RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 MAP3K2Q9Y2U5 619 aa14.17□□□□□ -0.14
UBE3D-206ENST00000505226 KIF3AQ9Y496 699 aa14.17□□□□□ -0.14
UBE3D-206ENST00000505226 SLC27A2O14975 620 aa14.17□□□□□ -0.14
UBE3D-206ENST00000505226 CCDC192P0DO97 292 aa14.17□□□□□ -0.14
UBE3D-206ENST00000505226 PTGS1P23219 599 aa14.17□□□□□ -0.14
UBE3D-206ENST00000505226 CKAP2LQ8IYA6 745 aa14.17□□□□□ -0.14
UBE3D-206ENST00000505226 EAF2Q96CJ1 260 aaPredicted RBP14.17□□□□□ -0.14
UBE3D-206ENST00000505226 TFIP11Q9UBB9 837 aaKnown RBP14.17□□□□□ -0.14
UBE3D-206ENST00000505226 A0A0D9SFI3 127 aa14.17□□□□□ -0.14
UBE3D-206ENST00000505226 RIOK3O14730 519 aaKnown RBP14.17□□□□□ -0.14
UBE3D-206ENST00000505226 IFIT2P09913 472 aaKnown RBP14.16□□□□□ -0.14
UBE3D-206ENST00000505226 MPRIPQ6WCQ1 1025 aa14.16□□□□□ -0.14
UBE3D-206ENST00000505226 EVI5LQ96CN4 794 aa14.16□□□□□ -0.14
UBE3D-206ENST00000505226 CCDC8Q9H0W5 538 aaPredicted RBP14.16□□□□□ -0.14
UBE3D-206ENST00000505226 KDM3BQ7LBC6 1761 aa14.16□□□□□ -0.14
UBE3D-206ENST00000505226 TYRO3Q06418 890 aa14.16□□□□□ -0.14
UBE3D-206ENST00000505226 NRBP1Q9UHY1 535 aa14.16□□□□□ -0.14
UBE3D-206ENST00000505226 NPHP4O75161 1426 aaPredicted RBP14.16□□□□□ -0.14
UBE3D-206ENST00000505226 TOB2Q14106 344 aaPredicted RBP14.16□□□□□ -0.14
UBE3D-206ENST00000505226 BTBD11A6QL63 1104 aa14.15□□□□□ -0.14
UBE3D-206ENST00000505226 ZSCAN20P17040 1043 aaPredicted RBP14.15□□□□□ -0.14
UBE3D-206ENST00000505226 LRMPQ12912 555 aa14.15□□□□□ -0.14
UBE3D-206ENST00000505226 LARP1Q6PKG0 1096 aaKnown RBP14.15□□□□□ -0.14
UBE3D-206ENST00000505226 FAM200AQ8TCP9 573 aa14.15□□□□□ -0.14
UBE3D-206ENST00000505226 DACT1Q9NYF0 836 aa14.15□□□□□ -0.14
UBE3D-206ENST00000505226 C9orf78Q9NZ63 289 aaPredicted RBP14.15□□□□□ -0.14
UBE3D-206ENST00000505226 HOXB7P09629 217 aa14.15□□□□□ -0.14
UBE3D-206ENST00000505226 CBX1P83916 185 aa14.15□□□□□ -0.14
UBE3D-206ENST00000505226 PPP4R3BQ5MIZ7 849 aa14.15□□□□□ -0.14
UBE3D-206ENST00000505226 ZKSCAN1P17029 563 aaPredicted RBP14.14□□□□□ -0.15
UBE3D-206ENST00000505226 KRT85P78386 507 aa14.14□□□□□ -0.15
UBE3D-206ENST00000505226 MAP3K11Q16584 847 aa14.14□□□□□ -0.15
UBE3D-206ENST00000505226 ZNF589Q86UQ0 364 aaPredicted RBP14.14□□□□□ -0.15
UBE3D-206ENST00000505226 LRRC59Q96AG4 307 aaKnown RBP14.14□□□□□ -0.15
UBE3D-206ENST00000505226 SUCLG2Q96I99 432 aa14.14□□□□□ -0.15
UBE3D-206ENST00000505226 NUP62CLQ9H1M0 184 aa14.14□□□□□ -0.15
UBE3D-206ENST00000505226 CBX8Q9HC52 389 aa14.14□□□□□ -0.15
UBE3D-206ENST00000505226 TBX22Q9Y458 520 aa14.14□□□□□ -0.15
UBE3D-206ENST00000505226 C14orf37Q86TY3 774 aa14.14□□□□□ -0.15
UBE3D-206ENST00000505226 KCNJ4P48050 445 aa14.14□□□□□ -0.15
UBE3D-206ENST00000505226 STK3Q13188 491 aa14.14□□□□□ -0.15
UBE3D-206ENST00000505226 ANO6Q4KMQ2 910 aa14.14□□□□□ -0.15
UBE3D-206ENST00000505226 KLHDC4Q8TBB5 520 aa14.14□□□□□ -0.15
UBE3D-206ENST00000505226 EDC3Q96F86 508 aaKnown RBP14.14□□□□□ -0.15
UBE3D-206ENST00000505226 BOLA2Q9H3K6 86 aa14.14□□□□□ -0.15
UBE3D-206ENST00000505226 ELP1O95163 1332 aa14.13□□□□□ -0.15
UBE3D-206ENST00000505226 CHGBP05060 677 aa14.13□□□□□ -0.15
UBE3D-206ENST00000505226 PGBD1Q96JS3 809 aa14.13□□□□□ -0.15
UBE3D-206ENST00000505226 BICC1Q9H694 974 aaKnown RBP14.13□□□□□ -0.15
UBE3D-206ENST00000505226 SNRKQ9NRH2 765 aa14.13□□□□□ -0.15
UBE3D-206ENST00000505226 CCDC186Q7Z3E2 898 aa14.13□□□□□ -0.15
UBE3D-206ENST00000505226 KLHL34Q8N239 644 aa14.13□□□□□ -0.15
UBE3D-206ENST00000505226 DBF4Q9UBU7 674 aaPredicted RBP14.13□□□□□ -0.15
UBE3D-206ENST00000505226 EID1Q9Y6B2 187 aa14.13□□□□□ -0.15
UBE3D-206ENST00000505226 RGPD2P0DJD1 1756 aa14.13□□□□□ -0.15
UBE3D-206ENST00000505226 NR1I2O75469 434 aa14.12□□□□□ -0.15
UBE3D-206ENST00000505226 KCNA6P17658 529 aa14.12□□□□□ -0.15
UBE3D-206ENST00000505226 IP6K1Q92551 441 aa14.12□□□□□ -0.15
UBE3D-206ENST00000505226 CHD2O14647 1828 aaKnown RBP14.12□□□□□ -0.15
UBE3D-206ENST00000505226 LTN1O94822 1766 aa14.12□□□□□ -0.15
UBE3D-206ENST00000505226 GIGYF1O75420 1035 aaPredicted RBP14.12□□□□□ -0.15
UBE3D-206ENST00000505226 RPS6KB1P23443 525 aa14.12□□□□□ -0.15
UBE3D-206ENST00000505226 KSR2Q6VAB6 950 aa14.12□□□□□ -0.15
UBE3D-206ENST00000505226 LEO1Q8WVC0 666 aaPredicted RBP14.12□□□□□ -0.15
UBE3D-206ENST00000505226 SIL1Q9H173 461 aa14.12□□□□□ -0.15
UBE3D-206ENST00000505226 COL15A1P39059 1388 aa14.12□□□□□ -0.15
UBE3D-206ENST00000505226 JAK2O60674 1132 aa14.12□□□□□ -0.15
UBE3D-206ENST00000505226 TEFQ10587 303 aa14.12□□□□□ -0.15
UBE3D-206ENST00000505226 GPATCH3Q96I76 525 aa14.12□□□□□ -0.15
UBE3D-206ENST00000505226 TNMDQ9H2S6 317 aa14.12□□□□□ -0.15
UBE3D-206ENST00000505226 CTIFO43310 598 aaKnown RBP14.11□□□□□ -0.15
UBE3D-206ENST00000505226 ALDH1L1O75891 902 aa14.11□□□□□ -0.15
UBE3D-206ENST00000505226 ZNF530Q6P9A1 599 aaPredicted RBP14.11□□□□□ -0.15
UBE3D-206ENST00000505226 RBM43Q6ZSC3 357 aaKnown RBP14.11□□□□□ -0.15
UBE3D-206ENST00000505226 ANKRD7Q92527 254 aa14.11□□□□□ -0.15
UBE3D-206ENST00000505226 SPDYE4A6NLX3 237 aa14.11□□□□□ -0.15
UBE3D-206ENST00000505226 BLOC1S2Q6QNY1 142 aa14.11□□□□□ -0.15
UBE3D-206ENST00000505226 DDX11Q96FC9 970 aa14.11□□□□□ -0.15
UBE3D-206ENST00000505226 SPATA32Q96LK8 384 aa14.11□□□□□ -0.15
UBE3D-206ENST00000505226 MED23Q9ULK4 1368 aa14.11□□□□□ -0.15
UBE3D-206ENST00000505226 PXDNQ92626 1479 aa14.11□□□□□ -0.15
UBE3D-206ENST00000505226 ERC1Q8IUD2 1116 aa14.1□□□□□ -0.15
UBE3D-206ENST00000505226 ZHX1Q9UKY1 873 aaPredicted RBP14.1□□□□□ -0.15
UBE3D-206ENST00000505226 PLA2G4DQ86XP0 818 aa14.1□□□□□ -0.15
UBE3D-206ENST00000505226 NDUFB9Q9Y6M9 179 aa14.1□□□□□ -0.15
UBE3D-206ENST00000505226 USP54Q70EL1 1684 aa14.1□□□□□ -0.15
UBE3D-206ENST00000505226 GRM8O00222 908 aa14.1□□□□□ -0.15
UBE3D-206ENST00000505226 TPM3P06753 285 aa14.1□□□□□ -0.15
UBE3D-206ENST00000505226 PSMA5P28066 241 aa14.1□□□□□ -0.15
UBE3D-206ENST00000505226 DMTNQ08495 405 aa14.1□□□□□ -0.15
UBE3D-206ENST00000505226 FSD1Q9BTV5 496 aa14.1□□□□□ -0.15
UBE3D-206ENST00000505226 ZNF75DP51815 510 aa14.09□□□□□ -0.15
UBE3D-206ENST00000505226 AKAP4Q5JQC9 854 aa14.09□□□□□ -0.15
UBE3D-206ENST00000505226 RBM33Q96EV2 1170 aaKnown RBP14.09□□□□□ -0.15
UBE3D-206ENST00000505226 CLSTN2Q9H4D0 955 aa14.09□□□□□ -0.15
UBE3D-206ENST00000505226 GOLGA6L6A8MZA4 724 aa14.09□□□□□ -0.15
UBE3D-206ENST00000505226 RNMTO43148 476 aaKnown RBP14.09□□□□□ -0.15
UBE3D-206ENST00000505226 U2AF2P26368 475 aaKnown RBP eCLIP14.09□□□□□ -0.15
UBE3D-206ENST00000505226 AIMP1Q12904 312 aaKnown RBP14.09□□□□□ -0.15
UBE3D-206ENST00000505226 CCDC144BQ3MJ40 725 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms