RNA–Protein interactions for RNA: ENST00000504044.1

NFKB1-204, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2

Gene NFKB1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-204ENST00000504044 RBM17Q96I25 401 aaKnown RBP23.05■■□□□ 1.28
NFKB1-204ENST00000504044 TMX4Q9H1E5 349 aaPredicted RBP23.05■■□□□ 1.28
NFKB1-204ENST00000504044 TRMT112Q9UI30 125 aaKnown RBP23.05■■□□□ 1.28
NFKB1-204ENST00000504044 CCER2I3L3R5 266 aa23.04■■□□□ 1.28
NFKB1-204ENST00000504044 HSP90B1P14625 803 aaKnown RBP23.04■■□□□ 1.28
NFKB1-204ENST00000504044 CRY2Q49AN0 593 aa23.04■■□□□ 1.28
NFKB1-204ENST00000504044 CCDC93Q567U6 631 aa23.04■■□□□ 1.28
NFKB1-204ENST00000504044 NLRP10Q86W26 655 aa23.04■■□□□ 1.28
NFKB1-204ENST00000504044 TAOK3Q9H2K8 898 aa23.04■■□□□ 1.28
NFKB1-204ENST00000504044 UTRNP46939 3433 aa23.04■■□□□ 1.28
NFKB1-204ENST00000504044 SH3TC1Q8TE82 1336 aa23.04■■□□□ 1.28
NFKB1-204ENST00000504044 ABCC12Q96J65 1359 aa23.03■■□□□ 1.28
NFKB1-204ENST00000504044 ANKRD31Q8N7Z5 1873 aa23.03■■□□□ 1.28
NFKB1-204ENST00000504044 GOLGB1Q14789 3259 aaKnown RBP23.03■■□□□ 1.28
NFKB1-204ENST00000504044 NUP98P52948 1817 aa23.03■■□□□ 1.28
NFKB1-204ENST00000504044 RASSF7Q02833 373 aa23.02■■□□□ 1.28
NFKB1-204ENST00000504044 CC2D2BQ6DHV5 1058 aa23.02■■□□□ 1.28
NFKB1-204ENST00000504044 RTKN2Q8IZC4 609 aa23.02■■□□□ 1.28
NFKB1-204ENST00000504044 KDM2BQ8NHM5 1336 aa23.02■■□□□ 1.28
NFKB1-204ENST00000504044 LTBP3Q9NS15 1303 aa23.02■■□□□ 1.28
NFKB1-204ENST00000504044 FANCIQ9NVI1 1328 aa23.02■■□□□ 1.28
NFKB1-204ENST00000504044 GRIPAP1Q4V328 841 aa23.01■■□□□ 1.27
NFKB1-204ENST00000504044 SLC10A5Q5PT55 438 aa23.01■■□□□ 1.27
NFKB1-204ENST00000504044 TSPYL6Q8N831 410 aa23.01■■□□□ 1.27
NFKB1-204ENST00000504044 HOXA10P31260 410 aaPredicted RBP23■■□□□ 1.27
NFKB1-204ENST00000504044 NFKBIEO00221 500 aa22.99■■□□□ 1.27
NFKB1-204ENST00000504044 TRIM28Q13263 835 aaKnown RBP22.99■■□□□ 1.27
NFKB1-204ENST00000504044 CRAMP1Q96RY5 1269 aa22.99■■□□□ 1.27
NFKB1-204ENST00000504044 ISCA1Q9BUE6 129 aa22.99■■□□□ 1.27
NFKB1-204ENST00000504044 PHAXQ9H814 394 aaKnown RBP22.99■■□□□ 1.27
NFKB1-204ENST00000504044 NEXNQ0ZGT2 675 aa22.98■■□□□ 1.27
NFKB1-204ENST00000504044 COL11A2P13942 1736 aaPredicted RBP22.98■■□□□ 1.27
NFKB1-204ENST00000504044 C1QTNF8P60827 252 aa22.97■■□□□ 1.27
NFKB1-204ENST00000504044 DPY19L2Q6NUT2 758 aa22.97■■□□□ 1.27
NFKB1-204ENST00000504044 ATP5J2-PTCD1G3V325 749 aa22.96■■□□□ 1.27
NFKB1-204ENST00000504044 FKBP4Q02790 459 aaKnown RBP eCLIP22.96■■□□□ 1.27
NFKB1-204ENST00000504044 DDX46Q7L014 1031 aaKnown RBP22.96■■□□□ 1.27
NFKB1-204ENST00000504044 C7orf43Q8WVR3 580 aa22.96■■□□□ 1.27
NFKB1-204ENST00000504044 SLC4A2P04920 1241 aa22.95■■□□□ 1.26
NFKB1-204ENST00000504044 KSR2Q6VAB6 950 aa22.95■■□□□ 1.26
NFKB1-204ENST00000504044 C16orf71Q8IYS4 520 aaPredicted RBP22.95■■□□□ 1.26
NFKB1-204ENST00000504044 CCDC191Q8NCU4 936 aa22.95■■□□□ 1.26
NFKB1-204ENST00000504044 MYD88Q99836 296 aa22.95■■□□□ 1.26
NFKB1-204ENST00000504044 PPEF1O14829 653 aaPredicted RBP22.94■■□□□ 1.26
NFKB1-204ENST00000504044 HCLS1P14317 486 aaPredicted RBP22.94■■□□□ 1.26
NFKB1-204ENST00000504044 EXOSC9Q06265 439 aaKnown RBP22.94■■□□□ 1.26
NFKB1-204ENST00000504044 METTL22Q9BUU2 404 aaPredicted RBP22.94■■□□□ 1.26
NFKB1-204ENST00000504044 ZBTB38Q8NAP3 1195 aaPredicted RBP22.93■■□□□ 1.26
NFKB1-204ENST00000504044 CWC25Q9NXE8 425 aaPredicted RBP22.93■■□□□ 1.26
NFKB1-204ENST00000504044 MAP3K2Q9Y2U5 619 aa22.93■■□□□ 1.26
NFKB1-204ENST00000504044 BBOX1O75936 387 aa22.92■■□□□ 1.26
NFKB1-204ENST00000504044 TMC4Q7Z404 712 aa22.92■■□□□ 1.26
NFKB1-204ENST00000504044 FAM89AQ96GI7 184 aa22.92■■□□□ 1.26
NFKB1-204ENST00000504044 ANKRD36CQ5JPF3 1778 aa22.91■■□□□ 1.26
NFKB1-204ENST00000504044 PI4KAP2A4QPH2 592 aa22.91■■□□□ 1.26
NFKB1-204ENST00000504044 GLTPD2A6NH11 291 aa22.91■■□□□ 1.26
NFKB1-204ENST00000504044 E9PSI1 815 aa22.91■■□□□ 1.26
NFKB1-204ENST00000504044 VAMP4O75379 141 aa22.91■■□□□ 1.26
NFKB1-204ENST00000504044 PI4KAP1Q8N8J0 262 aa22.91■■□□□ 1.26
NFKB1-204ENST00000504044 PSMD1Q99460 953 aa22.91■■□□□ 1.26
NFKB1-204ENST00000504044 ARFGEF2Q9Y6D5 1785 aa22.91■■□□□ 1.26
NFKB1-204ENST00000504044 TNRC6CQ9HCJ0 1690 aaKnown RBP22.9■■□□□ 1.26
NFKB1-204ENST00000504044 IRS4O14654 1257 aaPredicted RBP22.9■■□□□ 1.26
NFKB1-204ENST00000504044 TCERG1O14776 1098 aaKnown RBP22.9■■□□□ 1.26
NFKB1-204ENST00000504044 FLIIQ13045 1269 aa22.9■■□□□ 1.26
NFKB1-204ENST00000504044 FKBP5Q13451 457 aaPredicted RBP22.9■■□□□ 1.26
NFKB1-204ENST00000504044 DIEXFQ68CQ4 756 aaKnown RBP22.9■■□□□ 1.26
NFKB1-204ENST00000504044 SLX4Q8IY92 1834 aa22.89■■□□□ 1.26
NFKB1-204ENST00000504044 ABCC4O15439 1325 aa22.89■■□□□ 1.26
NFKB1-204ENST00000504044 GRAPQ13588 217 aa22.89■■□□□ 1.25
NFKB1-204ENST00000504044 C3orf67Q6ZVT6 689 aa22.89■■□□□ 1.25
NFKB1-204ENST00000504044 GRAPLQ8TC17 118 aaPredicted RBP22.89■■□□□ 1.25
NFKB1-204ENST00000504044 ZNF521Q96K83 1311 aa22.88■■□□□ 1.25
NFKB1-204ENST00000504044 KIF3CO14782 793 aa22.88■■□□□ 1.25
NFKB1-204ENST00000504044 PCCAP05165 728 aaPredicted RBP22.88■■□□□ 1.25
NFKB1-204ENST00000504044 SF3B3Q15393 1217 aaKnown RBP22.88■■□□□ 1.25
NFKB1-204ENST00000504044 SYNE4Q8N205 404 aa22.88■■□□□ 1.25
NFKB1-204ENST00000504044 SUPT20HQ8NEM7 779 aa22.88■■□□□ 1.25
NFKB1-204ENST00000504044 JDP2Q8WYK2 163 aa22.88■■□□□ 1.25
NFKB1-204ENST00000504044 ATP6V0A2Q9Y487 856 aa22.88■■□□□ 1.25
NFKB1-204ENST00000504044 TOMM70O94826 608 aa22.87■■□□□ 1.25
NFKB1-204ENST00000504044 RTL5Q5HYW3 569 aaPredicted RBP22.87■■□□□ 1.25
NFKB1-204ENST00000504044 NMRK2Q9NPI5 230 aa22.87■■□□□ 1.25
NFKB1-204ENST00000504044 IARSP41252 1262 aaKnown RBP22.86■■□□□ 1.25
NFKB1-204ENST00000504044 PRELPP51888 382 aa22.86■■□□□ 1.25
NFKB1-204ENST00000504044 SPINK5Q9NQ38 1064 aaPredicted RBP22.86■■□□□ 1.25
NFKB1-204ENST00000504044 ZNF277Q9NRM2 450 aaPredicted RBP22.86■■□□□ 1.25
NFKB1-204ENST00000504044 PDE8AO60658 829 aa22.85■■□□□ 1.25
NFKB1-204ENST00000504044 CCDC152Q4G0S7 254 aa22.85■■□□□ 1.25
NFKB1-204ENST00000504044 SP8Q8IXZ3 490 aa22.85■■□□□ 1.25
NFKB1-204ENST00000504044 ZNF428Q96B54 188 aa22.85■■□□□ 1.25
NFKB1-204ENST00000504044 VPS33BQ9H267 617 aa22.85■■□□□ 1.25
NFKB1-204ENST00000504044 FER1L6Q2WGJ9 1857 aa22.84■■□□□ 1.25
NFKB1-204ENST00000504044 VEGFAP15692 232 aaPredicted RBP22.84■■□□□ 1.25
NFKB1-204ENST00000504044 OLFM4Q6UX06 510 aa22.84■■□□□ 1.25
NFKB1-204ENST00000504044 DNAAF4Q8WXU2 420 aa22.84■■□□□ 1.25
NFKB1-204ENST00000504044 RRAGCQ9HB90 399 aa22.84■■□□□ 1.25
NFKB1-204ENST00000504044 DPP8Q6V1X1 898 aaPredicted RBP22.83■■□□□ 1.25
NFKB1-204ENST00000504044 G2E3Q7L622 706 aa22.83■■□□□ 1.25
NFKB1-204ENST00000504044 CDHR2Q9BYE9 1310 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms