RNA–Protein interactions for RNA: ENST00000504878.1

CCNH-203, Transcript of cyclin H, humanhuman

TSL 1 (best) BASIC

Gene CCNH, Length 1,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNH-203ENST00000504878 TCIRG1Q13488 830 aa15.5■□□□□ 0.07
CCNH-203ENST00000504878 HSP90AB3PQ58FF7 597 aa15.5■□□□□ 0.07
CCNH-203ENST00000504878 ANKRD13DQ6ZTN6 518 aa15.5■□□□□ 0.07
CCNH-203ENST00000504878 MASTLQ96GX5 879 aa15.5■□□□□ 0.07
CCNH-203ENST00000504878 NPR1P16066 1061 aa15.49■□□□□ 0.07
CCNH-203ENST00000504878 TWISTNBQ3B726 338 aaPredicted RBP15.49■□□□□ 0.07
CCNH-203ENST00000504878 CRY2Q49AN0 593 aa15.49■□□□□ 0.07
CCNH-203ENST00000504878 CCDC30Q5VVM6 783 aa15.49■□□□□ 0.07
CCNH-203ENST00000504878 PRPF40BQ6NWY9 871 aaKnown RBP15.49■□□□□ 0.07
CCNH-203ENST00000504878 PPP1R42Q7Z4L9 355 aa15.49■□□□□ 0.07
CCNH-203ENST00000504878 NLRP10Q86W26 655 aa15.49■□□□□ 0.07
CCNH-203ENST00000504878 CNKSR1Q969H4 720 aa15.48■□□□□ 0.07
CCNH-203ENST00000504878 DDX60Q8IY21 1712 aaKnown RBP15.48■□□□□ 0.07
CCNH-203ENST00000504878 RASSF7Q02833 373 aa15.47■□□□□ 0.07
CCNH-203ENST00000504878 C3orf67Q6ZVT6 689 aa15.47■□□□□ 0.07
CCNH-203ENST00000504878 ISCA1Q9BUE6 129 aa15.47■□□□□ 0.07
CCNH-203ENST00000504878 UTP14AQ9BVJ6 771 aaKnown RBP15.47■□□□□ 0.07
CCNH-203ENST00000504878 CHMP4AQ9BY43 222 aa15.47■□□□□ 0.07
CCNH-203ENST00000504878 RNF123Q5XPI4 1314 aa15.47■□□□□ 0.07
CCNH-203ENST00000504878 NFKBIEO00221 500 aa15.46■□□□□ 0.07
CCNH-203ENST00000504878 TCERG1O14776 1098 aaKnown RBP15.46■□□□□ 0.07
CCNH-203ENST00000504878 C21orf2O43822 256 aa15.46■□□□□ 0.07
CCNH-203ENST00000504878 PRELPP51888 382 aa15.46■□□□□ 0.07
CCNH-203ENST00000504878 C7orf43Q8WVR3 580 aa15.46■□□□□ 0.07
CCNH-203ENST00000504878 DICER1Q9UPY3 1922 aaKnown RBP15.46■□□□□ 0.07
CCNH-203ENST00000504878 EXOSC9Q06265 439 aaKnown RBP15.46■□□□□ 0.06
CCNH-203ENST00000504878 GOLGA2Q08379 1002 aa15.46■□□□□ 0.06
CCNH-203ENST00000504878 SLC10A5Q5PT55 438 aa15.46■□□□□ 0.06
CCNH-203ENST00000504878 C9orf131Q5VYM1 1079 aa15.46■□□□□ 0.06
CCNH-203ENST00000504878 DIEXFQ68CQ4 756 aaKnown RBP15.46■□□□□ 0.06
CCNH-203ENST00000504878 SYNE4Q8N205 404 aa15.46■□□□□ 0.06
CCNH-203ENST00000504878 RNF216Q9NWF9 866 aaPredicted RBP15.46■□□□□ 0.06
CCNH-203ENST00000504878 ZNF219Q9P2Y4 722 aaPredicted RBP15.46■□□□□ 0.06
CCNH-203ENST00000504878 TIAM2Q8IVF5 1701 aa15.46■□□□□ 0.06
CCNH-203ENST00000504878 ATP5J2-PTCD1G3V325 749 aa15.45■□□□□ 0.06
CCNH-203ENST00000504878 VAMP4O75379 141 aa15.45■□□□□ 0.06
CCNH-203ENST00000504878 HOXA10P31260 410 aaPredicted RBP15.45■□□□□ 0.06
CCNH-203ENST00000504878 RIC3Q7Z5B4 369 aa15.45■□□□□ 0.06
CCNH-203ENST00000504878 ZNF428Q96B54 188 aa15.45■□□□□ 0.06
CCNH-203ENST00000504878 STK31Q9BXU1 1019 aa15.45■□□□□ 0.06
CCNH-203ENST00000504878 MYH16Q9H6N6 1097 aa15.45■□□□□ 0.06
CCNH-203ENST00000504878 TRIM28Q13263 835 aaKnown RBP15.44■□□□□ 0.06
CCNH-203ENST00000504878 G2E3Q7L622 706 aa15.44■□□□□ 0.06
CCNH-203ENST00000504878 RNF181Q9P0P0 153 aa15.44■□□□□ 0.06
CCNH-203ENST00000504878 TRMT112Q9UI30 125 aaKnown RBP15.44■□□□□ 0.06
CCNH-203ENST00000504878 TAF1P21675 1872 aa15.44■□□□□ 0.06
CCNH-203ENST00000504878 HCLS1P14317 486 aaPredicted RBP15.43■□□□□ 0.06
CCNH-203ENST00000504878 MIER1Q8N108 512 aa15.43■□□□□ 0.06
CCNH-203ENST00000504878 SH3TC1Q8TE82 1336 aa15.43■□□□□ 0.06
CCNH-203ENST00000504878 SNED1Q8TER0 1413 aa15.43■□□□□ 0.06
CCNH-203ENST00000504878 LTBP3Q9NS15 1303 aa15.42■□□□□ 0.06
CCNH-203ENST00000504878 SLC4A2P04920 1241 aa15.42■□□□□ 0.06
CCNH-203ENST00000504878 LMNB1P20700 586 aa15.42■□□□□ 0.06
CCNH-203ENST00000504878 ALDH1B1P30837 517 aa15.42■□□□□ 0.06
CCNH-203ENST00000504878 OLFM4Q6UX06 510 aa15.42■□□□□ 0.06
CCNH-203ENST00000504878 RPGRQ92834 1020 aaKnown RBP15.42■□□□□ 0.06
CCNH-203ENST00000504878 NLRP3Q96P20 1036 aa15.42■□□□□ 0.06
CCNH-203ENST00000504878 PI4KAP2A4QPH2 592 aa15.41■□□□□ 0.06
CCNH-203ENST00000504878 DDX58O95786 925 aaKnown RBP15.41■□□□□ 0.06
CCNH-203ENST00000504878 SOGA3Q5TF21 947 aa15.41■□□□□ 0.06
CCNH-203ENST00000504878 PI4KAP1Q8N8J0 262 aa15.41■□□□□ 0.06
CCNH-203ENST00000504878 ZNF526Q8TF50 670 aaPredicted RBP15.41■□□□□ 0.06
CCNH-203ENST00000504878 FAM89AQ96GI7 184 aa15.41■□□□□ 0.06
CCNH-203ENST00000504878 MYD88Q99836 296 aa15.41■□□□□ 0.06
CCNH-203ENST00000504878 METTL22Q9BUU2 404 aaPredicted RBP15.41■□□□□ 0.06
CCNH-203ENST00000504878 MAP3K2Q9Y2U5 619 aa15.41■□□□□ 0.06
CCNH-203ENST00000504878 FLIIQ13045 1269 aa15.4■□□□□ 0.06
CCNH-203ENST00000504878 KSR2Q6VAB6 950 aa15.4■□□□□ 0.06
CCNH-203ENST00000504878 SLC51AQ86UW1 340 aa15.4■□□□□ 0.06
CCNH-203ENST00000504878 CNKSR2Q8WXI2 1034 aa15.4■□□□□ 0.06
CCNH-203ENST00000504878 CRAMP1Q96RY5 1269 aa15.4■□□□□ 0.06
CCNH-203ENST00000504878 GPBP1L1Q9HC44 474 aaPredicted RBP15.4■□□□□ 0.06
CCNH-203ENST00000504878 CCDC93Q567U6 631 aa15.4■□□□□ 0.06
CCNH-203ENST00000504878 RBM17Q96I25 401 aaKnown RBP15.4■□□□□ 0.06
CCNH-203ENST00000504878 TAOK3Q9H2K8 898 aa15.4■□□□□ 0.06
CCNH-203ENST00000504878 ABCC4O15439 1325 aa15.39■□□□□ 0.05
CCNH-203ENST00000504878 ZC3H4Q9UPT8 1303 aaKnown RBP15.39■□□□□ 0.05
CCNH-203ENST00000504878 CEP350Q5VT06 3117 aa15.39■□□□□ 0.05
CCNH-203ENST00000504878 CCDC191Q8NCU4 936 aa15.39■□□□□ 0.05
CCNH-203ENST00000504878 COL4A1P02462 1669 aa15.38■□□□□ 0.05
CCNH-203ENST00000504878 E9PSI1 815 aa15.38■□□□□ 0.05
CCNH-203ENST00000504878 IGKV5-2P06315 115 aa15.38■□□□□ 0.05
CCNH-203ENST00000504878 SLFN5Q08AF3 891 aa15.38■□□□□ 0.05
CCNH-203ENST00000504878 RTL5Q5HYW3 569 aaPredicted RBP15.38■□□□□ 0.05
CCNH-203ENST00000504878 ZBTB38Q8NAP3 1195 aaPredicted RBP15.38■□□□□ 0.05
CCNH-203ENST00000504878 MYH3P11055 1940 aa15.37■□□□□ 0.05
CCNH-203ENST00000504878 LRRC37AA6NMS7 1700 aa15.37■□□□□ 0.05
CCNH-203ENST00000504878 CDCA7LQ96GN5 454 aa15.37■□□□□ 0.05
CCNH-203ENST00000504878 CWC25Q9NXE8 425 aaPredicted RBP15.37■□□□□ 0.05
CCNH-203ENST00000504878 IRS4O14654 1257 aaPredicted RBP15.36■□□□□ 0.05
CCNH-203ENST00000504878 PPEF1O14829 653 aaPredicted RBP15.36■□□□□ 0.05
CCNH-203ENST00000504878 PCCAP05165 728 aaPredicted RBP15.36■□□□□ 0.05
CCNH-203ENST00000504878 FKBP4Q02790 459 aaKnown RBP eCLIP15.36■□□□□ 0.05
CCNH-203ENST00000504878 FKBP5Q13451 457 aaPredicted RBP15.36■□□□□ 0.05
CCNH-203ENST00000504878 RTKN2Q8IZC4 609 aa15.36■□□□□ 0.05
CCNH-203ENST00000504878 SF3B3Q15393 1217 aaKnown RBP15.35■□□□□ 0.05
CCNH-203ENST00000504878 CWF19L2Q2TBE0 894 aaKnown RBP15.35■□□□□ 0.05
CCNH-203ENST00000504878 CC2D2BQ6DHV5 1058 aa15.35■□□□□ 0.05
CCNH-203ENST00000504878 TRMT2AQ8IZ69 625 aaKnown RBP15.35■□□□□ 0.05
CCNH-203ENST00000504878 NMRK2Q9NPI5 230 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms