RNA–Protein interactions for RNA: ENST00000505957.1

CPNE4-206, Transcript of copine 4, humanhuman

TSL 3

Gene CPNE4, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-206ENST00000505957 MCM10Q7L590 875 aa13.97□□□□□ -0.17
CPNE4-206ENST00000505957 SNED1Q8TER0 1413 aa13.97□□□□□ -0.17
CPNE4-206ENST00000505957 ADAMTSL1Q8N6G6 1762 aa13.96□□□□□ -0.17
CPNE4-206ENST00000505957 RNF123Q5XPI4 1314 aa13.96□□□□□ -0.17
CPNE4-206ENST00000505957 ERVV-1B6SEH8 477 aa13.96□□□□□ -0.17
CPNE4-206ENST00000505957 GTF2E1P29083 439 aaPredicted RBP13.96□□□□□ -0.17
CPNE4-206ENST00000505957 TAF7Q15545 349 aaPredicted RBP13.96□□□□□ -0.17
CPNE4-206ENST00000505957 HLFQ16534 295 aa13.96□□□□□ -0.17
CPNE4-206ENST00000505957 GRIPAP1Q4V328 841 aa13.96□□□□□ -0.17
CPNE4-206ENST00000505957 JDP2Q8WYK2 163 aa13.96□□□□□ -0.17
CPNE4-206ENST00000505957 NYXQ9GZU5 481 aa13.96□□□□□ -0.17
CPNE4-206ENST00000505957 U2AF1L5P0DN76 240 aaPredicted RBP13.95□□□□□ -0.18
CPNE4-206ENST00000505957 U2AF1Q01081 240 aaKnown RBP eCLIP13.95□□□□□ -0.18
CPNE4-206ENST00000505957 MAP2K1Q02750 393 aaPredicted RBP13.95□□□□□ -0.18
CPNE4-206ENST00000505957 MAP1SQ66K74 1059 aaPredicted RBP13.95□□□□□ -0.18
CPNE4-206ENST00000505957 CACNA1SQ13698 1873 aa13.95□□□□□ -0.18
CPNE4-206ENST00000505957 FAM177BA6PVY3 158 aa13.94□□□□□ -0.18
CPNE4-206ENST00000505957 HOXA10P31260 410 aaPredicted RBP13.94□□□□□ -0.18
CPNE4-206ENST00000505957 LBX1P52954 281 aa13.94□□□□□ -0.18
CPNE4-206ENST00000505957 EIF6P56537 245 aaKnown RBP13.94□□□□□ -0.18
CPNE4-206ENST00000505957 RUNDC1Q96C34 613 aa13.94□□□□□ -0.18
CPNE4-206ENST00000505957 WDR33Q9C0J8 1336 aaKnown RBP13.93□□□□□ -0.18
CPNE4-206ENST00000505957 RIC1Q4ADV7 1423 aa13.93□□□□□ -0.18
CPNE4-206ENST00000505957 DCTN1Q14203 1278 aa13.93□□□□□ -0.18
CPNE4-206ENST00000505957 DDX21Q9NR30 783 aaKnown RBP eCLIP13.93□□□□□ -0.18
CPNE4-206ENST00000505957 IBTKQ9P2D0 1353 aaPredicted RBP13.93□□□□□ -0.18
CPNE4-206ENST00000505957 HSPA8P11142 646 aaKnown RBP13.92□□□□□ -0.18
CPNE4-206ENST00000505957 LMOD1P29536 600 aaPredicted RBP13.92□□□□□ -0.18
CPNE4-206ENST00000505957 MAP3K15Q6ZN16 1313 aa13.91□□□□□ -0.18
CPNE4-206ENST00000505957 NEFLP07196 543 aa13.91□□□□□ -0.18
CPNE4-206ENST00000505957 CCDC27Q2M243 656 aa13.91□□□□□ -0.18
CPNE4-206ENST00000505957 ERICH6BQ5W0A0 696 aa13.91□□□□□ -0.18
CPNE4-206ENST00000505957 NUTM1Q86Y26 1132 aa13.91□□□□□ -0.18
CPNE4-206ENST00000505957 RPGRQ92834 1020 aaKnown RBP13.91□□□□□ -0.18
CPNE4-206ENST00000505957 CRAMP1Q96RY5 1269 aa13.91□□□□□ -0.18
CPNE4-206ENST00000505957 PNNQ9H307 717 aaKnown RBP13.91□□□□□ -0.18
CPNE4-206ENST00000505957 ABT1Q9ULW3 272 aaKnown RBP13.91□□□□□ -0.18
CPNE4-206ENST00000505957 ABCC12Q96J65 1359 aa13.91□□□□□ -0.18
CPNE4-206ENST00000505957 SCNN1DP51172 638 aa13.9□□□□□ -0.18
CPNE4-206ENST00000505957 KIF6Q6ZMV9 814 aa13.9□□□□□ -0.18
CPNE4-206ENST00000505957 USP50Q70EL3 339 aaPredicted RBP13.9□□□□□ -0.18
CPNE4-206ENST00000505957 LARGE2Q8N3Y3 721 aa13.9□□□□□ -0.18
CPNE4-206ENST00000505957 RBM17Q96I25 401 aaKnown RBP13.9□□□□□ -0.18
CPNE4-206ENST00000505957 VPS33BQ9H267 617 aa13.9□□□□□ -0.18
CPNE4-206ENST00000505957 MIS18AQ9NYP9 233 aa13.9□□□□□ -0.18
CPNE4-206ENST00000505957 GJA3Q9Y6H8 435 aa13.9□□□□□ -0.18
CPNE4-206ENST00000505957 APAF1O14727 1248 aa13.89□□□□□ -0.19
CPNE4-206ENST00000505957 EPS15P42566 896 aa13.89□□□□□ -0.19
CPNE4-206ENST00000505957 ECE1P42892 770 aa13.89□□□□□ -0.19
CPNE4-206ENST00000505957 ZNF34Q8IZ26 560 aa13.89□□□□□ -0.19
CPNE4-206ENST00000505957 ABHD8Q96I13 439 aa13.89□□□□□ -0.19
CPNE4-206ENST00000505957 EIF4A1P60842 406 aaKnown RBP13.88□□□□□ -0.19
CPNE4-206ENST00000505957 SUSD4Q5VX71 490 aa13.88□□□□□ -0.19
CPNE4-206ENST00000505957 TTLL7Q6ZT98 887 aa13.88□□□□□ -0.19
CPNE4-206ENST00000505957 CAPNS2Q96L46 248 aa13.88□□□□□ -0.19
CPNE4-206ENST00000505957 PLEKHF1Q96S99 279 aa13.88□□□□□ -0.19
CPNE4-206ENST00000505957 SUPT16HQ9Y5B9 1047 aaKnown RBP13.88□□□□□ -0.19
CPNE4-206ENST00000505957 LAMB4A4D0S4 1761 aa13.88□□□□□ -0.19
CPNE4-206ENST00000505957 COL4A5P29400 1685 aa13.88□□□□□ -0.19
CPNE4-206ENST00000505957 UBN2Q6ZU65 1347 aa13.88□□□□□ -0.19
CPNE4-206ENST00000505957 PPEF1O14829 653 aaPredicted RBP13.87□□□□□ -0.19
CPNE4-206ENST00000505957 NEFMP07197 916 aa13.87□□□□□ -0.19
CPNE4-206ENST00000505957 GOLGA2Q08379 1002 aa13.87□□□□□ -0.19
CPNE4-206ENST00000505957 GIGYF2Q6Y7W6 1299 aaKnown RBP13.87□□□□□ -0.19
CPNE4-206ENST00000505957 NIM1KQ8IY84 436 aa13.87□□□□□ -0.19
CPNE4-206ENST00000505957 CCDC146Q8IYE0 955 aa13.87□□□□□ -0.19
CPNE4-206ENST00000505957 TRMT2AQ8IZ69 625 aaKnown RBP13.87□□□□□ -0.19
CPNE4-206ENST00000505957 BEGAINQ9BUH8 593 aa13.87□□□□□ -0.19
CPNE4-206ENST00000505957 RRP7AQ9Y3A4 280 aaKnown RBP13.87□□□□□ -0.19
CPNE4-206ENST00000505957 TLL2Q9Y6L7 1015 aa13.87□□□□□ -0.19
CPNE4-206ENST00000505957 ERBB4Q15303 1308 aa13.87□□□□□ -0.19
CPNE4-206ENST00000505957 NTSR2O95665 410 aa13.86□□□□□ -0.19
CPNE4-206ENST00000505957 GPTP24298 496 aa13.86□□□□□ -0.19
CPNE4-206ENST00000505957 MAP2K2P36507 400 aa13.86□□□□□ -0.19
CPNE4-206ENST00000505957 PARP10Q53GL7 1025 aa13.86□□□□□ -0.19
CPNE4-206ENST00000505957 CST9Q5W186 159 aa13.86□□□□□ -0.19
CPNE4-206ENST00000505957 PPP1R42Q7Z4L9 355 aa13.86□□□□□ -0.19
CPNE4-206ENST00000505957 GPR101Q96P66 508 aaPredicted RBP13.86□□□□□ -0.19
CPNE4-206ENST00000505957 TMX4Q9H1E5 349 aaPredicted RBP13.86□□□□□ -0.19
CPNE4-206ENST00000505957 ADARB2Q9NS39 739 aaKnown RBP13.86□□□□□ -0.19
CPNE4-206ENST00000505957 LTBP1Q14766 1721 aa13.86□□□□□ -0.19
CPNE4-206ENST00000505957 E9PSI1 815 aa13.85□□□□□ -0.19
CPNE4-206ENST00000505957 PPIP5K2O43314 1243 aa13.85□□□□□ -0.19
CPNE4-206ENST00000505957 MYL6BP14649 208 aa13.85□□□□□ -0.19
CPNE4-206ENST00000505957 SLC10A5Q5PT55 438 aa13.85□□□□□ -0.19
CPNE4-206ENST00000505957 NLRP3Q96P20 1036 aa13.85□□□□□ -0.19
CPNE4-206ENST00000505957 RTFDC1Q9BY42 306 aaPredicted RBP13.85□□□□□ -0.19
CPNE4-206ENST00000505957 ZBTB3Q9H5J0 574 aa13.85□□□□□ -0.19
CPNE4-206ENST00000505957 GPRC5DQ9NZD1 345 aa13.85□□□□□ -0.19
CPNE4-206ENST00000505957 ATP6V0A2Q9Y487 856 aa13.85□□□□□ -0.19
CPNE4-206ENST00000505957 THSD7BQ9C0I4 1608 aa13.85□□□□□ -0.19
CPNE4-206ENST00000505957 KDM3BQ7LBC6 1761 aa13.84□□□□□ -0.19
CPNE4-206ENST00000505957 FMR1Q06787 632 aaKnown RBP eCLIP13.84□□□□□ -0.19
CPNE4-206ENST00000505957 SLFN5Q08AF3 891 aa13.84□□□□□ -0.19
CPNE4-206ENST00000505957 DUSP27Q5VZP5 1158 aa13.84□□□□□ -0.19
CPNE4-206ENST00000505957 CYP4F22Q6NT55 531 aa13.84□□□□□ -0.19
CPNE4-206ENST00000505957 WDR63Q8IWG1 891 aa13.84□□□□□ -0.19
CPNE4-206ENST00000505957 SUPT20HQ8NEM7 779 aa13.84□□□□□ -0.19
CPNE4-206ENST00000505957 HHIPL1Q96JK4 782 aa13.84□□□□□ -0.19
CPNE4-206ENST00000505957 ZNRF3Q9ULT6 936 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms