RNA–Protein interactions for RNA: ENST00000504440.1

NPHP3-AS1-202, NPHP3 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP3-AS1, Length 2,507 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-AS1-202ENST00000504440 TBC1D9Q6ZT07 1266 aa8.18□□□□□ -1.1
NPHP3-AS1-202ENST00000504440 TNPO1Q92973 898 aaKnown RBP8.18□□□□□ -1.1
NPHP3-AS1-202ENST00000504440 LRRC7Q96NW7 1537 aa8.17□□□□□ -1.1
NPHP3-AS1-202ENST00000504440 ST18O60284 1047 aa8.17□□□□□ -1.1
NPHP3-AS1-202ENST00000504440 TMCO4Q5TGY1 634 aa8.17□□□□□ -1.1
NPHP3-AS1-202ENST00000504440 ZNF687Q8N1G0 1237 aa8.17□□□□□ -1.1
NPHP3-AS1-202ENST00000504440 LRCH3Q96II8 777 aa8.17□□□□□ -1.1
NPHP3-AS1-202ENST00000504440 FAM135BQ49AJ0 1406 aa8.16□□□□□ -1.1
NPHP3-AS1-202ENST00000504440 PLEKHG1Q9ULL1 1385 aa8.16□□□□□ -1.1
NPHP3-AS1-202ENST00000504440 HSP90AB1P08238 724 aaKnown RBP8.16□□□□□ -1.1
NPHP3-AS1-202ENST00000504440 TWISTNBQ3B726 338 aaPredicted RBP8.16□□□□□ -1.1
NPHP3-AS1-202ENST00000504440 BMP2KLQ5H9B9 411 aa8.16□□□□□ -1.1
NPHP3-AS1-202ENST00000504440 TXNDC2Q86VQ3 553 aa8.16□□□□□ -1.1
NPHP3-AS1-202ENST00000504440 PNNQ9H307 717 aaKnown RBP8.16□□□□□ -1.1
NPHP3-AS1-202ENST00000504440 MAFBQ9Y5Q3 323 aaPredicted RBP8.16□□□□□ -1.1
NPHP3-AS1-202ENST00000504440 ZNF853P0CG23 659 aa8.15□□□□□ -1.1
NPHP3-AS1-202ENST00000504440 Q3C1V9 767 aa8.15□□□□□ -1.1
NPHP3-AS1-202ENST00000504440 DESI1Q6ICB0 168 aa8.15□□□□□ -1.1
NPHP3-AS1-202ENST00000504440 GAS2L3Q86XJ1 694 aa8.15□□□□□ -1.1
NPHP3-AS1-202ENST00000504440 OTUD7AQ8TE49 926 aaPredicted RBP8.15□□□□□ -1.1
NPHP3-AS1-202ENST00000504440 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.15□□□□□ -1.1
NPHP3-AS1-202ENST00000504440 ADAMTS13Q76LX8 1427 aa8.15□□□□□ -1.1
NPHP3-AS1-202ENST00000504440 FBXO45P0C2W1 286 aa8.15□□□□□ -1.1
NPHP3-AS1-202ENST00000504440 GSPT1P15170 499 aaKnown RBP8.15□□□□□ -1.1
NPHP3-AS1-202ENST00000504440 SOX11P35716 441 aa8.15□□□□□ -1.1
NPHP3-AS1-202ENST00000504440 PDE4CQ08493 712 aa8.15□□□□□ -1.1
NPHP3-AS1-202ENST00000504440 LYPD8Q6UX82 237 aa8.15□□□□□ -1.1
NPHP3-AS1-202ENST00000504440 SNX21Q969T3 373 aa8.15□□□□□ -1.1
NPHP3-AS1-202ENST00000504440 USTQ9Y2C2 406 aa8.15□□□□□ -1.1
NPHP3-AS1-202ENST00000504440 EID1Q9Y6B2 187 aa8.15□□□□□ -1.1
NPHP3-AS1-202ENST00000504440 GAS2L2Q8NHY3 880 aa8.14□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 MED14O60244 1454 aa8.14□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 GNAI1P63096 354 aa8.14□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 PNMA1Q8ND90 353 aa8.14□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 GCC1Q96CN9 775 aa8.14□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 USB1Q9BQ65 265 aaKnown RBP8.14□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 IFT57Q9NWB7 429 aa8.14□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 METP08581 1390 aa8.14□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 SMARCA5O60264 1052 aaPredicted RBP8.13□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 HSP90AA1P07900 732 aaKnown RBP8.13□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 SSFA2P28290 1259 aa8.13□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 MAP10Q9P2G4 905 aa8.13□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 ABCC4O15439 1325 aa8.13□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 NCOA3Q9Y6Q9 1424 aa8.13□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 PIK3CDO00329 1044 aa8.13□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 MCM10Q7L590 875 aa8.13□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 PLEKHM2Q8IWE5 1019 aa8.13□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 ARHGAP45Q92619 1136 aa8.13□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 MIS18AQ9NYP9 233 aa8.13□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 MAP2P11137 1827 aaKnown RBP8.13□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 DLC1Q96QB1 1528 aa8.13□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 WASLO00401 505 aaPredicted RBP8.12□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 BRD1O95696 1058 aa8.12□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 RAB3GAP1Q15042 981 aa8.12□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 NUDT16Q96DE0 195 aaKnown RBP8.12□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 GRPEL1Q9HAV7 217 aa8.12□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 ANKRD26Q9UPS8 1709 aa8.12□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 POTEB3A0JP26 581 aa8.12□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 APLP1P51693 650 aa8.12□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 ADGRD1Q6QNK2 874 aa8.12□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 POTEBQ6S5H4 581 aa8.12□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 SCUBE3Q8IX30 993 aa8.12□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 MTMR7Q9Y216 660 aa8.12□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 PIK3R4Q99570 1358 aa8.12□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 PTCH1Q13635 1447 aa8.12□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 KNDC1Q76NI1 1749 aa8.12□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 K7ELQ4 463 aaPredicted RBP8.11□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 NR1H3Q13133 447 aa8.11□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 SULT6B1Q6IMI4 303 aa8.11□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 BRICD5Q6PL45 260 aa8.11□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 COG3Q96JB2 828 aa8.11□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 FKBPLQ9UIM3 349 aa8.11□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 DIP2AQ14689 1571 aa8.11□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 CPS1P31327 1500 aa8.11□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 TECPR2O15040 1411 aa8.11□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 ERBB4Q15303 1308 aa8.11□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 TK2O00142 265 aa8.11□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 ATP9BO43861 1147 aa8.11□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 ANKLE2Q86XL3 938 aa8.11□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 RGS22Q8NE09 1264 aa8.11□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 ZNF428Q96B54 188 aa8.11□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 CHAMP1Q96JM3 812 aa8.11□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 TBX22Q9Y458 520 aa8.11□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 KIF20BQ96Q89 1820 aa8.11□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 TMEM88BA6NKF7 163 aa8.1□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 ZBBXA8MT70 800 aa8.1□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 CDC45O75419 566 aa8.1□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 MRE11P49959 708 aa8.1□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 BCAMP50895 628 aa8.1□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 PKP1Q13835 747 aa8.1□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 SLC26A8Q96RN1 970 aa8.1□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 DCTPP1Q9H773 170 aa8.1□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 CPSF1Q10570 1443 aaKnown RBP8.1□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 PRR36Q9H6K5 1346 aa8.1□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 CALD1Q05682 793 aaKnown RBP8.1□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 EIF4A2Q14240 407 aaKnown RBP8.1□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 MEIS3Q99687 375 aa8.1□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 API5Q9BZZ5 524 aaKnown RBP8.1□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 NPHP4O75161 1426 aaPredicted RBP8.1□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 FOXO3O43524 673 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms