RNA–Protein interactions for RNA: ENST00000505982.1

CHD1-204, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-204ENST00000505982 SLC9A9Q8IVB4 645 aa10.35□□□□□ -0.75
CHD1-204ENST00000505982 ZNF417Q8TAU3 575 aa10.35□□□□□ -0.75
CHD1-204ENST00000505982 ZNF587Q96SQ5 575 aaPredicted RBP10.35□□□□□ -0.75
CHD1-204ENST00000505982 FAM196BA6NMK8 535 aa10.34□□□□□ -0.75
CHD1-204ENST00000505982 TMEM164Q5U3C3 297 aa10.34□□□□□ -0.75
CHD1-204ENST00000505982 NPM2Q86SE8 214 aaKnown RBP10.34□□□□□ -0.75
CHD1-204ENST00000505982 STK32AQ8WU08 396 aa10.34□□□□□ -0.75
CHD1-204ENST00000505982 TNFRSF25Q93038 417 aa10.34□□□□□ -0.75
CHD1-204ENST00000505982 KRTAP4-8Q9BYQ9 185 aa10.34□□□□□ -0.75
CHD1-204ENST00000505982 ZMIZ1Q9ULJ6 1067 aa10.34□□□□□ -0.75
CHD1-204ENST00000505982 SERTM1A2A2V5 107 aa10.33□□□□□ -0.76
CHD1-204ENST00000505982 EPHA4P54764 986 aa10.33□□□□□ -0.76
CHD1-204ENST00000505982 SFSWAPQ12872 951 aaKnown RBP10.33□□□□□ -0.76
CHD1-204ENST00000505982 TRIM28Q13263 835 aaKnown RBP10.33□□□□□ -0.76
CHD1-204ENST00000505982 RSPO4Q2I0M5 234 aaPredicted RBP10.33□□□□□ -0.76
CHD1-204ENST00000505982 CRTC2Q53ET0 693 aaPredicted RBP10.33□□□□□ -0.76
CHD1-204ENST00000505982 NACC1Q96RE7 527 aa10.33□□□□□ -0.76
CHD1-204ENST00000505982 PRDM6Q9NQX0 595 aa10.33□□□□□ -0.76
CHD1-204ENST00000505982 TNS4Q8IZW8 715 aa10.32□□□□□ -0.76
CHD1-204ENST00000505982 RHPN1Q8TCX5 695 aa10.32□□□□□ -0.76
CHD1-204ENST00000505982 C7orf43Q8WVR3 580 aa10.32□□□□□ -0.76
CHD1-204ENST00000505982 NKAPLQ5M9Q1 402 aa10.31□□□□□ -0.76
CHD1-204ENST00000505982 TBCELQ5QJ74 424 aa10.31□□□□□ -0.76
CHD1-204ENST00000505982 TRIM50Q86XT4 487 aa10.31□□□□□ -0.76
CHD1-204ENST00000505982 FAM200AQ8TCP9 573 aa10.31□□□□□ -0.76
CHD1-204ENST00000505982 PSMG3-AS1Q96PY0 264 aa10.31□□□□□ -0.76
CHD1-204ENST00000505982 SLC30A3Q99726 388 aa10.31□□□□□ -0.76
CHD1-204ENST00000505982 CHMP3Q9Y3E7 222 aa10.31□□□□□ -0.76
CHD1-204ENST00000505982 IVNS1ABPQ9Y6Y0 642 aa10.31□□□□□ -0.76
CHD1-204ENST00000505982 SPEM2Q0P670 501 aa10.3□□□□□ -0.76
CHD1-204ENST00000505982 MICALL1Q8N3F8 863 aa10.3□□□□□ -0.76
CHD1-204ENST00000505982 TPSG1Q9NRR2 321 aa10.3□□□□□ -0.76
CHD1-204ENST00000505982 ANKIB1Q9P2G1 1089 aa10.3□□□□□ -0.76
CHD1-204ENST00000505982 STARD13Q9Y3M8 1113 aa10.3□□□□□ -0.76
CHD1-204ENST00000505982 ATP1A2P50993 1020 aa10.29□□□□□ -0.76
CHD1-204ENST00000505982 MFAP1P55081 439 aaKnown RBP10.29□□□□□ -0.76
CHD1-204ENST00000505982 PTK7Q13308 1070 aa10.29□□□□□ -0.76
CHD1-204ENST00000505982 COL9A3Q14050 684 aaPredicted RBP10.29□□□□□ -0.76
CHD1-204ENST00000505982 C1orf53Q5VUE5 145 aa10.29□□□□□ -0.76
CHD1-204ENST00000505982 OGFOD1Q8N543 542 aa10.29□□□□□ -0.76
CHD1-204ENST00000505982 ZNF594Q96JF6 807 aaPredicted RBP10.29□□□□□ -0.76
CHD1-204ENST00000505982 FAM229AH3BQW9 127 aa10.28□□□□□ -0.76
CHD1-204ENST00000505982 ALBP02768 609 aa10.28□□□□□ -0.76
CHD1-204ENST00000505982 ADH7P40394 386 aa10.28□□□□□ -0.76
CHD1-204ENST00000505982 ANKMY2Q8IV38 441 aa10.28□□□□□ -0.76
CHD1-204ENST00000505982 CEP63Q96MT8 703 aa10.28□□□□□ -0.76
CHD1-204ENST00000505982 BRD7Q9NPI1 651 aa10.28□□□□□ -0.76
CHD1-204ENST00000505982 SCO2A0A1W2PP80 73 aa10.27□□□□□ -0.77
CHD1-204ENST00000505982 PSMA6P60900 246 aaKnown RBP10.27□□□□□ -0.77
CHD1-204ENST00000505982 SH3PXD2AQ5TCZ1 1133 aa10.27□□□□□ -0.77
CHD1-204ENST00000505982 RBM19Q9Y4C8 960 aaKnown RBP10.27□□□□□ -0.77
CHD1-204ENST00000505982 C8orf86Q6ZUL3 223 aa10.26□□□□□ -0.77
CHD1-204ENST00000505982 TPCN2Q8NHX9 752 aa10.26□□□□□ -0.77
CHD1-204ENST00000505982 SFI1A8K8P3 1242 aa10.25□□□□□ -0.77
CHD1-204ENST00000505982 DYRK3O43781 588 aa10.25□□□□□ -0.77
CHD1-204ENST00000505982 NID1P14543 1247 aa10.25□□□□□ -0.77
CHD1-204ENST00000505982 KCNQ4P56696 695 aa10.25□□□□□ -0.77
CHD1-204ENST00000505982 DPYDQ12882 1025 aa10.25□□□□□ -0.77
CHD1-204ENST00000505982 GRIK4Q16099 956 aa10.25□□□□□ -0.77
CHD1-204ENST00000505982 TRAPPC3LQ5T215 181 aa10.25□□□□□ -0.77
CHD1-204ENST00000505982 RAB44Q7Z6P3 723 aaPredicted RBP10.25□□□□□ -0.77
CHD1-204ENST00000505982 KCNH4Q9UQ05 1017 aa10.25□□□□□ -0.77
CHD1-204ENST00000505982 HCN4Q9Y3Q4 1203 aa10.25□□□□□ -0.77
CHD1-204ENST00000505982 C9orf172C9J069 976 aa10.24□□□□□ -0.77
CHD1-204ENST00000505982 ZBTB7BO15156 539 aaPredicted RBP10.24□□□□□ -0.77
CHD1-204ENST00000505982 HIRAP54198 1017 aaPredicted RBP10.24□□□□□ -0.77
CHD1-204ENST00000505982 CLDN10P78369 228 aa10.24□□□□□ -0.77
CHD1-204ENST00000505982 CCDC102BQ68D86 513 aa10.24□□□□□ -0.77
CHD1-204ENST00000505982 LILRB5O75023 590 aa10.23□□□□□ -0.77
CHD1-204ENST00000505982 C20orf204Q6ZNR8 217 aa10.23□□□□□ -0.77
CHD1-204ENST00000505982 CCER1Q8TC90 406 aaPredicted RBP10.23□□□□□ -0.77
CHD1-204ENST00000505982 HSH2DQ96JZ2 352 aa10.23□□□□□ -0.77
CHD1-204ENST00000505982 PHACTR1Q9C0D0 580 aa10.23□□□□□ -0.77
CHD1-204ENST00000505982 TSPAN10Q9H1Z9 355 aaPredicted RBP10.23□□□□□ -0.77
CHD1-204ENST00000505982 LARGE2Q8N3Y3 721 aa10.22□□□□□ -0.77
CHD1-204ENST00000505982 M0R2N6 131 aa10.21□□□□□ -0.77
CHD1-204ENST00000505982 POTEAQ6S8J7 498 aa10.21□□□□□ -0.77
CHD1-204ENST00000505982 CLP1Q92989 425 aaKnown RBP10.21□□□□□ -0.77
CHD1-204ENST00000505982 SUSD3Q96L08 255 aa10.21□□□□□ -0.77
CHD1-204ENST00000505982 KIAA1024Q9UPX6 916 aa10.21□□□□□ -0.77
CHD1-204ENST00000505982 MTMR7Q9Y216 660 aa10.21□□□□□ -0.77
CHD1-204ENST00000505982 TYRO3Q06418 890 aa10.2□□□□□ -0.78
CHD1-204ENST00000505982 SWI5Q1ZZU3 235 aa10.2□□□□□ -0.78
CHD1-204ENST00000505982 FOXD4L6Q3SYB3 417 aaPredicted RBP10.2□□□□□ -0.78
CHD1-204ENST00000505982 PRSS36Q5K4E3 855 aa10.2□□□□□ -0.78
CHD1-204ENST00000505982 FOXD4L3Q6VB84 417 aaPredicted RBP10.2□□□□□ -0.78
CHD1-204ENST00000505982 SND1Q7KZF4 910 aaKnown RBP eCLIP10.2□□□□□ -0.78
CHD1-204ENST00000505982 BHMTQ93088 406 aa10.2□□□□□ -0.78
CHD1-204ENST00000505982 ATP2B4P23634 1241 aa10.19□□□□□ -0.78
CHD1-204ENST00000505982 HIF1AQ16665 826 aa10.19□□□□□ -0.78
CHD1-204ENST00000505982 CCDC27Q2M243 656 aa10.19□□□□□ -0.78
CHD1-204ENST00000505982 ARTNQ5T4W7 220 aa10.19□□□□□ -0.78
CHD1-204ENST00000505982 ZNF280CQ8ND82 737 aa10.19□□□□□ -0.78
CHD1-204ENST00000505982 UBE2OQ9C0C9 1292 aaKnown RBP10.19□□□□□ -0.78
CHD1-204ENST00000505982 EFCC1Q9HA90 598 aa10.19□□□□□ -0.78
CHD1-204ENST00000505982 ZFP64Q9NPA5 681 aa10.19□□□□□ -0.78
CHD1-204ENST00000505982 GNEQ9Y223 722 aaKnown RBP10.19□□□□□ -0.78
CHD1-204ENST00000505982 ELNP15502 786 aa10.18□□□□□ -0.78
CHD1-204ENST00000505982 SSFA2P28290 1259 aa10.18□□□□□ -0.78
CHD1-204ENST00000505982 SEC13P55735 322 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms