RNA–Protein interactions for RNA: ENST00000504669.5

ITGA1-203, Transcript of integrin subunit alpha 1, humanhuman

TSL 1 (best)

Gene ITGA1, Length 6,276 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA1-203ENST00000504669 MAP4K4O95819 1239 aaPredicted RBP11.87□□□□□ -0.51
ITGA1-203ENST00000504669 HNRNPCP07910 306 aaKnown RBP eCLIP11.87□□□□□ -0.51
ITGA1-203ENST00000504669 MATR3P43243 847 aaKnown RBP eCLIP11.87□□□□□ -0.51
ITGA1-203ENST00000504669 EVCP57679 992 aa11.87□□□□□ -0.51
ITGA1-203ENST00000504669 SPDL1Q96EA4 605 aa11.87□□□□□ -0.51
ITGA1-203ENST00000504669 RMI1Q9H9A7 625 aa11.87□□□□□ -0.51
ITGA1-203ENST00000504669 CTAGE5O15320 804 aa11.87□□□□□ -0.51
ITGA1-203ENST00000504669 ZNF131P52739 623 aa11.87□□□□□ -0.51
ITGA1-203ENST00000504669 CTAGE9A4FU28 777 aa11.86□□□□□ -0.51
ITGA1-203ENST00000504669 TXNDC9O14530 226 aa11.86□□□□□ -0.51
ITGA1-203ENST00000504669 RHOXF2BP0C7M4 288 aa11.86□□□□□ -0.51
ITGA1-203ENST00000504669 SKOR1P84550 965 aa11.86□□□□□ -0.51
ITGA1-203ENST00000504669 NBPF9Q3BBW0 867 aa11.86□□□□□ -0.51
ITGA1-203ENST00000504669 GRAMD4Q6IC98 578 aa11.86□□□□□ -0.51
ITGA1-203ENST00000504669 CCDC186Q7Z3E2 898 aa11.86□□□□□ -0.51
ITGA1-203ENST00000504669 PANK1Q8TE04 598 aa11.86□□□□□ -0.51
ITGA1-203ENST00000504669 RHOXF2Q9BQY4 288 aa11.86□□□□□ -0.51
ITGA1-203ENST00000504669 ZCCHC6Q5VYS8 1495 aaKnown RBP11.86□□□□□ -0.51
ITGA1-203ENST00000504669 BAG4O95429 457 aaKnown RBP11.86□□□□□ -0.51
ITGA1-203ENST00000504669 GSTTP1A0A1W2PQM5 241 aa11.86□□□□□ -0.51
ITGA1-203ENST00000504669 NBPF10Q6P3W6 841 aaKnown RBP11.86□□□□□ -0.51
ITGA1-203ENST00000504669 JMYQ8N9B5 988 aa11.86□□□□□ -0.51
ITGA1-203ENST00000504669 EHBP1Q8NDI1 1231 aa11.86□□□□□ -0.51
ITGA1-203ENST00000504669 TSC22D4Q9Y3Q8 395 aa11.86□□□□□ -0.51
ITGA1-203ENST00000504669 ATAD2Q6PL18 1390 aa11.86□□□□□ -0.51
ITGA1-203ENST00000504669 HIP1RO75146 1068 aa11.86□□□□□ -0.51
ITGA1-203ENST00000504669 PPP1R15AO75807 674 aaPredicted RBP11.86□□□□□ -0.51
ITGA1-203ENST00000504669 RNF216Q9NWF9 866 aaPredicted RBP11.86□□□□□ -0.51
ITGA1-203ENST00000504669 PPP1R9AQ9ULJ8 1098 aa11.86□□□□□ -0.51
ITGA1-203ENST00000504669 MVPQ14764 893 aaKnown RBP11.86□□□□□ -0.51
ITGA1-203ENST00000504669 TACC3Q9Y6A5 838 aa11.86□□□□□ -0.51
ITGA1-203ENST00000504669 SLC4A8Q2Y0W8 1093 aa11.85□□□□□ -0.51
ITGA1-203ENST00000504669 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.85□□□□□ -0.51
ITGA1-203ENST00000504669 STK38LQ9Y2H1 464 aa11.85□□□□□ -0.51
ITGA1-203ENST00000504669 KDM4AO75164 1064 aa11.85□□□□□ -0.51
ITGA1-203ENST00000504669 HNRNPH2P55795 449 aaKnown RBP11.85□□□□□ -0.51
ITGA1-203ENST00000504669 BIN2Q9UBW5 565 aaPredicted RBP11.85□□□□□ -0.51
ITGA1-203ENST00000504669 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.85□□□□□ -0.51
ITGA1-203ENST00000504669 FSD2A1L4K1 749 aa11.85□□□□□ -0.51
ITGA1-203ENST00000504669 YEATS4O95619 227 aa11.85□□□□□ -0.51
ITGA1-203ENST00000504669 ARL10Q8N8L6 244 aa11.85□□□□□ -0.51
ITGA1-203ENST00000504669 NUP88Q99567 741 aaPredicted RBP11.85□□□□□ -0.51
ITGA1-203ENST00000504669 PUF60Q9UHX1 559 aaKnown RBP11.85□□□□□ -0.51
ITGA1-203ENST00000504669 CDKL5O76039 1030 aa11.85□□□□□ -0.51
ITGA1-203ENST00000504669 TUBBP07437 444 aa11.85□□□□□ -0.51
ITGA1-203ENST00000504669 ZBTB16Q05516 673 aa11.84□□□□□ -0.51
ITGA1-203ENST00000504669 DEUP1Q05D60 604 aa11.84□□□□□ -0.51
ITGA1-203ENST00000504669 E2F5Q15329 346 aa11.84□□□□□ -0.51
ITGA1-203ENST00000504669 HSP90AA5PQ58FG0 334 aa11.84□□□□□ -0.51
ITGA1-203ENST00000504669 ARHGEF2Q92974 986 aaKnown RBP11.84□□□□□ -0.51
ITGA1-203ENST00000504669 LARP1BQ659C4 914 aaKnown RBP11.84□□□□□ -0.51
ITGA1-203ENST00000504669 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.84□□□□□ -0.51
ITGA1-203ENST00000504669 ANKRD30AQ9BXX3 1397 aa11.84□□□□□ -0.51
ITGA1-203ENST00000504669 RAD21O60216 631 aa11.84□□□□□ -0.51
ITGA1-203ENST00000504669 PTGS1P23219 599 aa11.84□□□□□ -0.51
ITGA1-203ENST00000504669 ATP2B2Q01814 1243 aa11.84□□□□□ -0.51
ITGA1-203ENST00000504669 DUSP27Q5VZP5 1158 aa11.84□□□□□ -0.51
ITGA1-203ENST00000504669 PPP1R21Q6ZMI0 780 aa11.84□□□□□ -0.51
ITGA1-203ENST00000504669 CCDC63Q8NA47 563 aa11.84□□□□□ -0.51
ITGA1-203ENST00000504669 SCOCQ9UIL1 159 aa11.84□□□□□ -0.51
ITGA1-203ENST00000504669 FERP16591 822 aa11.83□□□□□ -0.52
ITGA1-203ENST00000504669 CENPKQ9BS16 269 aa11.83□□□□□ -0.52
ITGA1-203ENST00000504669 LRRC45Q96CN5 670 aa11.83□□□□□ -0.52
ITGA1-203ENST00000504669 GOLGA6BA6NDN3 693 aa11.83□□□□□ -0.52
ITGA1-203ENST00000504669 E7EVH7 732 aa11.83□□□□□ -0.52
ITGA1-203ENST00000504669 ATP2B1P20020 1258 aa11.83□□□□□ -0.52
ITGA1-203ENST00000504669 DNA2P51530 1060 aa11.83□□□□□ -0.52
ITGA1-203ENST00000504669 CFAP58Q5T655 872 aa11.83□□□□□ -0.52
ITGA1-203ENST00000504669 GNL3LQ9NVN8 582 aaKnown RBP11.83□□□□□ -0.52
ITGA1-203ENST00000504669 TNIKQ9UKE5 1360 aa11.83□□□□□ -0.52
ITGA1-203ENST00000504669 GIGYF1O75420 1035 aaPredicted RBP11.83□□□□□ -0.52
ITGA1-203ENST00000504669 RWDD2BP57060 319 aa11.83□□□□□ -0.52
ITGA1-203ENST00000504669 MSANTD4Q8NCY6 345 aa11.83□□□□□ -0.52
ITGA1-203ENST00000504669 RAD51AP2Q09MP3 1159 aa11.82□□□□□ -0.52
ITGA1-203ENST00000504669 RALYLQ86SE5 291 aaKnown RBP11.82□□□□□ -0.52
ITGA1-203ENST00000504669 DAAM1Q9Y4D1 1078 aa11.82□□□□□ -0.52
ITGA1-203ENST00000504669 TMEM132AQ24JP5 1023 aa11.82□□□□□ -0.52
ITGA1-203ENST00000504669 SRGAP3O43295 1099 aa11.82□□□□□ -0.52
ITGA1-203ENST00000504669 MYO1CO00159 1063 aa11.82□□□□□ -0.52
ITGA1-203ENST00000504669 PRIM1P49642 420 aaKnown RBP11.82□□□□□ -0.52
ITGA1-203ENST00000504669 CKAP2LQ8IYA6 745 aa11.82□□□□□ -0.52
ITGA1-203ENST00000504669 FAN1Q9Y2M0 1017 aa11.82□□□□□ -0.52
ITGA1-203ENST00000504669 RRP7AQ9Y3A4 280 aaKnown RBP11.82□□□□□ -0.52
ITGA1-203ENST00000504669 ZNF711Q9Y462 761 aa11.82□□□□□ -0.52
ITGA1-203ENST00000504669 FHAD1B1AJZ9 1412 aa11.82□□□□□ -0.52
ITGA1-203ENST00000504669 CNTLNQ9NXG0 1405 aa11.82□□□□□ -0.52
ITGA1-203ENST00000504669 OLFML1Q6UWY5 402 aa11.82□□□□□ -0.52
ITGA1-203ENST00000504669 EIF2AQ9BY44 585 aaKnown RBP11.82□□□□□ -0.52
ITGA1-203ENST00000504669 DHX16O60231 1041 aaKnown RBP11.81□□□□□ -0.52
ITGA1-203ENST00000504669 hCG_2014768A0A024R1R8 64 aa11.81□□□□□ -0.52
ITGA1-203ENST00000504669 KRT10P13645 584 aa11.81□□□□□ -0.52
ITGA1-203ENST00000504669 CNTROBQ8N137 903 aa11.81□□□□□ -0.52
ITGA1-203ENST00000504669 RGS22Q8NE09 1264 aa11.81□□□□□ -0.52
ITGA1-203ENST00000504669 HCLS1P14317 486 aaPredicted RBP11.81□□□□□ -0.52
ITGA1-203ENST00000504669 ANKRD1Q15327 319 aa11.81□□□□□ -0.52
ITGA1-203ENST00000504669 HOMER2Q9NSB8 354 aa11.81□□□□□ -0.52
ITGA1-203ENST00000504669 DDX19AQ9NUU7 478 aaKnown RBP11.81□□□□□ -0.52
ITGA1-203ENST00000504669 SCINQ9Y6U3 715 aa11.81□□□□□ -0.52
ITGA1-203ENST00000504669 KRT75O95678 551 aa11.81□□□□□ -0.52
ITGA1-203ENST00000504669 TAF11Q15544 211 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms