RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 PHACTR3Q96KR7 559 aa9.24□□□□□ -0.93
NPIPB3-203ENST00000504841 ABCC12Q96J65 1359 aa9.24□□□□□ -0.93
NPIPB3-203ENST00000504841 CCDC85CA6NKD9 419 aa9.23□□□□□ -0.93
NPIPB3-203ENST00000504841 NBPF26B4DH59 902 aa9.23□□□□□ -0.93
NPIPB3-203ENST00000504841 FZD9O00144 591 aa9.23□□□□□ -0.93
NPIPB3-203ENST00000504841 TCERG1O14776 1098 aaKnown RBP9.23□□□□□ -0.93
NPIPB3-203ENST00000504841 SNRPA1P09661 255 aaKnown RBP9.23□□□□□ -0.93
NPIPB3-203ENST00000504841 EIF6P56537 245 aaKnown RBP9.23□□□□□ -0.93
NPIPB3-203ENST00000504841 HLFQ16534 295 aa9.23□□□□□ -0.93
NPIPB3-203ENST00000504841 NBPF10Q6P3W6 841 aaKnown RBP9.23□□□□□ -0.93
NPIPB3-203ENST00000504841 NUTM1Q86Y26 1132 aa9.23□□□□□ -0.93
NPIPB3-203ENST00000504841 GPC2Q8N158 579 aa9.23□□□□□ -0.93
NPIPB3-203ENST00000504841 NBPF15Q8N660 670 aa9.23□□□□□ -0.93
NPIPB3-203ENST00000504841 RTF1Q92541 710 aaKnown RBP9.23□□□□□ -0.93
NPIPB3-203ENST00000504841 CAPNS2Q96L46 248 aa9.23□□□□□ -0.93
NPIPB3-203ENST00000504841 DDX21Q9NR30 783 aaKnown RBP eCLIP9.23□□□□□ -0.93
NPIPB3-203ENST00000504841 TSKSQ9UJT2 592 aa9.23□□□□□ -0.93
NPIPB3-203ENST00000504841 TRAF5O00463 557 aa9.22□□□□□ -0.93
NPIPB3-203ENST00000504841 SLC34A2O95436 690 aa9.22□□□□□ -0.93
NPIPB3-203ENST00000504841 ALDH1B1P30837 517 aa9.22□□□□□ -0.93
NPIPB3-203ENST00000504841 DCTN1Q14203 1278 aa9.22□□□□□ -0.93
NPIPB3-203ENST00000504841 CYP4F22Q6NT55 531 aa9.22□□□□□ -0.93
NPIPB3-203ENST00000504841 SLC51AQ86UW1 340 aa9.22□□□□□ -0.93
NPIPB3-203ENST00000504841 LARGE2Q8N3Y3 721 aa9.22□□□□□ -0.93
NPIPB3-203ENST00000504841 RPGRQ92834 1020 aaKnown RBP9.22□□□□□ -0.93
NPIPB3-203ENST00000504841 CFAP44Q96MT7 982 aa9.22□□□□□ -0.93
NPIPB3-203ENST00000504841 BEGAINQ9BUH8 593 aa9.22□□□□□ -0.93
NPIPB3-203ENST00000504841 COL4A5P29400 1685 aa9.22□□□□□ -0.93
NPIPB3-203ENST00000504841 LTBP1Q14766 1721 aa9.22□□□□□ -0.93
NPIPB3-203ENST00000504841 KLRG2A4D1S0 409 aaPredicted RBP9.21□□□□□ -0.94
NPIPB3-203ENST00000504841 PER1O15534 1290 aaPredicted RBP9.21□□□□□ -0.94
NPIPB3-203ENST00000504841 GPTP24298 496 aa9.21□□□□□ -0.94
NPIPB3-203ENST00000504841 EPS15P42566 896 aa9.21□□□□□ -0.94
NPIPB3-203ENST00000504841 ECE1P42892 770 aa9.21□□□□□ -0.94
NPIPB3-203ENST00000504841 CCER1Q8TC90 406 aaPredicted RBP9.21□□□□□ -0.94
NPIPB3-203ENST00000504841 CFAP53Q96M91 514 aa9.21□□□□□ -0.94
NPIPB3-203ENST00000504841 RSPH6AQ9H0K4 717 aa9.21□□□□□ -0.94
NPIPB3-203ENST00000504841 PCNTO95613 3336 aa9.2□□□□□ -0.94
NPIPB3-203ENST00000504841 U2AF1L5P0DN76 240 aaPredicted RBP9.2□□□□□ -0.94
NPIPB3-203ENST00000504841 SCNN1DP51172 638 aa9.2□□□□□ -0.94
NPIPB3-203ENST00000504841 U2AF1Q01081 240 aaKnown RBP eCLIP9.2□□□□□ -0.94
NPIPB3-203ENST00000504841 MKRN4PQ13434 485 aaPredicted RBP9.2□□□□□ -0.94
NPIPB3-203ENST00000504841 NIM1KQ8IY84 436 aa9.2□□□□□ -0.94
NPIPB3-203ENST00000504841 GPR101Q96P66 508 aaPredicted RBP9.2□□□□□ -0.94
NPIPB3-203ENST00000504841 PSMD1Q99460 953 aa9.2□□□□□ -0.94
NPIPB3-203ENST00000504841 SNED1Q8TER0 1413 aa9.2□□□□□ -0.94
NPIPB3-203ENST00000504841 THSD7BQ9C0I4 1608 aa9.2□□□□□ -0.94
NPIPB3-203ENST00000504841 PPEF1O14829 653 aaPredicted RBP9.19□□□□□ -0.94
NPIPB3-203ENST00000504841 PPIP5K2O43314 1243 aa9.19□□□□□ -0.94
NPIPB3-203ENST00000504841 AOC2O75106 756 aa9.19□□□□□ -0.94
NPIPB3-203ENST00000504841 MLLT1Q03111 559 aaPredicted RBP9.19□□□□□ -0.94
NPIPB3-203ENST00000504841 CRY2Q49AN0 593 aa9.19□□□□□ -0.94
NPIPB3-203ENST00000504841 NYXQ9GZU5 481 aa9.19□□□□□ -0.94
NPIPB3-203ENST00000504841 ZBTB3Q9H5J0 574 aa9.19□□□□□ -0.94
NPIPB3-203ENST00000504841 MIS18AQ9NYP9 233 aa9.19□□□□□ -0.94
NPIPB3-203ENST00000504841 NUDCQ9Y266 331 aa9.19□□□□□ -0.94
NPIPB3-203ENST00000504841 LAMB4A4D0S4 1761 aa9.19□□□□□ -0.94
NPIPB3-203ENST00000504841 MYL6BP14649 208 aa9.18□□□□□ -0.94
NPIPB3-203ENST00000504841 AOC3Q16853 763 aa9.18□□□□□ -0.94
NPIPB3-203ENST00000504841 CC2D2BQ6DHV5 1058 aa9.18□□□□□ -0.94
NPIPB3-203ENST00000504841 KIF6Q6ZMV9 814 aa9.18□□□□□ -0.94
NPIPB3-203ENST00000504841 ZNF408Q9H9D4 720 aa9.18□□□□□ -0.94
NPIPB3-203ENST00000504841 RRP7AQ9Y3A4 280 aaKnown RBP9.18□□□□□ -0.94
NPIPB3-203ENST00000504841 NPC1L1Q9UHC9 1359 aa9.17□□□□□ -0.94
NPIPB3-203ENST00000504841 MAP3K15Q6ZN16 1313 aa9.17□□□□□ -0.94
NPIPB3-203ENST00000504841 UBN2Q6ZU65 1347 aa9.17□□□□□ -0.94
NPIPB3-203ENST00000504841 RGL2O15211 777 aa9.17□□□□□ -0.94
NPIPB3-203ENST00000504841 CELF2O95319 508 aaKnown RBP9.17□□□□□ -0.94
NPIPB3-203ENST00000504841 SUSD4Q5VX71 490 aa9.17□□□□□ -0.94
NPIPB3-203ENST00000504841 CST9Q5W186 159 aa9.17□□□□□ -0.94
NPIPB3-203ENST00000504841 TTLL7Q6ZT98 887 aa9.17□□□□□ -0.94
NPIPB3-203ENST00000504841 USP50Q70EL3 339 aaPredicted RBP9.17□□□□□ -0.94
NPIPB3-203ENST00000504841 RBM17Q96I25 401 aaKnown RBP9.17□□□□□ -0.94
NPIPB3-203ENST00000504841 GLIS2Q9BZE0 524 aaPredicted RBP9.17□□□□□ -0.94
NPIPB3-203ENST00000504841 TLL2Q9Y6L7 1015 aa9.17□□□□□ -0.94
NPIPB3-203ENST00000504841 TRPM7Q96QT4 1865 aa9.17□□□□□ -0.94
NPIPB3-203ENST00000504841 RIC1Q4ADV7 1423 aa9.16□□□□□ -0.94
NPIPB3-203ENST00000504841 TAF7Q15545 349 aaPredicted RBP9.16□□□□□ -0.94
NPIPB3-203ENST00000504841 C3orf67Q6ZVT6 689 aa9.16□□□□□ -0.94
NPIPB3-203ENST00000504841 TMX4Q9H1E5 349 aaPredicted RBP9.16□□□□□ -0.94
NPIPB3-203ENST00000504841 ADARB2Q9NS39 739 aaKnown RBP9.16□□□□□ -0.94
NPIPB3-203ENST00000504841 GPRC5DQ9NZD1 345 aa9.16□□□□□ -0.94
NPIPB3-203ENST00000504841 NUP98P52948 1817 aa9.15□□□□□ -0.94
NPIPB3-203ENST00000504841 ERVV-1B6SEH8 477 aa9.15□□□□□ -0.94
NPIPB3-203ENST00000504841 HOXA10P31260 410 aaPredicted RBP9.15□□□□□ -0.94
NPIPB3-203ENST00000504841 GMPSP49915 693 aaPredicted RBP9.15□□□□□ -0.94
NPIPB3-203ENST00000504841 CRAMP1Q96RY5 1269 aa9.15□□□□□ -0.94
NPIPB3-203ENST00000504841 THUMPD2Q9BTF0 503 aaKnown RBP9.15□□□□□ -0.94
NPIPB3-203ENST00000504841 BCL2L13Q9BXK5 485 aa9.15□□□□□ -0.94
NPIPB3-203ENST00000504841 MCOLN1Q9GZU1 580 aa9.15□□□□□ -0.94
NPIPB3-203ENST00000504841 IBTKQ9P2D0 1353 aaPredicted RBP9.14□□□□□ -0.95
NPIPB3-203ENST00000504841 RAD17O75943 681 aa9.14□□□□□ -0.95
NPIPB3-203ENST00000504841 NTSR2O95665 410 aa9.14□□□□□ -0.95
NPIPB3-203ENST00000504841 NEFMP07197 916 aa9.14□□□□□ -0.95
NPIPB3-203ENST00000504841 MAP2K2P36507 400 aa9.14□□□□□ -0.95
NPIPB3-203ENST00000504841 CXCL9Q07325 125 aa9.14□□□□□ -0.95
NPIPB3-203ENST00000504841 DGKZQ13574 1117 aa9.14□□□□□ -0.95
NPIPB3-203ENST00000504841 GRIPAP1Q4V328 841 aa9.14□□□□□ -0.95
NPIPB3-203ENST00000504841 CIAPIN1Q6FI81 312 aa9.14□□□□□ -0.95
NPIPB3-203ENST00000504841 SAPCD2Q86UD0 394 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms