□□ -0.78
NIPBL-205ENST00000505998 MAP2K3P46734 347 aa10.15□□□□□ -0.78
NIPBL-205ENST00000505998 NEUROD1Q13562 356 aa10.15□□□□□ -0.78
NIPBL-205ENST00000505998 CCINQ13939 588 aa10.15□□□□□ -0.78
NIPBL-205ENST00000505998 SND1Q7KZF4 910 aaKnown RBP eCLIP10.15□□□□□ -0.78
NIPBL-205ENST00000505998 TTC16Q8NEE8 873 aa10.15□□□□□ -0.78
NIPBL-205ENST00000505998 SLC30A3Q99726 388 aa10.15□□□□□ -0.78
NIPBL-205ENST00000505998 CCDC87Q9NVE4 849 aa10.15□□□□□ -0.78
NIPBL-205ENST00000505998 POLIQ9UNA4 740 aa10.15□□□□□ -0.78
NIPBL-205ENST00000505998 KCNMB2Q9Y691 235 aa10.15□□□□□ -0.78
NIPBL-205ENST00000505998 UBAP1LF5GYI3 381 aa10.14□□□□□ -0.79
NIPBL-205ENST00000505998 NDUFB5O43674 189 aa10.14□□□□□ -0.79
NIPBL-205ENST00000505998 XYLBO75191 536 aa10.14□□□□□ -0.79
NIPBL-205ENST00000505998 SRSF11Q05519 484 aaKnown RBP10.14□□□□□ -0.79
NIPBL-205ENST00000505998 PNMA5Q96PV4 448 aa10.14□□□□□ -0.79
NIPBL-205ENST00000505998 GSX2Q9BZM3 304 aa10.14□□□□□ -0.79
NIPBL-205ENST00000505998 USP5P45974 858 aa10.13□□□□□ -0.79
NIPBL-205ENST00000505998 LCE2AQ5TA79 106 aaPredicted RBP10.13□□□□□ -0.79
NIPBL-205ENST00000505998 EGFRP00533 1210 aa10.12□□□□□ -0.79
NIPBL-205ENST00000505998 TRIM26Q12899 539 aaPredicted RBP10.12□□□□□ -0.79
NIPBL-205ENST00000505998 TRIP4Q15650 581 aaPredicted RBP10.12□□□□□ -0.79
NIPBL-205ENST00000505998 C8orf34Q49A92 452 aa10.12□□□□□ -0.79
NIPBL-205ENST00000505998 KRT25Q7Z3Z0 450 aa10.12□□□□□ -0.79
NIPBL-205ENST00000505998 RAB44Q7Z6P3 723 aaPredicted RBP10.12□□□□□ -0.79
NIPBL-205ENST00000505998 BHMTQ93088 406 aa10.12□□□□□ -0.79
NIPBL-205ENST00000505998 EFCC1Q9HA90 598 aa10.12□□□□□ -0.79
NIPBL-205ENST00000505998 SASH3O75995 380 aa10.11□□□□□ -0.79
NIPBL-205ENST00000505998 ADAMTS2O95450 1211 aa10.11□□□□□ -0.79
NIPBL-205ENST00000505998 ZNF468Q5VIY5 522 aaPredicted RBP10.11□□□□□ -0.79
NIPBL-205ENST00000505998 DCTN4Q9UJW0 460 aa10.11□□□□□ -0.79
NIPBL-205ENST00000505998 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.11□□□□□ -0.79
NIPBL-205ENST00000505998 ARAFP10398 606 aa10.1□□□□□ -0.79
NIPBL-205ENST00000505998 NFKB1P19838 968 aa10.1□□□□□ -0.79
NIPBL-205ENST00000505998 SYT9Q86SS6 491 aa10.1□□□□□ -0.79
NIPBL-205ENST00000505998 AVENQ9NQS1 362 aaPredicted RBP10.1□□□□□ -0.79
NIPBL-205ENST00000505998 TARSP26639 723 aaKnown RBP10.09□□□□□ -0.79
NIPBL-205ENST00000505998 MAPK1P28482 360 aa10.09□□□□□ -0.79
NIPBL-205ENST00000505998 PCBP4P57723 403 aaKnown RBP10.09□□□□□ -0.79
NIPBL-205ENST00000505998 EHHADHQ08426 723 aa10.09□□□□□ -0.79
NIPBL-205ENST00000505998 TMC1Q8TDI8 760 aa10.09□□□□□ -0.79
NIPBL-205ENST00000505998 CITED4Q96RK1 184 aa10.09□□□□□ -0.79
NIPBL-205ENST00000505998 OXCT2Q9BYC2 517 aaPredicted RBP10.09□□□□□ -0.79
NIPBL-205ENST00000505998 GGNBP2Q9H3C7 697 aa10.09□□□□□ -0.79
NIPBL-205ENST00000505998 RARAP10276 462 aa10.08□□□□□ -0.8
NIPBL-205ENST00000505998 ADH6P28332 368 aa10.08□□□□□ -0.8
NIPBL-205ENST00000505998 MARSP56192 900 aaKnown RBP10.08□□□□□ -0.8
NIPBL-205ENST00000505998 PDE12Q6L8Q7 609 aaKnown RBP10.08□□□□□ -0.8
NIPBL-205ENST00000505998 ZNF438Q7Z4V0 828 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms