RNA–Protein interactions for RNA: ENST00000504743.1

ZFYVE28-203, Transcript of zinc finger FYVE-type containing 28, humanhuman

TSL 4

Gene ZFYVE28, Length 576 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28-203ENST00000504743 SSFA2P28290 1259 aa18.52■□□□□ 0.56
ZFYVE28-203ENST00000504743 HLFQ16534 295 aa18.52■□□□□ 0.56
ZFYVE28-203ENST00000504743 SMIM5Q71RC9 77 aa18.52■□□□□ 0.56
ZFYVE28-203ENST00000504743 COL23A1Q86Y22 540 aaPredicted RBP18.52■□□□□ 0.56
ZFYVE28-203ENST00000504743 SIRT2Q8IXJ6 389 aa18.52■□□□□ 0.56
ZFYVE28-203ENST00000504743 CCDC191Q8NCU4 936 aa18.52■□□□□ 0.56
ZFYVE28-203ENST00000504743 SLC16A10Q8TF71 515 aa18.52■□□□□ 0.56
ZFYVE28-203ENST00000504743 ARXQ96QS3 562 aa18.52■□□□□ 0.56
ZFYVE28-203ENST00000504743 HDAC5Q9UQL6 1122 aa18.52■□□□□ 0.56
ZFYVE28-203ENST00000504743 SCN7AQ01118 1682 aa18.52■□□□□ 0.56
ZFYVE28-203ENST00000504743 CWC25Q9NXE8 425 aaPredicted RBP18.51■□□□□ 0.55
ZFYVE28-203ENST00000504743 LRRFIP2Q9Y608 721 aaKnown RBP18.51■□□□□ 0.55
ZFYVE28-203ENST00000504743 QSER1Q2KHR3 1735 aa18.51■□□□□ 0.55
ZFYVE28-203ENST00000504743 NUP98P52948 1817 aa18.51■□□□□ 0.55
ZFYVE28-203ENST00000504743 TRAPPC3LQ5T215 181 aa18.49■□□□□ 0.55
ZFYVE28-203ENST00000504743 AMIGO3Q86WK7 504 aa18.49■□□□□ 0.55
ZFYVE28-203ENST00000504743 UBR3Q6ZT12 1888 aa18.49■□□□□ 0.55
ZFYVE28-203ENST00000504743 LRP5O75197 1615 aa18.49■□□□□ 0.55
ZFYVE28-203ENST00000504743 H7C1W4 665 aa18.48■□□□□ 0.55
ZFYVE28-203ENST00000504743 ADRA2BP18089 450 aa18.48■□□□□ 0.55
ZFYVE28-203ENST00000504743 CASP7P55210 303 aa18.48■□□□□ 0.55
ZFYVE28-203ENST00000504743 MSL1Q68DK7 614 aa18.48■□□□□ 0.55
ZFYVE28-203ENST00000504743 ZNF34Q8IZ26 560 aa18.48■□□□□ 0.55
ZFYVE28-203ENST00000504743 NARFQ9UHQ1 456 aa18.48■□□□□ 0.55
ZFYVE28-203ENST00000504743 C4AP0C0L4 1744 aa18.48■□□□□ 0.55
ZFYVE28-203ENST00000504743 POLD1P28340 1107 aa18.47■□□□□ 0.55
ZFYVE28-203ENST00000504743 RFC4P35249 363 aa18.47■□□□□ 0.55
ZFYVE28-203ENST00000504743 ATP8B2P98198 1209 aa18.47■□□□□ 0.55
ZFYVE28-203ENST00000504743 CLEC4GQ6UXB4 293 aa18.47■□□□□ 0.55
ZFYVE28-203ENST00000504743 NLRP10Q86W26 655 aa18.47■□□□□ 0.55
ZFYVE28-203ENST00000504743 SMC5Q8IY18 1101 aa18.47■□□□□ 0.55
ZFYVE28-203ENST00000504743 SUCLG2Q96I99 432 aa18.47■□□□□ 0.55
ZFYVE28-203ENST00000504743 ZNF652Q9Y2D9 606 aa18.47■□□□□ 0.55
ZFYVE28-203ENST00000504743 HMMRO75330 724 aa18.46■□□□□ 0.55
ZFYVE28-203ENST00000504743 MTX1Q13505 466 aa18.46■□□□□ 0.55
ZFYVE28-203ENST00000504743 KAZALD1Q96I82 304 aa18.46■□□□□ 0.55
ZFYVE28-203ENST00000504743 GPTP24298 496 aa18.45■□□□□ 0.54
ZFYVE28-203ENST00000504743 UBE3BQ7Z3V4 1068 aa18.45■□□□□ 0.54
ZFYVE28-203ENST00000504743 ARHGEF1Q92888 912 aaKnown RBP18.45■□□□□ 0.54
ZFYVE28-203ENST00000504743 GCC1Q96CN9 775 aa18.45■□□□□ 0.54
ZFYVE28-203ENST00000504743 UBN2Q6ZU65 1347 aa18.45■□□□□ 0.54
ZFYVE28-203ENST00000504743 PCCAP05165 728 aaPredicted RBP18.44■□□□□ 0.54
ZFYVE28-203ENST00000504743 SSH3Q8TE77 659 aa18.44■□□□□ 0.54
ZFYVE28-203ENST00000504743 BCL2L12Q9HB09 334 aa18.44■□□□□ 0.54
ZFYVE28-203ENST00000504743 USP42Q9H9J4 1324 aaKnown RBP18.44■□□□□ 0.54
ZFYVE28-203ENST00000504743 PNMA6EA0A0J9YXQ4 647 aa18.43■□□□□ 0.54
ZFYVE28-203ENST00000504743 PTGER2P43116 358 aa18.43■□□□□ 0.54
ZFYVE28-203ENST00000504743 POLA2Q14181 598 aa18.43■□□□□ 0.54
ZFYVE28-203ENST00000504743 PARP10Q53GL7 1025 aa18.43■□□□□ 0.54
ZFYVE28-203ENST00000504743 ZBTB38Q8NAP3 1195 aaPredicted RBP18.43■□□□□ 0.54
ZFYVE28-203ENST00000504743 BICC1Q9H694 974 aaKnown RBP18.43■□□□□ 0.54
ZFYVE28-203ENST00000504743 CDHR2Q9BYE9 1310 aa18.43■□□□□ 0.54
ZFYVE28-203ENST00000504743 ZPR1O75312 459 aa18.42■□□□□ 0.54
ZFYVE28-203ENST00000504743 RABL6Q3YEC7 729 aaPredicted RBP18.42■□□□□ 0.54
ZFYVE28-203ENST00000504743 USPL1Q5W0Q7 1092 aa18.42■□□□□ 0.54
ZFYVE28-203ENST00000504743 PPP1R42Q7Z4L9 355 aa18.42■□□□□ 0.54
ZFYVE28-203ENST00000504743 JARID2Q92833 1246 aaPredicted RBP18.42■□□□□ 0.54
ZFYVE28-203ENST00000504743 DCTPP1Q9H773 170 aa18.42■□□□□ 0.54
ZFYVE28-203ENST00000504743 SRP68Q9UHB9 627 aaKnown RBP18.42■□□□□ 0.54
ZFYVE28-203ENST00000504743 EPHA10Q5JZY3 1008 aa18.41■□□□□ 0.54
ZFYVE28-203ENST00000504743 KLHL34Q8N239 644 aa18.41■□□□□ 0.54
ZFYVE28-203ENST00000504743 NIP7Q9Y221 180 aaKnown RBP eCLIP18.41■□□□□ 0.54
ZFYVE28-203ENST00000504743 COL24A1Q17RW2 1714 aa18.4■□□□□ 0.54
ZFYVE28-203ENST00000504743 SRGAP3O43295 1099 aa18.4■□□□□ 0.54
ZFYVE28-203ENST00000504743 PLA2G12BQ9BX93 195 aa18.4■□□□□ 0.54
ZFYVE28-203ENST00000504743 FOXO4P98177 505 aa18.39■□□□□ 0.53
ZFYVE28-203ENST00000504743 SUSD4Q5VX71 490 aa18.39■□□□□ 0.53
ZFYVE28-203ENST00000504743 SGIP1Q9BQI5 828 aa18.39■□□□□ 0.53
ZFYVE28-203ENST00000504743 UTP14AQ9BVJ6 771 aaKnown RBP18.39■□□□□ 0.53
ZFYVE28-203ENST00000504743 TRMT112Q9UI30 125 aaKnown RBP18.39■□□□□ 0.53
ZFYVE28-203ENST00000504743 PDZRN3Q9UPQ7 1066 aa18.39■□□□□ 0.53
ZFYVE28-203ENST00000504743 NTSR2O95665 410 aa18.38■□□□□ 0.53
ZFYVE28-203ENST00000504743 RTL5Q5HYW3 569 aaPredicted RBP18.38■□□□□ 0.53
ZFYVE28-203ENST00000504743 TBC1D9BQ66K14 1250 aa18.38■□□□□ 0.53
ZFYVE28-203ENST00000504743 NLGN1Q8N2Q7 840 aa18.38■□□□□ 0.53
ZFYVE28-203ENST00000504743 FAM89AQ96GI7 184 aa18.38■□□□□ 0.53
ZFYVE28-203ENST00000504743 GYS1P13807 737 aa18.37■□□□□ 0.53
ZFYVE28-203ENST00000504743 NUCB1Q02818 461 aa18.37■□□□□ 0.53
ZFYVE28-203ENST00000504743 SH3TC1Q8TE82 1336 aa18.37■□□□□ 0.53
ZFYVE28-203ENST00000504743 LAMB2P55268 1798 aa18.37■□□□□ 0.53
ZFYVE28-203ENST00000504743 IRS4O14654 1257 aaPredicted RBP18.35■□□□□ 0.53
ZFYVE28-203ENST00000504743 MMP10P09238 476 aa18.35■□□□□ 0.53
ZFYVE28-203ENST00000504743 LMBR1LQ6UX01 489 aa18.35■□□□□ 0.53
ZFYVE28-203ENST00000504743 CHD1LQ86WJ1 897 aa18.35■□□□□ 0.53
ZFYVE28-203ENST00000504743 SYNE4Q8N205 404 aa18.35■□□□□ 0.53
ZFYVE28-203ENST00000504743 SETDB2Q96T68 719 aa18.35■□□□□ 0.53
ZFYVE28-203ENST00000504743 NOP58Q9Y2X3 529 aaKnown RBP18.35■□□□□ 0.53
ZFYVE28-203ENST00000504743 PDE8AO60658 829 aa18.34■□□□□ 0.53
ZFYVE28-203ENST00000504743 CSF1RP07333 972 aa18.34■□□□□ 0.53
ZFYVE28-203ENST00000504743 FHDC1Q9C0D6 1143 aaPredicted RBP18.34■□□□□ 0.53
ZFYVE28-203ENST00000504743 PARP3Q9Y6F1 533 aa18.34■□□□□ 0.53
ZFYVE28-203ENST00000504743 DDX60Q8IY21 1712 aaKnown RBP18.34■□□□□ 0.53
ZFYVE28-203ENST00000504743 SURF6O75683 361 aaKnown RBP18.33■□□□□ 0.52
ZFYVE28-203ENST00000504743 HSP90B1P14625 803 aaKnown RBP18.33■□□□□ 0.52
ZFYVE28-203ENST00000504743 RFX5P48382 616 aaPredicted RBP18.33■□□□□ 0.52
ZFYVE28-203ENST00000504743 HSP90AB4PQ58FF6 505 aa18.33■□□□□ 0.52
ZFYVE28-203ENST00000504743 ANKRD45Q5TZF3 282 aa18.33■□□□□ 0.52
ZFYVE28-203ENST00000504743 BICDL1Q6ZP65 573 aa18.33■□□□□ 0.52
ZFYVE28-203ENST00000504743 SKAP1Q86WV1 359 aa18.33■□□□□ 0.52
ZFYVE28-203ENST00000504743 PELP1Q8IZL8 1130 aaKnown RBP18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms