RNA–Protein interactions for RNA: ENST00000503450.1

SCFD2-203, Transcript of sec1 family domain containing 2, humanhuman

TSL 4

Gene SCFD2, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-203ENST00000503450 LTBP3Q9NS15 1303 aa6.78□□□□□ -1.32
SCFD2-203ENST00000503450 FANCIQ9NVI1 1328 aa6.78□□□□□ -1.32
SCFD2-203ENST00000503450 LAMB2P55268 1798 aa6.78□□□□□ -1.32
SCFD2-203ENST00000503450 ELL2O00472 640 aaPredicted RBP6.78□□□□□ -1.32
SCFD2-203ENST00000503450 C21orf2O43822 256 aa6.78□□□□□ -1.32
SCFD2-203ENST00000503450 HOXA10P31260 410 aaPredicted RBP6.78□□□□□ -1.32
SCFD2-203ENST00000503450 AIMP1Q12904 312 aaKnown RBP6.78□□□□□ -1.32
SCFD2-203ENST00000503450 DIEXFQ68CQ4 756 aaKnown RBP6.78□□□□□ -1.32
SCFD2-203ENST00000503450 TPTE2Q6XPS3 522 aa6.78□□□□□ -1.32
SCFD2-203ENST00000503450 ZNF526Q8TF50 670 aaPredicted RBP6.78□□□□□ -1.32
SCFD2-203ENST00000503450 ZNF428Q96B54 188 aa6.78□□□□□ -1.32
SCFD2-203ENST00000503450 MASTLQ96GX5 879 aa6.78□□□□□ -1.32
SCFD2-203ENST00000503450 PHAXQ9H814 394 aaKnown RBP6.78□□□□□ -1.32
SCFD2-203ENST00000503450 RNF181Q9P0P0 153 aa6.78□□□□□ -1.32
SCFD2-203ENST00000503450 DDX60Q8IY21 1712 aaKnown RBP6.78□□□□□ -1.32
SCFD2-203ENST00000503450 DUOX1Q9NRD9 1551 aa6.78□□□□□ -1.32
SCFD2-203ENST00000503450 NPR1P16066 1061 aa6.77□□□□□ -1.33
SCFD2-203ENST00000503450 C1QTNF8P60827 252 aa6.77□□□□□ -1.33
SCFD2-203ENST00000503450 TCIRG1Q13488 830 aa6.77□□□□□ -1.33
SCFD2-203ENST00000503450 PARP10Q53GL7 1025 aa6.77□□□□□ -1.33
SCFD2-203ENST00000503450 SLC10A5Q5PT55 438 aa6.77□□□□□ -1.33
SCFD2-203ENST00000503450 G2E3Q7L622 706 aa6.77□□□□□ -1.33
SCFD2-203ENST00000503450 NPM2Q86SE8 214 aaKnown RBP6.77□□□□□ -1.33
SCFD2-203ENST00000503450 PLBD2Q8NHP8 589 aa6.77□□□□□ -1.33
SCFD2-203ENST00000503450 CNKSR1Q969H4 720 aa6.77□□□□□ -1.33
SCFD2-203ENST00000503450 NMRK2Q9NPI5 230 aa6.77□□□□□ -1.33
SCFD2-203ENST00000503450 ZNF219Q9P2Y4 722 aaPredicted RBP6.77□□□□□ -1.33
SCFD2-203ENST00000503450 DBF4Q9UBU7 674 aaPredicted RBP6.77□□□□□ -1.33
SCFD2-203ENST00000503450 PDZRN3Q9UPQ7 1066 aa6.77□□□□□ -1.33
SCFD2-203ENST00000503450 POTECB2RU33 542 aa6.76□□□□□ -1.33
SCFD2-203ENST00000503450 ATP5J2-PTCD1G3V325 749 aa6.76□□□□□ -1.33
SCFD2-203ENST00000503450 CCER2I3L3R5 266 aa6.76□□□□□ -1.33
SCFD2-203ENST00000503450 TCERG1O14776 1098 aaKnown RBP6.76□□□□□ -1.33
SCFD2-203ENST00000503450 LMNB1P20700 586 aa6.76□□□□□ -1.33
SCFD2-203ENST00000503450 CALD1Q05682 793 aaKnown RBP6.76□□□□□ -1.33
SCFD2-203ENST00000503450 FAM9BQ8IZU0 186 aa6.76□□□□□ -1.33
SCFD2-203ENST00000503450 NYXQ9GZU5 481 aa6.76□□□□□ -1.33
SCFD2-203ENST00000503450 HYPKQ9NX55 129 aa6.76□□□□□ -1.33
SCFD2-203ENST00000503450 SALL2Q9Y467 1007 aaPredicted RBP6.76□□□□□ -1.33
SCFD2-203ENST00000503450 ABCC4O15439 1325 aa6.76□□□□□ -1.33
SCFD2-203ENST00000503450 RNF123Q5XPI4 1314 aa6.76□□□□□ -1.33
SCFD2-203ENST00000503450 VAMP4O75379 141 aa6.75□□□□□ -1.33
SCFD2-203ENST00000503450 IGKV5-2P06315 115 aa6.75□□□□□ -1.33
SCFD2-203ENST00000503450 HCLS1P14317 486 aaPredicted RBP6.75□□□□□ -1.33
SCFD2-203ENST00000503450 TRIM28Q13263 835 aaKnown RBP6.75□□□□□ -1.33
SCFD2-203ENST00000503450 TWISTNBQ3B726 338 aaPredicted RBP6.75□□□□□ -1.33
SCFD2-203ENST00000503450 HSP90AB3PQ58FF7 597 aa6.75□□□□□ -1.33
SCFD2-203ENST00000503450 ANKRD13DQ6ZTN6 518 aa6.75□□□□□ -1.33
SCFD2-203ENST00000503450 WDR63Q8IWG1 891 aa6.75□□□□□ -1.33
SCFD2-203ENST00000503450 UTP14AQ9BVJ6 771 aaKnown RBP6.75□□□□□ -1.33
SCFD2-203ENST00000503450 TAOK3Q9H2K8 898 aa6.75□□□□□ -1.33
SCFD2-203ENST00000503450 GPBP1L1Q9HC44 474 aaPredicted RBP6.75□□□□□ -1.33
SCFD2-203ENST00000503450 DICER1Q9UPY3 1922 aaKnown RBP6.75□□□□□ -1.33
SCFD2-203ENST00000503450 LRRC37AA6NMS7 1700 aa6.75□□□□□ -1.33
SCFD2-203ENST00000503450 LTBP1Q14766 1721 aa6.75□□□□□ -1.33
SCFD2-203ENST00000503450 CCDC88AQ3V6T2 1871 aa6.75□□□□□ -1.33
SCFD2-203ENST00000503450 ZC3H4Q9UPT8 1303 aaKnown RBP6.75□□□□□ -1.33
SCFD2-203ENST00000503450 WDR90Q96KV7 1748 aa6.74□□□□□ -1.33
SCFD2-203ENST00000503450 NPHP1O15259 732 aa6.74□□□□□ -1.33
SCFD2-203ENST00000503450 FKBP4Q02790 459 aaKnown RBP eCLIP6.74□□□□□ -1.33
SCFD2-203ENST00000503450 EXOSC9Q06265 439 aaKnown RBP6.74□□□□□ -1.33
SCFD2-203ENST00000503450 CCDC93Q567U6 631 aa6.74□□□□□ -1.33
SCFD2-203ENST00000503450 PPP1R42Q7Z4L9 355 aa6.74□□□□□ -1.33
SCFD2-203ENST00000503450 FAM89AQ96GI7 184 aa6.74□□□□□ -1.33
SCFD2-203ENST00000503450 CRAMP1Q96RY5 1269 aa6.74□□□□□ -1.33
SCFD2-203ENST00000503450 ZNF277Q9NRM2 450 aaPredicted RBP6.74□□□□□ -1.33
SCFD2-203ENST00000503450 TAF1P21675 1872 aa6.74□□□□□ -1.33
SCFD2-203ENST00000503450 SH3TC1Q8TE82 1336 aa6.74□□□□□ -1.33
SCFD2-203ENST00000503450 ZNF541Q9H0D2 1346 aa6.74□□□□□ -1.33
SCFD2-203ENST00000503450 PI4KAP2A4QPH2 592 aa6.73□□□□□ -1.33
SCFD2-203ENST00000503450 GLTPD2A6NH11 291 aa6.73□□□□□ -1.33
SCFD2-203ENST00000503450 CASP7P55210 303 aa6.73□□□□□ -1.33
SCFD2-203ENST00000503450 GOLGA2Q08379 1002 aa6.73□□□□□ -1.33
SCFD2-203ENST00000503450 CCDC30Q5VVM6 783 aa6.73□□□□□ -1.33
SCFD2-203ENST00000503450 PI4KAP1Q8N8J0 262 aa6.73□□□□□ -1.33
SCFD2-203ENST00000503450 JARID2Q92833 1246 aaPredicted RBP6.73□□□□□ -1.33
SCFD2-203ENST00000503450 MYD88Q99836 296 aa6.73□□□□□ -1.33
SCFD2-203ENST00000503450 METTL22Q9BUU2 404 aaPredicted RBP6.73□□□□□ -1.33
SCFD2-203ENST00000503450 TRMT112Q9UI30 125 aaKnown RBP6.73□□□□□ -1.33
SCFD2-203ENST00000503450 PPEF1O14829 653 aaPredicted RBP6.72□□□□□ -1.33
SCFD2-203ENST00000503450 GTF2E1P29083 439 aaPredicted RBP6.72□□□□□ -1.33
SCFD2-203ENST00000503450 FLIIQ13045 1269 aa6.72□□□□□ -1.33
SCFD2-203ENST00000503450 GRAPQ13588 217 aa6.72□□□□□ -1.33
SCFD2-203ENST00000503450 SF3B3Q15393 1217 aaKnown RBP6.72□□□□□ -1.33
SCFD2-203ENST00000503450 RTL5Q5HYW3 569 aaPredicted RBP6.72□□□□□ -1.33
SCFD2-203ENST00000503450 SOGA3Q5TF21 947 aa6.72□□□□□ -1.33
SCFD2-203ENST00000503450 KSR2Q6VAB6 950 aa6.72□□□□□ -1.33
SCFD2-203ENST00000503450 MIER1Q8N108 512 aa6.72□□□□□ -1.33
SCFD2-203ENST00000503450 GRAPLQ8TC17 118 aaPredicted RBP6.72□□□□□ -1.33
SCFD2-203ENST00000503450 CELF1Q92879 486 aaKnown RBP6.72□□□□□ -1.33
SCFD2-203ENST00000503450 NLRP3Q96P20 1036 aa6.72□□□□□ -1.33
SCFD2-203ENST00000503450 PSMD1Q99460 953 aa6.72□□□□□ -1.33
SCFD2-203ENST00000503450 RTFDC1Q9BY42 306 aaPredicted RBP6.72□□□□□ -1.33
SCFD2-203ENST00000503450 MAP3K2Q9Y2U5 619 aa6.72□□□□□ -1.33
SCFD2-203ENST00000503450 ATP6V0A2Q9Y487 856 aa6.72□□□□□ -1.33
SCFD2-203ENST00000503450 NEURL1BA8MQ27 555 aa6.71□□□□□ -1.34
SCFD2-203ENST00000503450 FZD9O00144 591 aa6.71□□□□□ -1.34
SCFD2-203ENST00000503450 IRS4O14654 1257 aaPredicted RBP6.71□□□□□ -1.34
SCFD2-203ENST00000503450 DDNO94850 711 aaPredicted RBP6.71□□□□□ -1.34
SCFD2-203ENST00000503450 PCCAP05165 728 aaPredicted RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms