RNA–Protein interactions for RNA: ENST00000504531.2

CASC9-201, Transcript of cancer susceptibility 9, humanhuman

TSL 1 (best) BASIC

Gene CASC9, Length 1,164 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC9-201ENST00000504531 NRXN3Q9Y4C0 1643 aa11.17□□□□□ -0.62
CASC9-201ENST00000504531 WASLO00401 505 aaPredicted RBP11.16□□□□□ -0.62
CASC9-201ENST00000504531 IGHDP01880 384 aa11.16□□□□□ -0.62
CASC9-201ENST00000504531 NEFMP07197 916 aa11.16□□□□□ -0.62
CASC9-201ENST00000504531 SH3BP2P78314 561 aa11.16□□□□□ -0.62
CASC9-201ENST00000504531 SKOR1P84550 965 aa11.16□□□□□ -0.62
CASC9-201ENST00000504531 RC3H1Q5TC82 1133 aaKnown RBP11.16□□□□□ -0.62
CASC9-201ENST00000504531 TXNDC2Q86VQ3 553 aa11.16□□□□□ -0.62
CASC9-201ENST00000504531 DZIP1LQ8IYY4 767 aaKnown RBP11.16□□□□□ -0.62
CASC9-201ENST00000504531 RGS17Q9UGC6 210 aaPredicted RBP11.16□□□□□ -0.62
CASC9-201ENST00000504531 ZC3H4Q9UPT8 1303 aaKnown RBP11.15□□□□□ -0.62
CASC9-201ENST00000504531 APBB1O00213 710 aa11.15□□□□□ -0.62
CASC9-201ENST00000504531 LMOD3Q0VAK6 560 aa11.15□□□□□ -0.62
CASC9-201ENST00000504531 LINC01559Q495D7 138 aa11.15□□□□□ -0.62
CASC9-201ENST00000504531 CABP1Q9NZU7 370 aa11.15□□□□□ -0.62
CASC9-201ENST00000504531 STK26Q9P289 416 aa11.15□□□□□ -0.62
CASC9-201ENST00000504531 COG6Q9Y2V7 657 aa11.15□□□□□ -0.62
CASC9-201ENST00000504531 EID1Q9Y6B2 187 aa11.15□□□□□ -0.62
CASC9-201ENST00000504531 TNFRSF10AO00220 468 aa11.14□□□□□ -0.63
CASC9-201ENST00000504531 EIF5BO60841 1220 aaKnown RBP11.14□□□□□ -0.63
CASC9-201ENST00000504531 TNNT2P45379 298 aaPredicted RBP11.14□□□□□ -0.63
CASC9-201ENST00000504531 NR6A1Q15406 480 aa11.14□□□□□ -0.63
CASC9-201ENST00000504531 PANK1Q8TE04 598 aa11.14□□□□□ -0.63
CASC9-201ENST00000504531 GGNBP2Q9H3C7 697 aa11.14□□□□□ -0.63
CASC9-201ENST00000504531 MON2Q7Z3U7 1717 aa11.14□□□□□ -0.63
CASC9-201ENST00000504531 KIF24Q5T7B8 1368 aa11.14□□□□□ -0.63
CASC9-201ENST00000504531 RIPK4P57078 832 aa11.13□□□□□ -0.63
CASC9-201ENST00000504531 ATF7IPQ6VMQ6 1270 aa11.13□□□□□ -0.63
CASC9-201ENST00000504531 EHBP1Q8NDI1 1231 aa11.13□□□□□ -0.63
CASC9-201ENST00000504531 MRGPRX2Q96LB1 330 aa11.13□□□□□ -0.63
CASC9-201ENST00000504531 POLKQ9UBT6 870 aa11.13□□□□□ -0.63
CASC9-201ENST00000504531 FKBPLQ9UIM3 349 aa11.13□□□□□ -0.63
CASC9-201ENST00000504531 PIK3R4Q99570 1358 aa11.13□□□□□ -0.63
CASC9-201ENST00000504531 AKAP12Q02952 1782 aa11.13□□□□□ -0.63
CASC9-201ENST00000504531 VARSP26640 1264 aaKnown RBP11.12□□□□□ -0.63
CASC9-201ENST00000504531 NFE2L2Q16236 605 aa11.12□□□□□ -0.63
CASC9-201ENST00000504531 POTEAQ6S8J7 498 aa11.12□□□□□ -0.63
CASC9-201ENST00000504531 BPHLQ86WA6 291 aaPredicted RBP11.12□□□□□ -0.63
CASC9-201ENST00000504531 SMC5Q8IY18 1101 aa11.12□□□□□ -0.63
CASC9-201ENST00000504531 CYP4X1Q8N118 509 aa11.12□□□□□ -0.63
CASC9-201ENST00000504531 HMX1Q9NP08 348 aaPredicted RBP11.12□□□□□ -0.63
CASC9-201ENST00000504531 IFT57Q9NWB7 429 aa11.12□□□□□ -0.63
CASC9-201ENST00000504531 RRP7AQ9Y3A4 280 aaKnown RBP11.12□□□□□ -0.63
CASC9-201ENST00000504531 U2SURPO15042 1029 aaKnown RBP11.11□□□□□ -0.63
CASC9-201ENST00000504531 ZNF853P0CG23 659 aa11.11□□□□□ -0.63
CASC9-201ENST00000504531 DEKP35659 375 aaKnown RBP11.11□□□□□ -0.63
CASC9-201ENST00000504531 GNAI1P63096 354 aa11.11□□□□□ -0.63
CASC9-201ENST00000504531 EXOSC9Q06265 439 aaKnown RBP11.11□□□□□ -0.63
CASC9-201ENST00000504531 BECN1Q14457 450 aa11.11□□□□□ -0.63
CASC9-201ENST00000504531 FTSJ3Q8IY81 847 aaKnown RBP11.11□□□□□ -0.63
CASC9-201ENST00000504531 FRAT1Q92837 279 aaPredicted RBP11.11□□□□□ -0.63
CASC9-201ENST00000504531 TMEM2Q9UHN6 1383 aa11.11□□□□□ -0.63
CASC9-201ENST00000504531 MAP2P11137 1827 aaKnown RBP11.1□□□□□ -0.63
CASC9-201ENST00000504531 RLBP1P12271 317 aa11.1□□□□□ -0.63
CASC9-201ENST00000504531 IL13P35225 146 aa11.1□□□□□ -0.63
CASC9-201ENST00000504531 AGERQ15109 404 aa11.1□□□□□ -0.63
CASC9-201ENST00000504531 NPM2Q86SE8 214 aaKnown RBP11.1□□□□□ -0.63
CASC9-201ENST00000504531 PROSER2Q86WR7 435 aaPredicted RBP11.1□□□□□ -0.63
CASC9-201ENST00000504531 SNIP1Q8TAD8 396 aaKnown RBP11.1□□□□□ -0.63
CASC9-201ENST00000504531 UPF2Q9HAU5 1272 aaKnown RBP11.1□□□□□ -0.63
CASC9-201ENST00000504531 PLEKHG1Q9ULL1 1385 aa11.1□□□□□ -0.63
CASC9-201ENST00000504531 ZNF142P52746 1687 aaPredicted RBP11.1□□□□□ -0.63
CASC9-201ENST00000504531 TRIM27P14373 513 aa11.09□□□□□ -0.63
CASC9-201ENST00000504531 LTKP29376 864 aa11.09□□□□□ -0.63
CASC9-201ENST00000504531 SAFB2Q14151 953 aaKnown RBP eCLIP11.09□□□□□ -0.63
CASC9-201ENST00000504531 PDXDC2PQ6P474 469 aa11.09□□□□□ -0.63
CASC9-201ENST00000504531 SSH1Q8WYL5 1049 aa11.09□□□□□ -0.63
CASC9-201ENST00000504531 NUDT16Q96DE0 195 aaKnown RBP11.09□□□□□ -0.63
CASC9-201ENST00000504531 SMC4Q9NTJ3 1288 aa11.09□□□□□ -0.63
CASC9-201ENST00000504531 ZBTB40Q9NUA8 1239 aa11.09□□□□□ -0.63
CASC9-201ENST00000504531 TOR4AQ9NXH8 423 aa11.09□□□□□ -0.63
CASC9-201ENST00000504531 UBR1Q8IWV7 1749 aa11.09□□□□□ -0.63
CASC9-201ENST00000504531 LRRC7Q96NW7 1537 aa11.09□□□□□ -0.63
CASC9-201ENST00000504531 USP19O94966 1318 aa11.09□□□□□ -0.63
CASC9-201ENST00000504531 METP08581 1390 aa11.08□□□□□ -0.64
CASC9-201ENST00000504531 TTC24A2A3L6 582 aaPredicted RBP11.08□□□□□ -0.64
CASC9-201ENST00000504531 RGS3P49796 1198 aa11.08□□□□□ -0.64
CASC9-201ENST00000504531 FAM174AQ8TBP5 190 aa11.08□□□□□ -0.64
CASC9-201ENST00000504531 COG3Q96JB2 828 aa11.08□□□□□ -0.64
CASC9-201ENST00000504531 PTCH1Q13635 1447 aa11.08□□□□□ -0.64
CASC9-201ENST00000504531 NRKQ7Z2Y5 1582 aa11.07□□□□□ -0.64
CASC9-201ENST00000504531 ITSN1Q15811 1721 aa11.07□□□□□ -0.64
CASC9-201ENST00000504531 DGAT1O75907 488 aa11.07□□□□□ -0.64
CASC9-201ENST00000504531 FOXJ1Q92949 421 aa11.07□□□□□ -0.64
CASC9-201ENST00000504531 TRIM34Q9BYJ4 488 aa11.07□□□□□ -0.64
CASC9-201ENST00000504531 PRM3Q9NNZ6 103 aa11.07□□□□□ -0.64
CASC9-201ENST00000504531 GPSM3Q9Y4H4 160 aa11.07□□□□□ -0.64
CASC9-201ENST00000504531 DIP2AQ14689 1571 aa11.07□□□□□ -0.64
CASC9-201ENST00000504531 USP31Q70CQ4 1352 aa11.06□□□□□ -0.64
CASC9-201ENST00000504531 SLIT1O75093 1534 aa11.06□□□□□ -0.64
CASC9-201ENST00000504531 TOPAZ1Q8N9V7 1692 aa11.06□□□□□ -0.64
CASC9-201ENST00000504531 PRKAR2BP31323 418 aa11.06□□□□□ -0.64
CASC9-201ENST00000504531 MEX3CQ5U5Q3 659 aaKnown RBP11.06□□□□□ -0.64
CASC9-201ENST00000504531 SH3BP5LQ7L8J4 393 aa11.06□□□□□ -0.64
CASC9-201ENST00000504531 WAPLQ7Z5K2 1190 aa11.06□□□□□ -0.64
CASC9-201ENST00000504531 SH3RF1Q7Z6J0 888 aa11.06□□□□□ -0.64
CASC9-201ENST00000504531 MPNDQ8N594 471 aa11.06□□□□□ -0.64
CASC9-201ENST00000504531 EPS8L1Q8TE68 723 aa11.06□□□□□ -0.64
CASC9-201ENST00000504531 GCC1Q96CN9 775 aa11.06□□□□□ -0.64
CASC9-201ENST00000504531 GJD4Q96KN9 370 aaPredicted RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms