RNA–Protein interactions for RNA: ENST00000505054.2

SYNE4-207, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 713 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-207ENST00000505054 DDX21Q9NR30 783 aaKnown RBP eCLIP21.76■■□□□ 1.07
SYNE4-207ENST00000505054 SRGNP10124 158 aa21.75■■□□□ 1.07
SYNE4-207ENST00000505054 TWISTNBQ3B726 338 aaPredicted RBP21.75■■□□□ 1.07
SYNE4-207ENST00000505054 PRPF40BQ6NWY9 871 aaKnown RBP21.75■■□□□ 1.07
SYNE4-207ENST00000505054 TTLL7Q6ZT98 887 aa21.75■■□□□ 1.07
SYNE4-207ENST00000505054 E9PSI1 815 aa21.74■■□□□ 1.07
SYNE4-207ENST00000505054 HNRNPUQ00839 825 aaKnown RBP eCLIP21.74■■□□□ 1.07
SYNE4-207ENST00000505054 SLFN5Q08AF3 891 aa21.74■■□□□ 1.07
SYNE4-207ENST00000505054 CDCA7LQ96GN5 454 aa21.74■■□□□ 1.07
SYNE4-207ENST00000505054 MASTLQ96GX5 879 aa21.74■■□□□ 1.07
SYNE4-207ENST00000505054 HSPA1AP0DMV8 641 aaKnown RBP21.73■■□□□ 1.07
SYNE4-207ENST00000505054 HSPA1BP0DMV9 641 aaKnown RBP21.73■■□□□ 1.07
SYNE4-207ENST00000505054 DBF4Q9UBU7 674 aaPredicted RBP21.73■■□□□ 1.07
SYNE4-207ENST00000505054 CLEC4GQ6UXB4 293 aa21.72■■□□□ 1.07
SYNE4-207ENST00000505054 TNS4Q8IZW8 715 aa21.72■■□□□ 1.07
SYNE4-207ENST00000505054 ZNF652Q9Y2D9 606 aa21.72■■□□□ 1.07
SYNE4-207ENST00000505054 CHADLQ6NUI6 762 aa21.71■■□□□ 1.07
SYNE4-207ENST00000505054 NBPF5PQ86XG9 351 aaPredicted RBP21.71■■□□□ 1.07
SYNE4-207ENST00000505054 XAGE3Q8WTP9 111 aa21.71■■□□□ 1.07
SYNE4-207ENST00000505054 MAP3K15Q6ZN16 1313 aa21.71■■□□□ 1.07
SYNE4-207ENST00000505054 RGL2O15211 777 aa21.7■■□□□ 1.06
SYNE4-207ENST00000505054 VAMP4O75379 141 aa21.7■■□□□ 1.06
SYNE4-207ENST00000505054 HLFQ16534 295 aa21.7■■□□□ 1.06
SYNE4-207ENST00000505054 CCDC30Q5VVM6 783 aa21.7■■□□□ 1.06
SYNE4-207ENST00000505054 KIF6Q6ZMV9 814 aa21.7■■□□□ 1.06
SYNE4-207ENST00000505054 DDNO94850 711 aaPredicted RBP21.69■■□□□ 1.06
SYNE4-207ENST00000505054 CCDC93Q567U6 631 aa21.69■■□□□ 1.06
SYNE4-207ENST00000505054 COPS6Q7L5N1 327 aa21.69■■□□□ 1.06
SYNE4-207ENST00000505054 TRMT2AQ8IZ69 625 aaKnown RBP21.69■■□□□ 1.06
SYNE4-207ENST00000505054 ZBTB3Q9H5J0 574 aa21.69■■□□□ 1.06
SYNE4-207ENST00000505054 CREBZFQ9NS37 354 aa21.69■■□□□ 1.06
SYNE4-207ENST00000505054 ERVV-1B6SEH8 477 aa21.68■■□□□ 1.06
SYNE4-207ENST00000505054 TCERG1O14776 1098 aaKnown RBP21.68■■□□□ 1.06
SYNE4-207ENST00000505054 AIMP1Q12904 312 aaKnown RBP21.68■■□□□ 1.06
SYNE4-207ENST00000505054 HYPKQ9NX55 129 aa21.68■■□□□ 1.06
SYNE4-207ENST00000505054 IQCA1LA6NCM1 817 aa21.67■■□□□ 1.06
SYNE4-207ENST00000505054 NPR1P16066 1061 aa21.67■■□□□ 1.06
SYNE4-207ENST00000505054 C7orf43Q8WVR3 580 aa21.67■■□□□ 1.06
SYNE4-207ENST00000505054 L3MBTL3Q96JM7 780 aaPredicted RBP21.67■■□□□ 1.06
SYNE4-207ENST00000505054 CHMP4AQ9BY43 222 aa21.67■■□□□ 1.06
SYNE4-207ENST00000505054 ADAMTSL1Q8N6G6 1762 aa21.66■■□□□ 1.06
SYNE4-207ENST00000505054 KLRG2A4D1S0 409 aaPredicted RBP21.66■■□□□ 1.06
SYNE4-207ENST00000505054 POTEIP0CG38 1075 aa21.66■■□□□ 1.06
SYNE4-207ENST00000505054 POTEJP0CG39 1038 aa21.66■■□□□ 1.06
SYNE4-207ENST00000505054 PHAXQ9H814 394 aaKnown RBP21.66■■□□□ 1.06
SYNE4-207ENST00000505054 NUP98P52948 1817 aa21.65■■□□□ 1.06
SYNE4-207ENST00000505054 FKBP4Q02790 459 aaKnown RBP eCLIP21.65■■□□□ 1.06
SYNE4-207ENST00000505054 ZBED9Q6R2W3 1325 aa21.64■■□□□ 1.05
SYNE4-207ENST00000505054 CAPN15O75808 1086 aa21.64■■□□□ 1.05
SYNE4-207ENST00000505054 TPTE2Q6XPS3 522 aa21.64■■□□□ 1.05
SYNE4-207ENST00000505054 GIGYF2Q6Y7W6 1299 aaKnown RBP21.64■■□□□ 1.05
SYNE4-207ENST00000505054 LDHDQ86WU2 507 aa21.64■■□□□ 1.05
SYNE4-207ENST00000505054 STK31Q9BXU1 1019 aa21.64■■□□□ 1.05
SYNE4-207ENST00000505054 NIP7Q9Y221 180 aaKnown RBP eCLIP21.64■■□□□ 1.05
SYNE4-207ENST00000505054 PASKQ96RG2 1323 aa21.62■■□□□ 1.05
SYNE4-207ENST00000505054 PLBD2Q8NHP8 589 aa21.62■■□□□ 1.05
SYNE4-207ENST00000505054 TAF1DQ9H5J8 278 aaPredicted RBP21.62■■□□□ 1.05
SYNE4-207ENST00000505054 MKRN1Q9UHC7 482 aaKnown RBP21.62■■□□□ 1.05
SYNE4-207ENST00000505054 CNTNAP1P78357 1384 aa21.61■■□□□ 1.05
SYNE4-207ENST00000505054 UBN2Q6ZU65 1347 aa21.61■■□□□ 1.05
SYNE4-207ENST00000505054 ZNF541Q9H0D2 1346 aa21.61■■□□□ 1.05
SYNE4-207ENST00000505054 SLC4A2P04920 1241 aa21.61■■□□□ 1.05
SYNE4-207ENST00000505054 G2E3Q7L622 706 aa21.61■■□□□ 1.05
SYNE4-207ENST00000505054 GPTP24298 496 aa21.6■■□□□ 1.05
SYNE4-207ENST00000505054 ANKRD13DQ6ZTN6 518 aa21.6■■□□□ 1.05
SYNE4-207ENST00000505054 ZNF34Q8IZ26 560 aa21.6■■□□□ 1.05
SYNE4-207ENST00000505054 RTKN2Q8IZC4 609 aa21.6■■□□□ 1.05
SYNE4-207ENST00000505054 ZNF277Q9NRM2 450 aaPredicted RBP21.6■■□□□ 1.05
SYNE4-207ENST00000505054 RIC1Q4ADV7 1423 aa21.59■■□□□ 1.05
SYNE4-207ENST00000505054 SNED1Q8TER0 1413 aa21.59■■□□□ 1.05
SYNE4-207ENST00000505054 FAM177BA6PVY3 158 aa21.58■■□□□ 1.05
SYNE4-207ENST00000505054 ALDH1B1P30837 517 aa21.58■■□□□ 1.05
SYNE4-207ENST00000505054 HACL1Q9UJ83 578 aa21.58■■□□□ 1.05
SYNE4-207ENST00000505054 ABCC12Q96J65 1359 aa21.58■■□□□ 1.04
SYNE4-207ENST00000505054 FLIIQ13045 1269 aa21.57■■□□□ 1.04
SYNE4-207ENST00000505054 TCIRG1Q13488 830 aa21.57■■□□□ 1.04
SYNE4-207ENST00000505054 OLFM4Q6UX06 510 aa21.57■■□□□ 1.04
SYNE4-207ENST00000505054 IBTKQ9P2D0 1353 aaPredicted RBP21.57■■□□□ 1.04
SYNE4-207ENST00000505054 ANKRD36CQ5JPF3 1778 aa21.56■■□□□ 1.04
SYNE4-207ENST00000505054 GTF2E1P29083 439 aaPredicted RBP21.56■■□□□ 1.04
SYNE4-207ENST00000505054 IARSP41252 1262 aaKnown RBP21.56■■□□□ 1.04
SYNE4-207ENST00000505054 EAPPQ56P03 285 aaPredicted RBP21.56■■□□□ 1.04
SYNE4-207ENST00000505054 HSP90AB3PQ58FF7 597 aa21.56■■□□□ 1.04
SYNE4-207ENST00000505054 NYXQ9GZU5 481 aa21.56■■□□□ 1.04
SYNE4-207ENST00000505054 DDX58O95786 925 aaKnown RBP21.55■■□□□ 1.04
SYNE4-207ENST00000505054 CRY2Q49AN0 593 aa21.55■■□□□ 1.04
SYNE4-207ENST00000505054 SUSD4Q5VX71 490 aa21.55■■□□□ 1.04
SYNE4-207ENST00000505054 RIC3Q7Z5B4 369 aa21.55■■□□□ 1.04
SYNE4-207ENST00000505054 TMEM88BA6NKF7 163 aa21.54■■□□□ 1.04
SYNE4-207ENST00000505054 FZD9O00144 591 aa21.54■■□□□ 1.04
SYNE4-207ENST00000505054 NTSR2O95665 410 aa21.54■■□□□ 1.04
SYNE4-207ENST00000505054 EPHX2P34913 555 aa21.54■■□□□ 1.04
SYNE4-207ENST00000505054 PARP10Q53GL7 1025 aa21.54■■□□□ 1.04
SYNE4-207ENST00000505054 NLRP10Q86W26 655 aa21.54■■□□□ 1.04
SYNE4-207ENST00000505054 SSH1Q8WYL5 1049 aa21.54■■□□□ 1.04
SYNE4-207ENST00000505054 PSMD1Q99460 953 aa21.54■■□□□ 1.04
SYNE4-207ENST00000505054 ISCA1Q9BUE6 129 aa21.54■■□□□ 1.04
SYNE4-207ENST00000505054 RNF123Q5XPI4 1314 aa21.54■■□□□ 1.04
SYNE4-207ENST00000505054 PI4KAP2A4QPH2 592 aa21.53■■□□□ 1.04
SYNE4-207ENST00000505054 ITGBL1O95965 494 aaPredicted RBP21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms