RNA–Protein interactions for RNA: ENST00000503121.5

SYNE4-206, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-206ENST00000503121 TRMT112Q9UI30 125 aaKnown RBP15.51■□□□□ 0.07
SYNE4-206ENST00000503121 COL11A2P13942 1736 aaPredicted RBP15.51■□□□□ 0.07
SYNE4-206ENST00000503121 NFKBIEO00221 500 aa15.5■□□□□ 0.07
SYNE4-206ENST00000503121 GOLGA2Q08379 1002 aa15.5■□□□□ 0.07
SYNE4-206ENST00000503121 CRY2Q49AN0 593 aa15.5■□□□□ 0.07
SYNE4-206ENST00000503121 ZNF428Q96B54 188 aa15.5■□□□□ 0.07
SYNE4-206ENST00000503121 NLRP3Q96P20 1036 aa15.5■□□□□ 0.07
SYNE4-206ENST00000503121 ATP5J2-PTCD1G3V325 749 aa15.49■□□□□ 0.07
SYNE4-206ENST00000503121 TWISTNBQ3B726 338 aaPredicted RBP15.49■□□□□ 0.07
SYNE4-206ENST00000503121 STK31Q9BXU1 1019 aa15.49■□□□□ 0.07
SYNE4-206ENST00000503121 TAOK3Q9H2K8 898 aa15.49■□□□□ 0.07
SYNE4-206ENST00000503121 TCERG1O14776 1098 aaKnown RBP15.48■□□□□ 0.07
SYNE4-206ENST00000503121 C1QTNF8P60827 252 aa15.48■□□□□ 0.07
SYNE4-206ENST00000503121 CCDC93Q567U6 631 aa15.48■□□□□ 0.07
SYNE4-206ENST00000503121 SLC10A5Q5PT55 438 aa15.48■□□□□ 0.07
SYNE4-206ENST00000503121 C7orf43Q8WVR3 580 aa15.48■□□□□ 0.07
SYNE4-206ENST00000503121 RBM17Q96I25 401 aaKnown RBP15.48■□□□□ 0.07
SYNE4-206ENST00000503121 SLX4Q8IY92 1834 aa15.47■□□□□ 0.07
SYNE4-206ENST00000503121 RNF123Q5XPI4 1314 aa15.47■□□□□ 0.07
SYNE4-206ENST00000503121 SH3TC1Q8TE82 1336 aa15.47■□□□□ 0.07
SYNE4-206ENST00000503121 FANCIQ9NVI1 1328 aa15.47■□□□□ 0.07
SYNE4-206ENST00000503121 DDX58O95786 925 aaKnown RBP15.47■□□□□ 0.07
SYNE4-206ENST00000503121 HCLS1P14317 486 aaPredicted RBP15.47■□□□□ 0.07
SYNE4-206ENST00000503121 PRELPP51888 382 aa15.47■□□□□ 0.07
SYNE4-206ENST00000503121 C3orf67Q6ZVT6 689 aa15.47■□□□□ 0.07
SYNE4-206ENST00000503121 SYNE4Q8N205 404 aa15.47■□□□□ 0.07
SYNE4-206ENST00000503121 ISCA1Q9BUE6 129 aa15.47■□□□□ 0.07
SYNE4-206ENST00000503121 KDM2BQ8NHM5 1336 aa15.46■□□□□ 0.07
SYNE4-206ENST00000503121 RIC1Q4ADV7 1423 aa15.46■□□□□ 0.07
SYNE4-206ENST00000503121 HOXA10P31260 410 aaPredicted RBP15.46■□□□□ 0.07
SYNE4-206ENST00000503121 OLFM4Q6UX06 510 aa15.46■□□□□ 0.07
SYNE4-206ENST00000503121 SLC4A2P04920 1241 aa15.45■□□□□ 0.06
SYNE4-206ENST00000503121 EXOSC9Q06265 439 aaKnown RBP15.45■□□□□ 0.06
SYNE4-206ENST00000503121 RTKN2Q8IZC4 609 aa15.45■□□□□ 0.06
SYNE4-206ENST00000503121 FAM89AQ96GI7 184 aa15.45■□□□□ 0.06
SYNE4-206ENST00000503121 CRAMP1Q96RY5 1269 aa15.45■□□□□ 0.06
SYNE4-206ENST00000503121 MYD88Q99836 296 aa15.45■□□□□ 0.06
SYNE4-206ENST00000503121 MYH16Q9H6N6 1097 aa15.45■□□□□ 0.06
SYNE4-206ENST00000503121 NMRK2Q9NPI5 230 aa15.45■□□□□ 0.06
SYNE4-206ENST00000503121 SBF1O95248 1867 aa15.45■□□□□ 0.06
SYNE4-206ENST00000503121 TNRC6CQ9HCJ0 1690 aaKnown RBP15.44■□□□□ 0.06
SYNE4-206ENST00000503121 LTBP3Q9NS15 1303 aa15.44■□□□□ 0.06
SYNE4-206ENST00000503121 ZC3H4Q9UPT8 1303 aaKnown RBP15.44■□□□□ 0.06
SYNE4-206ENST00000503121 CACNA1SQ13698 1873 aa15.44■□□□□ 0.06
SYNE4-206ENST00000503121 TRIM28Q13263 835 aaKnown RBP15.44■□□□□ 0.06
SYNE4-206ENST00000503121 RTL5Q5HYW3 569 aaPredicted RBP15.44■□□□□ 0.06
SYNE4-206ENST00000503121 TMX4Q9H1E5 349 aaPredicted RBP15.44■□□□□ 0.06
SYNE4-206ENST00000503121 SPINK5Q9NQ38 1064 aaPredicted RBP15.44■□□□□ 0.06
SYNE4-206ENST00000503121 KIF3CO14782 793 aa15.43■□□□□ 0.06
SYNE4-206ENST00000503121 PPEF1O14829 653 aaPredicted RBP15.43■□□□□ 0.06
SYNE4-206ENST00000503121 FKBP4Q02790 459 aaKnown RBP eCLIP15.43■□□□□ 0.06
SYNE4-206ENST00000503121 CC2D2BQ6DHV5 1058 aa15.43■□□□□ 0.06
SYNE4-206ENST00000503121 KSR2Q6VAB6 950 aa15.43■□□□□ 0.06
SYNE4-206ENST00000503121 MAP3K2Q9Y2U5 619 aa15.43■□□□□ 0.06
SYNE4-206ENST00000503121 ANKRD36CQ5JPF3 1778 aa15.42■□□□□ 0.06
SYNE4-206ENST00000503121 PI4KAP2A4QPH2 592 aa15.42■□□□□ 0.06
SYNE4-206ENST00000503121 CCER2I3L3R5 266 aa15.42■□□□□ 0.06
SYNE4-206ENST00000503121 VAMP4O75379 141 aa15.42■□□□□ 0.06
SYNE4-206ENST00000503121 DPY19L2Q6NUT2 758 aa15.42■□□□□ 0.06
SYNE4-206ENST00000503121 DDX46Q7L014 1031 aaKnown RBP15.42■□□□□ 0.06
SYNE4-206ENST00000503121 C16orf71Q8IYS4 520 aaPredicted RBP15.42■□□□□ 0.06
SYNE4-206ENST00000503121 PI4KAP1Q8N8J0 262 aa15.42■□□□□ 0.06
SYNE4-206ENST00000503121 METTL22Q9BUU2 404 aaPredicted RBP15.42■□□□□ 0.06
SYNE4-206ENST00000503121 RRAGCQ9HB90 399 aa15.42■□□□□ 0.06
SYNE4-206ENST00000503121 ZNF277Q9NRM2 450 aaPredicted RBP15.42■□□□□ 0.06
SYNE4-206ENST00000503121 FER1L6Q2WGJ9 1857 aa15.42■□□□□ 0.06
SYNE4-206ENST00000503121 ARFGEF2Q9Y6D5 1785 aa15.41■□□□□ 0.06
SYNE4-206ENST00000503121 GLTPD2A6NH11 291 aa15.41■□□□□ 0.06
SYNE4-206ENST00000503121 G2E3Q7L622 706 aa15.41■□□□□ 0.06
SYNE4-206ENST00000503121 CCDC191Q8NCU4 936 aa15.41■□□□□ 0.06
SYNE4-206ENST00000503121 CWC25Q9NXE8 425 aaPredicted RBP15.41■□□□□ 0.06
SYNE4-206ENST00000503121 ABCC4O15439 1325 aa15.41■□□□□ 0.06
SYNE4-206ENST00000503121 CCDC88AQ3V6T2 1871 aa15.4■□□□□ 0.06
SYNE4-206ENST00000503121 IRS4O14654 1257 aaPredicted RBP15.4■□□□□ 0.06
SYNE4-206ENST00000503121 BBOX1O75936 387 aa15.4■□□□□ 0.06
SYNE4-206ENST00000503121 NEXNQ0ZGT2 675 aa15.4■□□□□ 0.06
SYNE4-206ENST00000503121 GRIPAP1Q4V328 841 aa15.4■□□□□ 0.06
SYNE4-206ENST00000503121 ZBTB38Q8NAP3 1195 aaPredicted RBP15.4■□□□□ 0.06
SYNE4-206ENST00000503121 TOMM70O94826 608 aa15.39■□□□□ 0.05
SYNE4-206ENST00000503121 HSP90B1P14625 803 aaKnown RBP15.39■□□□□ 0.05
SYNE4-206ENST00000503121 FLIIQ13045 1269 aa15.39■□□□□ 0.05
SYNE4-206ENST00000503121 FKBP5Q13451 457 aaPredicted RBP15.39■□□□□ 0.05
SYNE4-206ENST00000503121 ATP6V0A2Q9Y487 856 aa15.39■□□□□ 0.05
SYNE4-206ENST00000503121 PCCAP05165 728 aaPredicted RBP15.38■□□□□ 0.05
SYNE4-206ENST00000503121 IARSP41252 1262 aaKnown RBP15.38■□□□□ 0.05
SYNE4-206ENST00000503121 GRAPQ13588 217 aa15.38■□□□□ 0.05
SYNE4-206ENST00000503121 SF3B3Q15393 1217 aaKnown RBP15.38■□□□□ 0.05
SYNE4-206ENST00000503121 GRAPLQ8TC17 118 aaPredicted RBP15.38■□□□□ 0.05
SYNE4-206ENST00000503121 JARID2Q92833 1246 aaPredicted RBP15.38■□□□□ 0.05
SYNE4-206ENST00000503121 PSMD1Q99460 953 aa15.38■□□□□ 0.05
SYNE4-206ENST00000503121 ZNF521Q96K83 1311 aa15.38■□□□□ 0.05
SYNE4-206ENST00000503121 VEGFAP15692 232 aaPredicted RBP15.37■□□□□ 0.05
SYNE4-206ENST00000503121 DIEXFQ68CQ4 756 aaKnown RBP15.37■□□□□ 0.05
SYNE4-206ENST00000503121 SLC51AQ86UW1 340 aa15.37■□□□□ 0.05
SYNE4-206ENST00000503121 SP8Q8IXZ3 490 aa15.37■□□□□ 0.05
SYNE4-206ENST00000503121 JDP2Q8WYK2 163 aa15.37■□□□□ 0.05
SYNE4-206ENST00000503121 DDNO94850 711 aaPredicted RBP15.36■□□□□ 0.05
SYNE4-206ENST00000503121 IGKV5-2P06315 115 aa15.36■□□□□ 0.05
SYNE4-206ENST00000503121 E9PSI1 815 aa15.35■□□□□ 0.05
SYNE4-206ENST00000503121 CWF19L2Q2TBE0 894 aaKnown RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms