RNA–Protein interactions for RNA: ENST00000503078.5

DDX41-202, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-202ENST00000503078 KCNJ4P48050 445 aa29.18■■■□□ 2.26
DDX41-202ENST00000503078 KIAA1524Q8TCG1 905 aa29.18■■■□□ 2.26
DDX41-202ENST00000503078 ADAMTSL3P82987 1691 aa29.17■■■□□ 2.26
DDX41-202ENST00000503078 PSMA5P28066 241 aa29.17■■■□□ 2.26
DDX41-202ENST00000503078 TTC6Q86TZ1 520 aa29.17■■■□□ 2.26
DDX41-202ENST00000503078 ELP1O95163 1332 aa29.17■■■□□ 2.26
DDX41-202ENST00000503078 LMO7Q8WWI1 1683 aa29.16■■■□□ 2.26
DDX41-202ENST00000503078 AKAP4Q5JQC9 854 aa29.16■■■□□ 2.26
DDX41-202ENST00000503078 FAM227BQ96M60 508 aa29.16■■■□□ 2.26
DDX41-202ENST00000503078 KCNF1Q9H3M0 494 aa29.16■■■□□ 2.26
DDX41-202ENST00000503078 NMIQ13287 307 aaPredicted RBP29.16■■■□□ 2.26
DDX41-202ENST00000503078 KSR2Q6VAB6 950 aa29.16■■■□□ 2.26
DDX41-202ENST00000503078 GOLGA6L6A8MZA4 724 aa29.15■■■□□ 2.26
DDX41-202ENST00000503078 PDCP20941 246 aa29.15■■■□□ 2.26
DDX41-202ENST00000503078 JARID2Q92833 1246 aaPredicted RBP29.15■■■□□ 2.26
DDX41-202ENST00000503078 ARID3AQ99856 593 aa29.15■■■□□ 2.26
DDX41-202ENST00000503078 CCDC94Q9BW85 323 aaPredicted RBP29.15■■■□□ 2.26
DDX41-202ENST00000503078 SNRKQ9NRH2 765 aa29.15■■■□□ 2.26
DDX41-202ENST00000503078 SLC27A2O14975 620 aa29.15■■■□□ 2.26
DDX41-202ENST00000503078 CDC37L1Q7L3B6 337 aa29.15■■■□□ 2.26
DDX41-202ENST00000503078 FAM200AQ8TCP9 573 aa29.15■■■□□ 2.26
DDX41-202ENST00000503078 MAP3K11Q16584 847 aa29.14■■■□□ 2.26
DDX41-202ENST00000503078 NUP62CLQ9H1M0 184 aa29.14■■■□□ 2.26
DDX41-202ENST00000503078 ZNF530Q6P9A1 599 aaPredicted RBP29.13■■■□□ 2.25
DDX41-202ENST00000503078 ZNF710Q8N1W2 664 aa29.13■■■□□ 2.25
DDX41-202ENST00000503078 KIF3AQ9Y496 699 aa29.13■■■□□ 2.25
DDX41-202ENST00000503078 PYCARDQ9ULZ3 195 aa29.13■■■□□ 2.25
DDX41-202ENST00000503078 ANKRD1Q15327 319 aa29.12■■■□□ 2.25
DDX41-202ENST00000503078 CWF19L2Q2TBE0 894 aaKnown RBP29.12■■■□□ 2.25
DDX41-202ENST00000503078 MPRIPQ6WCQ1 1025 aa29.12■■■□□ 2.25
DDX41-202ENST00000503078 TSC1Q92574 1164 aa29.12■■■□□ 2.25
DDX41-202ENST00000503078 FERMT3Q86UX7 667 aa29.12■■■□□ 2.25
DDX41-202ENST00000503078 SPC24Q8NBT2 197 aa29.12■■■□□ 2.25
DDX41-202ENST00000503078 SASH1O94885 1247 aa29.11■■■□□ 2.25
DDX41-202ENST00000503078 RNF20Q5VTR2 975 aa29.11■■■□□ 2.25
DDX41-202ENST00000503078 EAF2Q96CJ1 260 aaPredicted RBP29.11■■■□□ 2.25
DDX41-202ENST00000503078 LIG1P18858 919 aa29.11■■■□□ 2.25
DDX41-202ENST00000503078 PROSER3Q2NL68 480 aa29.11■■■□□ 2.25
DDX41-202ENST00000503078 BLOC1S2Q6QNY1 142 aa29.11■■■□□ 2.25
DDX41-202ENST00000503078 SMAP1Q8IYB5 467 aaPredicted RBP29.11■■■□□ 2.25
DDX41-202ENST00000503078 MRVI1Q9Y6F6 885 aa29.11■■■□□ 2.25
DDX41-202ENST00000503078 NFAT5O94916 1531 aa29.11■■■□□ 2.25
DDX41-202ENST00000503078 G3BP1Q13283 466 aaKnown RBP eCLIP29.1■■■□□ 2.25
DDX41-202ENST00000503078 PLEKHO1Q53GL0 409 aaPredicted RBP29.1■■■□□ 2.25
DDX41-202ENST00000503078 ALDH8A1Q9H2A2 487 aaPredicted RBP29.1■■■□□ 2.25
DDX41-202ENST00000503078 ADGRL3Q9HAR2 1447 aa29.1■■■□□ 2.25
DDX41-202ENST00000503078 SETD1BQ9UPS6 1966 aaKnown RBP29.1■■■□□ 2.25
DDX41-202ENST00000503078 TYRO3Q06418 890 aa29.1■■■□□ 2.25
DDX41-202ENST00000503078 GIGYF1O75420 1035 aaPredicted RBP29.09■■■□□ 2.25
DDX41-202ENST00000503078 COL9A3Q14050 684 aaPredicted RBP29.09■■■□□ 2.25
DDX41-202ENST00000503078 FAM173BQ6P4H8 233 aa29.09■■■□□ 2.25
DDX41-202ENST00000503078 CHMP3Q9Y3E7 222 aa29.09■■■□□ 2.25
DDX41-202ENST00000503078 SUCLG2Q96I99 432 aa29.09■■■□□ 2.25
DDX41-202ENST00000503078 SCAND2PQ9GZW5 306 aaPredicted RBP29.09■■■□□ 2.25
DDX41-202ENST00000503078 CCDC8Q9H0W5 538 aaPredicted RBP29.09■■■□□ 2.25
DDX41-202ENST00000503078 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP29.09■■■□□ 2.25
DDX41-202ENST00000503078 NPHP4O75161 1426 aaPredicted RBP29.08■■■□□ 2.25
DDX41-202ENST00000503078 A0A0D9SFI3 127 aa29.08■■■□□ 2.25
DDX41-202ENST00000503078 GRM8O00222 908 aa29.08■■■□□ 2.25
DDX41-202ENST00000503078 RPS6KB1P23443 525 aa29.08■■■□□ 2.25
DDX41-202ENST00000503078 LINS1Q8NG48 757 aa29.08■■■□□ 2.25
DDX41-202ENST00000503078 RNMTO43148 476 aaKnown RBP29.08■■■□□ 2.25
DDX41-202ENST00000503078 CAMK4Q16566 473 aa29.08■■■□□ 2.25
DDX41-202ENST00000503078 KAZALD1Q96I82 304 aa29.08■■■□□ 2.25
DDX41-202ENST00000503078 PHF8Q9UPP1 1060 aa29.08■■■□□ 2.25
DDX41-202ENST00000503078 UTYO14607 1347 aa29.07■■■□□ 2.24
DDX41-202ENST00000503078 FSD1Q9BTV5 496 aa29.07■■■□□ 2.24
DDX41-202ENST00000503078 RGPD2P0DJD1 1756 aa29.07■■■□□ 2.24
DDX41-202ENST00000503078 CHAF1AQ13111 956 aaPredicted RBP29.06■■■□□ 2.24
DDX41-202ENST00000503078 TNMDQ9H2S6 317 aa29.06■■■□□ 2.24
DDX41-202ENST00000503078 BICC1Q9H694 974 aaKnown RBP29.06■■■□□ 2.24
DDX41-202ENST00000503078 HEG1Q9ULI3 1381 aa29.06■■■□□ 2.24
DDX41-202ENST00000503078 MED23Q9ULK4 1368 aa29.06■■■□□ 2.24
DDX41-202ENST00000503078 NCAPD2Q15021 1401 aa29.06■■■□□ 2.24
DDX41-202ENST00000503078 AMOTQ4VCS5 1084 aa29.06■■■□□ 2.24
DDX41-202ENST00000503078 TOB2Q14106 344 aaPredicted RBP29.05■■■□□ 2.24
DDX41-202ENST00000503078 SPATA32Q96LK8 384 aa29.05■■■□□ 2.24
DDX41-202ENST00000503078 TCEANC2Q96MN5 208 aa29.05■■■□□ 2.24
DDX41-202ENST00000503078 DACT1Q9NYF0 836 aa29.05■■■□□ 2.24
DDX41-202ENST00000503078 NPHP3Q7Z494 1330 aa29.05■■■□□ 2.24
DDX41-202ENST00000503078 GOLGA6L4A6NEF3 574 aa29.05■■■□□ 2.24
DDX41-202ENST00000503078 LRRC59Q96AG4 307 aaKnown RBP29.05■■■□□ 2.24
DDX41-202ENST00000503078 BOLA2Q9H3K6 86 aa29.05■■■□□ 2.24
DDX41-202ENST00000503078 TLR7Q9NYK1 1049 aaKnown RBP29.05■■■□□ 2.24
DDX41-202ENST00000503078 LUZP1Q86V48 1076 aa29.04■■■□□ 2.24
DDX41-202ENST00000503078 DDX19AQ9NUU7 478 aaKnown RBP29.04■■■□□ 2.24
DDX41-202ENST00000503078 C1orf141Q5JVX7 400 aa29.04■■■□□ 2.24
DDX41-202ENST00000503078 LARP1Q6PKG0 1096 aaKnown RBP29.04■■■□□ 2.24
DDX41-202ENST00000503078 BCL2L12Q9HB09 334 aa29.04■■■□□ 2.24
DDX41-202ENST00000503078 HMG20BQ9P0W2 317 aa29.04■■■□□ 2.24
DDX41-202ENST00000503078 OVOS2A0A0G2JMS6 1433 aa29.04■■■□□ 2.24
DDX41-202ENST00000503078 PRDM4Q9UKN5 801 aa29.03■■■□□ 2.24
DDX41-202ENST00000503078 JCADQ9P266 1359 aa29.03■■■□□ 2.24
DDX41-202ENST00000503078 TSGA10IPQ3SY00 556 aa29.03■■■□□ 2.24
DDX41-202ENST00000503078 RBM43Q6ZSC3 357 aaKnown RBP29.03■■■□□ 2.24
DDX41-202ENST00000503078 CKAP2LQ8IYA6 745 aa29.03■■■□□ 2.24
DDX41-202ENST00000503078 TAF6LQ9Y6J9 622 aa29.03■■■□□ 2.24
DDX41-202ENST00000503078 PTGS1P23219 599 aa29.02■■■□□ 2.24
DDX41-202ENST00000503078 ANO6Q4KMQ2 910 aa29.02■■■□□ 2.24
DDX41-202ENST00000503078 KCNH5Q8NCM2 988 aa29.02■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms