RNA–Protein interactions for RNA: ENST00000503420.5

CCHCR1-217, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-217ENST00000503420 TRMT112Q9UI30 125 aaKnown RBP28.4■■■□□ 2.14
CCHCR1-217ENST00000503420 RNF123Q5XPI4 1314 aa28.4■■■□□ 2.14
CCHCR1-217ENST00000503420 C1QTNF8P60827 252 aa28.39■■■□□ 2.14
CCHCR1-217ENST00000503420 RBM17Q96I25 401 aaKnown RBP28.39■■■□□ 2.14
CCHCR1-217ENST00000503420 STK31Q9BXU1 1019 aa28.39■■■□□ 2.14
CCHCR1-217ENST00000503420 COL11A2P13942 1736 aaPredicted RBP28.38■■■□□ 2.13
CCHCR1-217ENST00000503420 NFKBIEO00221 500 aa28.38■■■□□ 2.13
CCHCR1-217ENST00000503420 CRY2Q49AN0 593 aa28.38■■■□□ 2.13
CCHCR1-217ENST00000503420 TSPYL6Q8N831 410 aa28.38■■■□□ 2.13
CCHCR1-217ENST00000503420 TAOK3Q9H2K8 898 aa28.38■■■□□ 2.13
CCHCR1-217ENST00000503420 DDX58O95786 925 aaKnown RBP28.37■■■□□ 2.13
CCHCR1-217ENST00000503420 TWISTNBQ3B726 338 aaPredicted RBP28.37■■■□□ 2.13
CCHCR1-217ENST00000503420 CCDC93Q567U6 631 aa28.37■■■□□ 2.13
CCHCR1-217ENST00000503420 SLC10A5Q5PT55 438 aa28.37■■■□□ 2.13
CCHCR1-217ENST00000503420 PHAXQ9H814 394 aaKnown RBP28.36■■■□□ 2.13
CCHCR1-217ENST00000503420 KDM2BQ8NHM5 1336 aa28.36■■■□□ 2.13
CCHCR1-217ENST00000503420 SH3TC1Q8TE82 1336 aa28.36■■■□□ 2.13
CCHCR1-217ENST00000503420 ZC3H4Q9UPT8 1303 aaKnown RBP28.36■■■□□ 2.13
CCHCR1-217ENST00000503420 RIC1Q4ADV7 1423 aa28.35■■■□□ 2.13
CCHCR1-217ENST00000503420 ATP5J2-PTCD1G3V325 749 aa28.34■■■□□ 2.13
CCHCR1-217ENST00000503420 HOXA10P31260 410 aaPredicted RBP28.34■■■□□ 2.13
CCHCR1-217ENST00000503420 RTKN2Q8IZC4 609 aa28.34■■■□□ 2.13
CCHCR1-217ENST00000503420 C7orf43Q8WVR3 580 aa28.34■■■□□ 2.13
CCHCR1-217ENST00000503420 TMX4Q9H1E5 349 aaPredicted RBP28.34■■■□□ 2.13
CCHCR1-217ENST00000503420 SLX4Q8IY92 1834 aa28.34■■■□□ 2.13
CCHCR1-217ENST00000503420 CRAMP1Q96RY5 1269 aa28.33■■■□□ 2.13
CCHCR1-217ENST00000503420 ISCA1Q9BUE6 129 aa28.33■■■□□ 2.13
CCHCR1-217ENST00000503420 MYH16Q9H6N6 1097 aa28.33■■■□□ 2.13
CCHCR1-217ENST00000503420 LTBP3Q9NS15 1303 aa28.33■■■□□ 2.13
CCHCR1-217ENST00000503420 FANCIQ9NVI1 1328 aa28.32■■■□□ 2.12
CCHCR1-217ENST00000503420 HCLS1P14317 486 aaPredicted RBP28.31■■■□□ 2.12
CCHCR1-217ENST00000503420 CC2D2BQ6DHV5 1058 aa28.31■■■□□ 2.12
CCHCR1-217ENST00000503420 TCERG1O14776 1098 aaKnown RBP28.3■■■□□ 2.12
CCHCR1-217ENST00000503420 PRELPP51888 382 aa28.3■■■□□ 2.12
CCHCR1-217ENST00000503420 TRIM28Q13263 835 aaKnown RBP28.3■■■□□ 2.12
CCHCR1-217ENST00000503420 ZNF428Q96B54 188 aa28.3■■■□□ 2.12
CCHCR1-217ENST00000503420 DPY19L2Q6NUT2 758 aa28.29■■■□□ 2.12
CCHCR1-217ENST00000503420 C3orf67Q6ZVT6 689 aa28.29■■■□□ 2.12
CCHCR1-217ENST00000503420 SBF1O95248 1867 aa28.29■■■□□ 2.12
CCHCR1-217ENST00000503420 SLC4A2P04920 1241 aa28.28■■■□□ 2.12
CCHCR1-217ENST00000503420 FKBP4Q02790 459 aaKnown RBP eCLIP28.28■■■□□ 2.12
CCHCR1-217ENST00000503420 GRIPAP1Q4V328 841 aa28.28■■■□□ 2.12
CCHCR1-217ENST00000503420 C16orf71Q8IYS4 520 aaPredicted RBP28.28■■■□□ 2.12
CCHCR1-217ENST00000503420 SYNE4Q8N205 404 aa28.28■■■□□ 2.12
CCHCR1-217ENST00000503420 MYD88Q99836 296 aa28.28■■■□□ 2.12
CCHCR1-217ENST00000503420 PPEF1O14829 653 aaPredicted RBP28.27■■■□□ 2.12
CCHCR1-217ENST00000503420 HSP90B1P14625 803 aaKnown RBP28.27■■■□□ 2.12
CCHCR1-217ENST00000503420 EXOSC9Q06265 439 aaKnown RBP28.27■■■□□ 2.12
CCHCR1-217ENST00000503420 DDX46Q7L014 1031 aaKnown RBP28.27■■■□□ 2.12
CCHCR1-217ENST00000503420 FAM89AQ96GI7 184 aa28.27■■■□□ 2.12
CCHCR1-217ENST00000503420 NMRK2Q9NPI5 230 aa28.27■■■□□ 2.12
CCHCR1-217ENST00000503420 CACNA1SQ13698 1873 aa28.26■■■□□ 2.11
CCHCR1-217ENST00000503420 CCER2I3L3R5 266 aa28.26■■■□□ 2.11
CCHCR1-217ENST00000503420 KIF3CO14782 793 aa28.26■■■□□ 2.11
CCHCR1-217ENST00000503420 OLFM4Q6UX06 510 aa28.26■■■□□ 2.11
CCHCR1-217ENST00000503420 ANKRD36CQ5JPF3 1778 aa28.26■■■□□ 2.11
CCHCR1-217ENST00000503420 TNRC6CQ9HCJ0 1690 aaKnown RBP28.26■■■□□ 2.11
CCHCR1-217ENST00000503420 GLTPD2A6NH11 291 aa28.25■■■□□ 2.11
CCHCR1-217ENST00000503420 KSR2Q6VAB6 950 aa28.25■■■□□ 2.11
CCHCR1-217ENST00000503420 METTL22Q9BUU2 404 aaPredicted RBP28.25■■■□□ 2.11
CCHCR1-217ENST00000503420 MAP3K2Q9Y2U5 619 aa28.25■■■□□ 2.11
CCHCR1-217ENST00000503420 ARFGEF2Q9Y6D5 1785 aa28.24■■■□□ 2.11
CCHCR1-217ENST00000503420 BBOX1O75936 387 aa28.24■■■□□ 2.11
CCHCR1-217ENST00000503420 NEXNQ0ZGT2 675 aa28.24■■■□□ 2.11
CCHCR1-217ENST00000503420 RTL5Q5HYW3 569 aaPredicted RBP28.24■■■□□ 2.11
CCHCR1-217ENST00000503420 CCDC191Q8NCU4 936 aa28.24■■■□□ 2.11
CCHCR1-217ENST00000503420 RRAGCQ9HB90 399 aa28.24■■■□□ 2.11
CCHCR1-217ENST00000503420 FER1L6Q2WGJ9 1857 aa28.23■■■□□ 2.11
CCHCR1-217ENST00000503420 PI4KAP2A4QPH2 592 aa28.23■■■□□ 2.11
CCHCR1-217ENST00000503420 VAMP4O75379 141 aa28.23■■■□□ 2.11
CCHCR1-217ENST00000503420 PI4KAP1Q8N8J0 262 aa28.23■■■□□ 2.11
CCHCR1-217ENST00000503420 ZNF277Q9NRM2 450 aaPredicted RBP28.23■■■□□ 2.11
CCHCR1-217ENST00000503420 CWC25Q9NXE8 425 aaPredicted RBP28.23■■■□□ 2.11
CCHCR1-217ENST00000503420 IRS4O14654 1257 aaPredicted RBP28.22■■■□□ 2.11
CCHCR1-217ENST00000503420 ZBTB38Q8NAP3 1195 aaPredicted RBP28.22■■■□□ 2.11
CCHCR1-217ENST00000503420 TOMM70O94826 608 aa28.21■■■□□ 2.11
CCHCR1-217ENST00000503420 PSMD1Q99460 953 aa28.21■■■□□ 2.11
CCHCR1-217ENST00000503420 SPINK5Q9NQ38 1064 aaPredicted RBP28.21■■■□□ 2.11
CCHCR1-217ENST00000503420 ABCC4O15439 1325 aa28.2■■■□□ 2.11
CCHCR1-217ENST00000503420 ATP6V0A2Q9Y487 856 aa28.2■■■□□ 2.1
CCHCR1-217ENST00000503420 CCDC88AQ3V6T2 1871 aa28.2■■■□□ 2.1
CCHCR1-217ENST00000503420 VEGFAP15692 232 aaPredicted RBP28.18■■■□□ 2.1
CCHCR1-217ENST00000503420 IARSP41252 1262 aaKnown RBP28.18■■■□□ 2.1
CCHCR1-217ENST00000503420 FLIIQ13045 1269 aa28.18■■■□□ 2.1
CCHCR1-217ENST00000503420 FKBP5Q13451 457 aaPredicted RBP28.18■■■□□ 2.1
CCHCR1-217ENST00000503420 GRAPQ13588 217 aa28.18■■■□□ 2.1
CCHCR1-217ENST00000503420 G2E3Q7L622 706 aa28.18■■■□□ 2.1
CCHCR1-217ENST00000503420 GRAPLQ8TC17 118 aaPredicted RBP28.18■■■□□ 2.1
CCHCR1-217ENST00000503420 PCCAP05165 728 aaPredicted RBP28.17■■■□□ 2.1
CCHCR1-217ENST00000503420 SF3B3Q15393 1217 aaKnown RBP28.17■■■□□ 2.1
CCHCR1-217ENST00000503420 TMC4Q7Z404 712 aa28.17■■■□□ 2.1
CCHCR1-217ENST00000503420 SP8Q8IXZ3 490 aa28.17■■■□□ 2.1
CCHCR1-217ENST00000503420 JDP2Q8WYK2 163 aa28.17■■■□□ 2.1
CCHCR1-217ENST00000503420 ZNF521Q96K83 1311 aa28.15■■■□□ 2.1
CCHCR1-217ENST00000503420 SUPT20HQ8NEM7 779 aa28.14■■■□□ 2.1
CCHCR1-217ENST00000503420 E9PSI1 815 aa28.13■■■□□ 2.09
CCHCR1-217ENST00000503420 LARGE2Q8N3Y3 721 aa28.13■■■□□ 2.09
CCHCR1-217ENST00000503420 RBM46Q8TBY0 533 aaKnown RBP28.13■■■□□ 2.09
CCHCR1-217ENST00000503420 PDE8AO60658 829 aa28.12■■■□□ 2.09
CCHCR1-217ENST00000503420 DIEXFQ68CQ4 756 aaKnown RBP28.12■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms