RNA–Protein interactions for RNA: ENST00000504835.1

CDH6-202, Transcript of cadherin 6, humanhuman

TSL 5

Gene CDH6, Length 1,568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6-202ENST00000504835 C9orf131Q5VYM1 1079 aa11.61□□□□□ -0.55
CDH6-202ENST00000504835 THSD4Q6ZMP0 1018 aa11.61□□□□□ -0.55
CDH6-202ENST00000504835 DNAJC10Q8IXB1 793 aa11.61□□□□□ -0.55
CDH6-202ENST00000504835 COL11A2P13942 1736 aaPredicted RBP11.61□□□□□ -0.55
CDH6-202ENST00000504835 SCN7AQ01118 1682 aa11.6□□□□□ -0.55
CDH6-202ENST00000504835 TOMM70O94826 608 aa11.6□□□□□ -0.55
CDH6-202ENST00000504835 CHRNA5P30532 468 aa11.6□□□□□ -0.55
CDH6-202ENST00000504835 AKAP4Q5JQC9 854 aa11.6□□□□□ -0.55
CDH6-202ENST00000504835 DNAJC5GQ8N7S2 189 aa11.6□□□□□ -0.55
CDH6-202ENST00000504835 OXER1Q8TDS5 423 aa11.6□□□□□ -0.55
CDH6-202ENST00000504835 SOS1Q07889 1333 aaPredicted RBP11.6□□□□□ -0.55
CDH6-202ENST00000504835 PTPREP23469 700 aa11.59□□□□□ -0.55
CDH6-202ENST00000504835 SLC39A6Q13433 755 aa11.59□□□□□ -0.55
CDH6-202ENST00000504835 USPL1Q5W0Q7 1092 aa11.59□□□□□ -0.55
CDH6-202ENST00000504835 SLC52A2Q9HAB3 445 aa11.59□□□□□ -0.55
CDH6-202ENST00000504835 PIM2Q9P1W9 311 aa11.59□□□□□ -0.55
CDH6-202ENST00000504835 FER1L6Q2WGJ9 1857 aa11.59□□□□□ -0.55
CDH6-202ENST00000504835 RNMTO43148 476 aaKnown RBP11.58□□□□□ -0.55
CDH6-202ENST00000504835 CYP19A1P11511 503 aaPredicted RBP11.58□□□□□ -0.55
CDH6-202ENST00000504835 APLP1P51693 650 aa11.58□□□□□ -0.55
CDH6-202ENST00000504835 COL3A1P02461 1466 aaPredicted RBP11.58□□□□□ -0.56
CDH6-202ENST00000504835 BCORQ6W2J9 1755 aa11.58□□□□□ -0.56
CDH6-202ENST00000504835 HMOX1P09601 288 aa11.58□□□□□ -0.56
CDH6-202ENST00000504835 DALRD3Q5D0E6 543 aaKnown RBP11.58□□□□□ -0.56
CDH6-202ENST00000504835 MRPL50Q8N5N7 158 aaKnown RBP11.58□□□□□ -0.56
CDH6-202ENST00000504835 WNT2BQ93097 391 aa11.58□□□□□ -0.56
CDH6-202ENST00000504835 KNSTRNQ9Y448 316 aa11.58□□□□□ -0.56
CDH6-202ENST00000504835 COL15A1P39059 1388 aa11.58□□□□□ -0.56
CDH6-202ENST00000504835 PRELPP51888 382 aa11.57□□□□□ -0.56
CDH6-202ENST00000504835 MTHFSDQ2M296 383 aaKnown RBP11.57□□□□□ -0.56
CDH6-202ENST00000504835 ZBTB1Q9Y2K1 713 aa11.57□□□□□ -0.56
CDH6-202ENST00000504835 KIF7Q2M1P5 1343 aa11.57□□□□□ -0.56
CDH6-202ENST00000504835 CARMIL3Q8ND23 1372 aa11.57□□□□□ -0.56
CDH6-202ENST00000504835 ARFGEF2Q9Y6D5 1785 aa11.57□□□□□ -0.56
CDH6-202ENST00000504835 BHMG1C9JSJ3 638 aaPredicted RBP11.56□□□□□ -0.56
CDH6-202ENST00000504835 HTRA3P83110 453 aa11.56□□□□□ -0.56
CDH6-202ENST00000504835 NFIXQ14938 502 aa11.56□□□□□ -0.56
CDH6-202ENST00000504835 HS6ST3Q8IZP7 471 aa11.56□□□□□ -0.56
CDH6-202ENST00000504835 RBM46Q8TBY0 533 aaKnown RBP11.56□□□□□ -0.56
CDH6-202ENST00000504835 RNF181Q9P0P0 153 aa11.56□□□□□ -0.56
CDH6-202ENST00000504835 NARFQ9UHQ1 456 aa11.56□□□□□ -0.56
CDH6-202ENST00000504835 RASSF7Q02833 373 aa11.55□□□□□ -0.56
CDH6-202ENST00000504835 NBPF3Q9H094 633 aa11.55□□□□□ -0.56
CDH6-202ENST00000504835 PER1O15534 1290 aaPredicted RBP11.54□□□□□ -0.56
CDH6-202ENST00000504835 ZPR1O75312 459 aa11.54□□□□□ -0.56
CDH6-202ENST00000504835 SLX4Q8IY92 1834 aa11.54□□□□□ -0.56
CDH6-202ENST00000504835 FOSBP53539 338 aa11.54□□□□□ -0.56
CDH6-202ENST00000504835 RRAGCQ9HB90 399 aa11.54□□□□□ -0.56
CDH6-202ENST00000504835 SERPINB2P05120 415 aa11.53□□□□□ -0.56
CDH6-202ENST00000504835 VSIG10Q8N0Z9 540 aa11.53□□□□□ -0.56
CDH6-202ENST00000504835 ZBED2Q9BTP6 218 aa11.53□□□□□ -0.56
CDH6-202ENST00000504835 RYDENQ9NUL5 291 aaKnown RBP11.53□□□□□ -0.56
CDH6-202ENST00000504835 KDM2BQ8NHM5 1336 aa11.52□□□□□ -0.57
CDH6-202ENST00000504835 DIAPH1O60610 1272 aaKnown RBP11.51□□□□□ -0.57
CDH6-202ENST00000504835 CANXP27824 592 aaKnown RBP11.51□□□□□ -0.57
CDH6-202ENST00000504835 EIF5P55010 431 aaKnown RBP11.51□□□□□ -0.57
CDH6-202ENST00000504835 FSTL1Q12841 308 aa11.51□□□□□ -0.57
CDH6-202ENST00000504835 CC2D1BQ5T0F9 858 aaKnown RBP11.51□□□□□ -0.57
CDH6-202ENST00000504835 NFKBIEO00221 500 aa11.5□□□□□ -0.57
CDH6-202ENST00000504835 C16orf71Q8IYS4 520 aaPredicted RBP11.5□□□□□ -0.57
CDH6-202ENST00000504835 IL17REQ8NFR9 667 aa11.5□□□□□ -0.57
CDH6-202ENST00000504835 KLRG1Q96E93 195 aa11.5□□□□□ -0.57
CDH6-202ENST00000504835 ZNF496Q96IT1 587 aaPredicted RBP11.5□□□□□ -0.57
CDH6-202ENST00000504835 DLG5Q8TDM6 1919 aa11.5□□□□□ -0.57
CDH6-202ENST00000504835 HEG1Q9ULI3 1381 aa11.5□□□□□ -0.57
CDH6-202ENST00000504835 ZC3H4Q9UPT8 1303 aaKnown RBP11.5□□□□□ -0.57
CDH6-202ENST00000504835 PPP1R15BQ5SWA1 713 aa11.5□□□□□ -0.57
CDH6-202ENST00000504835 TBC1D9BQ66K14 1250 aa11.5□□□□□ -0.57
CDH6-202ENST00000504835 C2CD5Q86YS7 1000 aa11.5□□□□□ -0.57
CDH6-202ENST00000504835 JMYQ8N9B5 988 aa11.5□□□□□ -0.57
CDH6-202ENST00000504835 CCER1Q8TC90 406 aaPredicted RBP11.5□□□□□ -0.57
CDH6-202ENST00000504835 LMNB1P20700 586 aa11.49□□□□□ -0.57
CDH6-202ENST00000504835 BICDL1Q6ZP65 573 aa11.49□□□□□ -0.57
CDH6-202ENST00000504835 TTLL6Q8N841 843 aa11.49□□□□□ -0.57
CDH6-202ENST00000504835 GLTPD2A6NH11 291 aa11.48□□□□□ -0.57
CDH6-202ENST00000504835 POTECB2RU33 542 aa11.48□□□□□ -0.57
CDH6-202ENST00000504835 CCDC24Q8N4L8 307 aa11.48□□□□□ -0.57
CDH6-202ENST00000504835 CRISPLD2Q9H0B8 497 aa11.48□□□□□ -0.57
CDH6-202ENST00000504835 NPC1L1Q9UHC9 1359 aa11.48□□□□□ -0.57
CDH6-202ENST00000504835 LAMB4A4D0S4 1761 aa11.47□□□□□ -0.57
CDH6-202ENST00000504835 KCNQ3O43525 872 aa11.47□□□□□ -0.57
CDH6-202ENST00000504835 PRR5LQ6MZQ0 368 aa11.47□□□□□ -0.57
CDH6-202ENST00000504835 ZNF790Q6PG37 636 aa11.47□□□□□ -0.57
CDH6-202ENST00000504835 ZDHHC16Q969W1 377 aa11.47□□□□□ -0.57
CDH6-202ENST00000504835 TBC1D2BQ9UPU7 963 aa11.47□□□□□ -0.57
CDH6-202ENST00000504835 CEMIPQ8WUJ3 1361 aa11.47□□□□□ -0.57
CDH6-202ENST00000504835 GNAT3A8MTJ3 354 aa11.46□□□□□ -0.57
CDH6-202ENST00000504835 H0YIN7 160 aa11.46□□□□□ -0.57
CDH6-202ENST00000504835 STARD3NLO95772 234 aa11.46□□□□□ -0.57
CDH6-202ENST00000504835 TTC5Q8N0Z6 440 aa11.46□□□□□ -0.57
CDH6-202ENST00000504835 SMC1BQ8NDV3 1235 aa11.46□□□□□ -0.57
CDH6-202ENST00000504835 NUP98P52948 1817 aa11.46□□□□□ -0.58
CDH6-202ENST00000504835 A0A087WZG4 1122 aa11.45□□□□□ -0.58
CDH6-202ENST00000504835 U2SURPO15042 1029 aaKnown RBP11.45□□□□□ -0.58
CDH6-202ENST00000504835 CAMTA2O94983 1202 aa11.45□□□□□ -0.58
CDH6-202ENST00000504835 A1BGP04217 495 aa11.45□□□□□ -0.58
CDH6-202ENST00000504835 COL13A1Q5TAT6 717 aaPredicted RBP11.45□□□□□ -0.58
CDH6-202ENST00000504835 PHACTR3Q96KR7 559 aa11.45□□□□□ -0.58
CDH6-202ENST00000504835 SCN4AP35499 1836 aa11.45□□□□□ -0.58
CDH6-202ENST00000504835 VEGFAP15692 232 aaPredicted RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms