RNA–Protein interactions for RNA: ENST00000505081.5

DDX41-205, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,949 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-205ENST00000505081 G3BP1Q13283 466 aaKnown RBP eCLIP19.18■□□□□ 0.66
DDX41-205ENST00000505081 CHMP3Q9Y3E7 222 aa19.18■□□□□ 0.66
DDX41-205ENST00000505081 UQCRHLA0A096LP55 91 aa19.17■□□□□ 0.66
DDX41-205ENST00000505081 ADCY5O95622 1261 aa19.17■□□□□ 0.66
DDX41-205ENST00000505081 UQCRHP07919 91 aa19.17■□□□□ 0.66
DDX41-205ENST00000505081 PIP4K2AP48426 406 aaPredicted RBP19.17■□□□□ 0.66
DDX41-205ENST00000505081 PLCB2Q00722 1185 aa19.17■□□□□ 0.66
DDX41-205ENST00000505081 ERC1Q8IUD2 1116 aa19.17■□□□□ 0.66
DDX41-205ENST00000505081 C17orf53Q8N3J3 647 aaPredicted RBP19.17■□□□□ 0.66
DDX41-205ENST00000505081 IGKV5-2P06315 115 aa19.17■□□□□ 0.66
DDX41-205ENST00000505081 MCM5P33992 734 aa19.17■□□□□ 0.66
DDX41-205ENST00000505081 PDIA6Q15084 440 aa19.17■□□□□ 0.66
DDX41-205ENST00000505081 LINS1Q8NG48 757 aa19.17■□□□□ 0.66
DDX41-205ENST00000505081 CHMP4AQ9BY43 222 aa19.17■□□□□ 0.66
DDX41-205ENST00000505081 TTC12Q9H892 705 aaPredicted RBP19.16■□□□□ 0.66
DDX41-205ENST00000505081 SLC27A2O14975 620 aa19.16■□□□□ 0.66
DDX41-205ENST00000505081 ZKSCAN1P17029 563 aaPredicted RBP19.16■□□□□ 0.66
DDX41-205ENST00000505081 EPHA10Q5JZY3 1008 aa19.16■□□□□ 0.66
DDX41-205ENST00000505081 KCNB2Q92953 911 aa19.16■□□□□ 0.66
DDX41-205ENST00000505081 FAM13BQ9NYF5 915 aa19.16■□□□□ 0.66
DDX41-205ENST00000505081 NDUFB9Q9Y6M9 179 aa19.16■□□□□ 0.66
DDX41-205ENST00000505081 HEG1Q9ULI3 1381 aa19.15■□□□□ 0.66
DDX41-205ENST00000505081 MAP4K1Q92918 833 aa19.15■□□□□ 0.66
DDX41-205ENST00000505081 FSD1Q9BTV5 496 aa19.15■□□□□ 0.66
DDX41-205ENST00000505081 CHGBP05060 677 aa19.15■□□□□ 0.66
DDX41-205ENST00000505081 RIC3Q7Z5B4 369 aa19.15■□□□□ 0.66
DDX41-205ENST00000505081 TM6SF1Q9BZW5 370 aa19.15■□□□□ 0.66
DDX41-205ENST00000505081 ZNF589Q86UQ0 364 aaPredicted RBP19.14■□□□□ 0.66
DDX41-205ENST00000505081 AP5Z1O43299 807 aa19.14■□□□□ 0.65
DDX41-205ENST00000505081 CDC37L1Q7L3B6 337 aa19.14■□□□□ 0.65
DDX41-205ENST00000505081 ZSCAN31Q96LW9 406 aaPredicted RBP19.14■□□□□ 0.65
DDX41-205ENST00000505081 ATP6V1DQ9Y5K8 247 aa19.14■□□□□ 0.65
DDX41-205ENST00000505081 FAM184AQ8NB25 1140 aa19.14■□□□□ 0.65
DDX41-205ENST00000505081 DDX21Q9NR30 783 aaKnown RBP eCLIP19.14■□□□□ 0.65
DDX41-205ENST00000505081 SH2B1Q9NRF2 756 aaPredicted RBP19.14■□□□□ 0.65
DDX41-205ENST00000505081 STK3Q13188 491 aa19.13■□□□□ 0.65
DDX41-205ENST00000505081 LARP1BQ659C4 914 aaKnown RBP19.13■□□□□ 0.65
DDX41-205ENST00000505081 ANKLE2Q86XL3 938 aa19.13■□□□□ 0.65
DDX41-205ENST00000505081 FUCA2Q9BTY2 467 aa19.13■□□□□ 0.65
DDX41-205ENST00000505081 KIAA2012Q0VF49 1180 aa19.13■□□□□ 0.65
DDX41-205ENST00000505081 CSPP1Q1MSJ5 1256 aa19.13■□□□□ 0.65
DDX41-205ENST00000505081 UVSSAQ2YD98 709 aa19.13■□□□□ 0.65
DDX41-205ENST00000505081 ZC3H6P61129 1189 aaKnown RBP19.12■□□□□ 0.65
DDX41-205ENST00000505081 CHD2O14647 1828 aaKnown RBP19.12■□□□□ 0.65
DDX41-205ENST00000505081 TERF1P54274 439 aa19.12■□□□□ 0.65
DDX41-205ENST00000505081 TTC6Q86TZ1 520 aa19.12■□□□□ 0.65
DDX41-205ENST00000505081 XAGE3Q8WTP9 111 aa19.11■□□□□ 0.65
DDX41-205ENST00000505081 MYD88Q99836 296 aa19.11■□□□□ 0.65
DDX41-205ENST00000505081 DDX58O95786 925 aaKnown RBP19.11■□□□□ 0.65
DDX41-205ENST00000505081 VSIG10Q8N0Z9 540 aa19.11■□□□□ 0.65
DDX41-205ENST00000505081 UTYO14607 1347 aa19.11■□□□□ 0.65
DDX41-205ENST00000505081 COPS6Q7L5N1 327 aa19.11■□□□□ 0.65
DDX41-205ENST00000505081 KDM4AO75164 1064 aa19.1■□□□□ 0.65
DDX41-205ENST00000505081 CAMK4Q16566 473 aa19.1■□□□□ 0.65
DDX41-205ENST00000505081 NPHP4O75161 1426 aaPredicted RBP19.1■□□□□ 0.65
DDX41-205ENST00000505081 ADGRL3Q9HAR2 1447 aa19.1■□□□□ 0.65
DDX41-205ENST00000505081 NEURL1BA8MQ27 555 aa19.1■□□□□ 0.65
DDX41-205ENST00000505081 LETM1O95202 739 aaPredicted RBP19.1■□□□□ 0.65
DDX41-205ENST00000505081 DNTTIP2Q5QJE6 756 aaKnown RBP19.1■□□□□ 0.65
DDX41-205ENST00000505081 BLOC1S2Q6QNY1 142 aa19.1■□□□□ 0.65
DDX41-205ENST00000505081 NFATC2IPQ8NCF5 419 aa19.1■□□□□ 0.65
DDX41-205ENST00000505081 ARID3AQ99856 593 aa19.1■□□□□ 0.65
DDX41-205ENST00000505081 TFIP11Q9UBB9 837 aaKnown RBP19.1■□□□□ 0.65
DDX41-205ENST00000505081 CCDC9Q9Y3X0 531 aaKnown RBP19.1■□□□□ 0.65
DDX41-205ENST00000505081 NCAPD2Q15021 1401 aa19.1■□□□□ 0.65
DDX41-205ENST00000505081 LIG1P18858 919 aa19.09■□□□□ 0.65
DDX41-205ENST00000505081 TOB2Q14106 344 aaPredicted RBP19.09■□□□□ 0.65
DDX41-205ENST00000505081 ZNF790Q6PG37 636 aa19.09■□□□□ 0.65
DDX41-205ENST00000505081 PDCL3Q9H2J4 239 aa19.09■□□□□ 0.65
DDX41-205ENST00000505081 GCKRQ14397 625 aa19.08■□□□□ 0.65
DDX41-205ENST00000505081 HDAC5Q9UQL6 1122 aa19.08■□□□□ 0.65
DDX41-205ENST00000505081 GLIPR1L2Q4G1C9 344 aa19.08■□□□□ 0.64
DDX41-205ENST00000505081 LARP1Q6PKG0 1096 aaKnown RBP19.08■□□□□ 0.64
DDX41-205ENST00000505081 SASS6Q6UVJ0 657 aa19.08■□□□□ 0.64
DDX41-205ENST00000505081 CCDC129Q6ZRS4 1044 aa19.08■□□□□ 0.64
DDX41-205ENST00000505081 RPS6KB1P23443 525 aa19.07■□□□□ 0.64
DDX41-205ENST00000505081 COL15A1P39059 1388 aa19.07■□□□□ 0.64
DDX41-205ENST00000505081 HIP1O00291 1037 aa19.07■□□□□ 0.64
DDX41-205ENST00000505081 PSMA5P28066 241 aa19.07■□□□□ 0.64
DDX41-205ENST00000505081 SEC62Q99442 399 aaKnown RBP19.07■□□□□ 0.64
DDX41-205ENST00000505081 MED23Q9ULK4 1368 aa19.07■□□□□ 0.64
DDX41-205ENST00000505081 SPC24Q8NBT2 197 aa19.07■□□□□ 0.64
DDX41-205ENST00000505081 TSC1Q92574 1164 aa19.07■□□□□ 0.64
DDX41-205ENST00000505081 DBNLQ9UJU6 430 aaKnown RBP19.07■□□□□ 0.64
DDX41-205ENST00000505081 USP16Q9Y5T5 823 aa19.07■□□□□ 0.64
DDX41-205ENST00000505081 NEXNQ0ZGT2 675 aa19.06■□□□□ 0.64
DDX41-205ENST00000505081 TFCP2Q12800 502 aa19.06■□□□□ 0.64
DDX41-205ENST00000505081 ZNF496Q96IT1 587 aaPredicted RBP19.06■□□□□ 0.64
DDX41-205ENST00000505081 NLRP2Q9NX02 1062 aa19.06■□□□□ 0.64
DDX41-205ENST00000505081 JAK2O60674 1132 aa19.06■□□□□ 0.64
DDX41-205ENST00000505081 TAF5LO75529 589 aa19.06■□□□□ 0.64
DDX41-205ENST00000505081 NOLC1Q14978 699 aaKnown RBP eCLIP19.06■□□□□ 0.64
DDX41-205ENST00000505081 RGPD5Q99666 1765 aa19.06■□□□□ 0.64
DDX41-205ENST00000505081 PHRF1Q9P1Y6 1649 aaKnown RBP19.05■□□□□ 0.64
DDX41-205ENST00000505081 ATP5J2-PTCD1G3V325 749 aa19.05■□□□□ 0.64
DDX41-205ENST00000505081 PTCD1O75127 700 aaKnown RBP19.05■□□□□ 0.64
DDX41-205ENST00000505081 KRT85P78386 507 aa19.05■□□□□ 0.64
DDX41-205ENST00000505081 KRT28Q7Z3Y7 464 aa19.05■□□□□ 0.64
DDX41-205ENST00000505081 CKAP2LQ8IYA6 745 aa19.05■□□□□ 0.64
DDX41-205ENST00000505081 PIBF1Q8WXW3 757 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms