RNA–Protein interactions for RNA: ENST00000504872.5

APBB3-209, Transcript of amyloid beta precursor protein binding family B member 3, human

TSL 4

Gene APBB3, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APBB3-209	ENST00000504872	SERPINB2	P05120	415 aa		13.8	□□□□□ -0.2
APBB3-209	ENST00000504872	HNRNPU	Q00839	825 aa	Known RBP eCLIP	13.8	□□□□□ -0.2
APBB3-209	ENST00000504872	ANKRD13D	Q6ZTN6	518 aa		13.8	□□□□□ -0.2
APBB3-209	ENST00000504872	NPM2	Q86SE8	214 aa	Known RBP	13.8	□□□□□ -0.2
APBB3-209	ENST00000504872	ARFGEF1	Q9Y6D6	1849 aa		13.8	□□□□□ -0.2
APBB3-209	ENST00000504872	PLBD2	Q8NHP8	589 aa		13.79	□□□□□ -0.2
APBB3-209	ENST00000504872	TSKS	Q9UJT2	592 aa		13.79	□□□□□ -0.2
APBB3-209	ENST00000504872	PARP3	Q9Y6F1	533 aa		13.79	□□□□□ -0.2
APBB3-209	ENST00000504872	SLC4A2	P04920	1241 aa		13.78	□□□□□ -0.2
APBB3-209	ENST00000504872	RASSF7	Q02833	373 aa		13.78	□□□□□ -0.2
APBB3-209	ENST00000504872	TRIM28	Q13263	835 aa	Known RBP	13.78	□□□□□ -0.2
APBB3-209	ENST00000504872	TCIRG1	Q13488	830 aa		13.78	□□□□□ -0.2
APBB3-209	ENST00000504872	G2E3	Q7L622	706 aa		13.78	□□□□□ -0.2
APBB3-209	ENST00000504872	ZNF428	Q96B54	188 aa		13.78	□□□□□ -0.2
APBB3-209	ENST00000504872	ZBED9	Q6R2W3	1325 aa		13.78	□□□□□ -0.2
APBB3-209	ENST00000504872	PASK	Q96RG2	1323 aa		13.78	□□□□□ -0.2
APBB3-209	ENST00000504872	CT47B1	P0C2W7	299 aa	Predicted RBP	13.77	□□□□□ -0.21
APBB3-209	ENST00000504872	SOX10	P56693	466 aa		13.77	□□□□□ -0.21
APBB3-209	ENST00000504872	AIMP1	Q12904	312 aa	Known RBP	13.77	□□□□□ -0.21
APBB3-209	ENST00000504872	SETDB2	Q96T68	719 aa		13.77	□□□□□ -0.21
APBB3-209	ENST00000504872	ZBTB3	Q9H5J0	574 aa		13.77	□□□□□ -0.21
APBB3-209	ENST00000504872	ZNF652	Q9Y2D9	606 aa		13.77	□□□□□ -0.21
APBB3-209	ENST00000504872	KLRG2	A4D1S0	409 aa	Predicted RBP	13.76	□□□□□ -0.21
APBB3-209	ENST00000504872	DLL1	O00548	723 aa		13.76	□□□□□ -0.21
APBB3-209	ENST00000504872	KIF6	Q6ZMV9	814 aa		13.76	□□□□□ -0.21
APBB3-209	ENST00000504872	BICDL1	Q6ZP65	573 aa		13.76	□□□□□ -0.21
APBB3-209	ENST00000504872	ISCA1	Q9BUE6	129 aa		13.76	□□□□□ -0.21
APBB3-209	ENST00000504872	NRXN2	Q9P2S2	1712 aa		13.76	□□□□□ -0.21
APBB3-209	ENST00000504872	UBN2	Q6ZU65	1347 aa		13.75	□□□□□ -0.21
APBB3-209	ENST00000504872	TCERG1	O14776	1098 aa	Known RBP	13.75	□□□□□ -0.21
APBB3-209	ENST00000504872	BRPF1	P55201	1214 aa	Predicted RBP	13.75	□□□□□ -0.21
APBB3-209	ENST00000504872	PRR5L	Q6MZQ0	368 aa		13.75	□□□□□ -0.21
APBB3-209	ENST00000504872	CHADL	Q6NUI6	762 aa		13.75	□□□□□ -0.21
APBB3-209	ENST00000504872	STK31	Q9BXU1	1019 aa		13.75	□□□□□ -0.21
APBB3-209	ENST00000504872	NIP7	Q9Y221	180 aa	Known RBP eCLIP	13.75	□□□□□ -0.21
APBB3-209	ENST00000504872	BCOR	Q6W2J9	1755 aa		13.75	□□□□□ -0.21
APBB3-209	ENST00000504872	SCN7A	Q01118	1682 aa		13.75	□□□□□ -0.21
APBB3-209	ENST00000504872	CARMIL3	Q8ND23	1372 aa		13.74	□□□□□ -0.21
APBB3-209	ENST00000504872	ALDH1L2	Q3SY69	923 aa		13.74	□□□□□ -0.21
APBB3-209	ENST00000504872	SUSD4	Q5VX71	490 aa		13.74	□□□□□ -0.21
APBB3-209	ENST00000504872	KSR2	Q6VAB6	950 aa		13.74	□□□□□ -0.21
APBB3-209	ENST00000504872	TPTE2	Q6XPS3	522 aa		13.74	□□□□□ -0.21
APBB3-209	ENST00000504872	MRPL50	Q8N5N7	158 aa	Known RBP	13.74	□□□□□ -0.21
APBB3-209	ENST00000504872	NUP98	P52948	1817 aa		13.74	□□□□□ -0.21
APBB3-209	ENST00000504872	PI4KAP2	A4QPH2	592 aa		13.73	□□□□□ -0.21
APBB3-209	ENST00000504872	FLII	Q13045	1269 aa		13.73	□□□□□ -0.21
APBB3-209	ENST00000504872	PARP10	Q53GL7	1025 aa		13.73	□□□□□ -0.21
APBB3-209	ENST00000504872	HSP90AB3P	Q58FF7	597 aa		13.73	□□□□□ -0.21
APBB3-209	ENST00000504872	HABP4	Q5JVS0	413 aa	Known RBP	13.73	□□□□□ -0.21
APBB3-209	ENST00000504872	SLC10A5	Q5PT55	438 aa		13.73	□□□□□ -0.21
APBB3-209	ENST00000504872	NLRP10	Q86W26	655 aa		13.73	□□□□□ -0.21
APBB3-209	ENST00000504872	PI4KAP1	Q8N8J0	262 aa		13.73	□□□□□ -0.21
APBB3-209	ENST00000504872	SSH1	Q8WYL5	1049 aa		13.73	□□□□□ -0.21
APBB3-209	ENST00000504872	METTL22	Q9BUU2	404 aa	Predicted RBP	13.73	□□□□□ -0.21
APBB3-209	ENST00000504872	BRIP1	Q9BX63	1249 aa		13.73	□□□□□ -0.21
APBB3-209	ENST00000504872	NTSR2	O95665	410 aa		13.72	□□□□□ -0.21
APBB3-209	ENST00000504872	IBTK	Q9P2D0	1353 aa	Predicted RBP	13.71	□□□□□ -0.21
APBB3-209	ENST00000504872	LTBP1	Q14766	1721 aa		13.71	□□□□□ -0.21
APBB3-209	ENST00000504872	DDX58	O95786	925 aa	Known RBP	13.71	□□□□□ -0.21
APBB3-209	ENST00000504872	IGKV5-2	P06315	115 aa		13.71	□□□□□ -0.21
APBB3-209	ENST00000504872	GPT	P24298	496 aa		13.71	□□□□□ -0.21
APBB3-209	ENST00000504872	RARS	P54136	660 aa	Known RBP	13.71	□□□□□ -0.21
APBB3-209	ENST00000504872	RIC3	Q7Z5B4	369 aa		13.71	□□□□□ -0.21
APBB3-209	ENST00000504872	AFDN	P55196	1824 aa	Known RBP	13.71	□□□□□ -0.22
APBB3-209	ENST00000504872	CACNA1F	O60840	1977 aa		13.71	□□□□□ -0.22
APBB3-209	ENST00000504872	WDR33	Q9C0J8	1336 aa	Known RBP	13.7	□□□□□ -0.22
APBB3-209	ENST00000504872	ZC3H4	Q9UPT8	1303 aa	Known RBP	13.7	□□□□□ -0.22
APBB3-209	ENST00000504872	RASSF10	A6NK89	507 aa		13.7	□□□□□ -0.22
APBB3-209	ENST00000504872	MAP2K1	Q02750	393 aa	Predicted RBP	13.7	□□□□□ -0.22
APBB3-209	ENST00000504872	PPP1R42	Q7Z4L9	355 aa		13.7	□□□□□ -0.22
APBB3-209	ENST00000504872	NBPF5P	Q86XG9	351 aa	Predicted RBP	13.7	□□□□□ -0.22
APBB3-209	ENST00000504872	NYX	Q9GZU5	481 aa		13.7	□□□□□ -0.22
APBB3-209	ENST00000504872	MAP3K2	Q9Y2U5	619 aa		13.7	□□□□□ -0.22
APBB3-209	ENST00000504872	CASP8AP2	Q9UKL3	1982 aa		13.7	□□□□□ -0.22
APBB3-209	ENST00000504872	TMEM88B	A6NKF7	163 aa		13.69	□□□□□ -0.22
APBB3-209	ENST00000504872	ATP5J2-PTCD1	G3V325	749 aa		13.69	□□□□□ -0.22
APBB3-209	ENST00000504872	ITGBL1	O95965	494 aa	Predicted RBP	13.69	□□□□□ -0.22
APBB3-209	ENST00000504872	SYNE4	Q8N205	404 aa		13.69	□□□□□ -0.22
APBB3-209	ENST00000504872	CCDC24	Q8N4L8	307 aa		13.69	□□□□□ -0.22
APBB3-209	ENST00000504872	CNBD1	Q8NA66	436 aa		13.69	□□□□□ -0.22
APBB3-209	ENST00000504872	CCDC191	Q8NCU4	936 aa		13.69	□□□□□ -0.22
APBB3-209	ENST00000504872	PDZRN3	Q9UPQ7	1066 aa		13.69	□□□□□ -0.22
APBB3-209	ENST00000504872	CUL9	Q8IWT3	2517 aa		13.69	□□□□□ -0.22
APBB3-209	ENST00000504872	THSD7B	Q9C0I4	1608 aa		13.68	□□□□□ -0.22
APBB3-209	ENST00000504872	RNF123	Q5XPI4	1314 aa		13.68	□□□□□ -0.22
APBB3-209	ENST00000504872	TIAM2	Q8IVF5	1701 aa		13.68	□□□□□ -0.22
APBB3-209	ENST00000504872	RIC1	Q4ADV7	1423 aa		13.68	□□□□□ -0.22
APBB3-209	ENST00000504872	PDE6B	P35913	854 aa		13.68	□□□□□ -0.22
APBB3-209	ENST00000504872	FXR1	P51114	621 aa	Known RBP eCLIP	13.68	□□□□□ -0.22
APBB3-209	ENST00000504872	CRY2	Q49AN0	593 aa		13.68	□□□□□ -0.22
APBB3-209	ENST00000504872	ERFE	Q4G0M1	354 aa		13.68	□□□□□ -0.22
APBB3-209	ENST00000504872	DALRD3	Q5D0E6	543 aa	Known RBP	13.68	□□□□□ -0.22
APBB3-209	ENST00000504872	DNAAF4	Q8WXU2	420 aa		13.68	□□□□□ -0.22
APBB3-209	ENST00000504872	UTP14A	Q9BVJ6	771 aa	Known RBP	13.68	□□□□□ -0.22
APBB3-209	ENST00000504872	PIM2	Q9P1W9	311 aa		13.68	□□□□□ -0.22
APBB3-209	ENST00000504872	SRGN	P10124	158 aa		13.67	□□□□□ -0.22
APBB3-209	ENST00000504872	CHRNA5	P30532	468 aa		13.67	□□□□□ -0.22
APBB3-209	ENST00000504872	FKBP5	Q13451	457 aa	Predicted RBP	13.67	□□□□□ -0.22
APBB3-209	ENST00000504872	DGKZ	Q13574	1117 aa		13.67	□□□□□ -0.22
APBB3-209	ENST00000504872	BEND3	Q5T5X7	828 aa		13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms