RNA–Protein interactions for RNA: ENST00000502443.1

USP46-203, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-203ENST00000502443 IBTKQ9P2D0 1353 aaPredicted RBP9.35□□□□□ -0.91
USP46-203ENST00000502443 NTSR2O95665 410 aa9.34□□□□□ -0.91
USP46-203ENST00000502443 SRGNP10124 158 aa9.34□□□□□ -0.91
USP46-203ENST00000502443 FLIIQ13045 1269 aa9.34□□□□□ -0.91
USP46-203ENST00000502443 FKBP5Q13451 457 aaPredicted RBP9.34□□□□□ -0.91
USP46-203ENST00000502443 TRMT2AQ8IZ69 625 aaKnown RBP9.34□□□□□ -0.91
USP46-203ENST00000502443 TTLL6Q8N841 843 aa9.34□□□□□ -0.91
USP46-203ENST00000502443 MYD88Q99836 296 aa9.34□□□□□ -0.91
USP46-203ENST00000502443 ISCA1Q9BUE6 129 aa9.34□□□□□ -0.91
USP46-203ENST00000502443 METTL22Q9BUU2 404 aaPredicted RBP9.34□□□□□ -0.91
USP46-203ENST00000502443 DLEC1Q9Y238 1755 aa9.34□□□□□ -0.91
USP46-203ENST00000502443 ABCC12Q96J65 1359 aa9.34□□□□□ -0.91
USP46-203ENST00000502443 COL11A2P13942 1736 aaPredicted RBP9.34□□□□□ -0.92
USP46-203ENST00000502443 CHD4Q14839 1912 aa9.33□□□□□ -0.92
USP46-203ENST00000502443 NPR1P16066 1061 aa9.33□□□□□ -0.92
USP46-203ENST00000502443 NEXNQ0ZGT2 675 aa9.33□□□□□ -0.92
USP46-203ENST00000502443 RTL5Q5HYW3 569 aaPredicted RBP9.33□□□□□ -0.92
USP46-203ENST00000502443 STYK1Q6J9G0 422 aa9.33□□□□□ -0.92
USP46-203ENST00000502443 SYNE4Q8N205 404 aa9.33□□□□□ -0.92
USP46-203ENST00000502443 MASTLQ96GX5 879 aa9.33□□□□□ -0.92
USP46-203ENST00000502443 ADCY9O60503 1353 aa9.33□□□□□ -0.92
USP46-203ENST00000502443 ARFGEF1Q9Y6D6 1849 aa9.33□□□□□ -0.92
USP46-203ENST00000502443 RNF123Q5XPI4 1314 aa9.32□□□□□ -0.92
USP46-203ENST00000502443 SH3TC1Q8TE82 1336 aa9.32□□□□□ -0.92
USP46-203ENST00000502443 CACNA1SQ13698 1873 aa9.32□□□□□ -0.92
USP46-203ENST00000502443 KLRG2A4D1S0 409 aaPredicted RBP9.32□□□□□ -0.92
USP46-203ENST00000502443 HCLS1P14317 486 aaPredicted RBP9.32□□□□□ -0.92
USP46-203ENST00000502443 TRIM28Q13263 835 aaKnown RBP9.32□□□□□ -0.92
USP46-203ENST00000502443 SLC10A5Q5PT55 438 aa9.32□□□□□ -0.92
USP46-203ENST00000502443 ARHGAP27Q6ZUM4 889 aa9.32□□□□□ -0.92
USP46-203ENST00000502443 RPGRQ92834 1020 aaKnown RBP9.32□□□□□ -0.92
USP46-203ENST00000502443 CNKSR1Q969H4 720 aa9.32□□□□□ -0.92
USP46-203ENST00000502443 FAM89AQ96GI7 184 aa9.32□□□□□ -0.92
USP46-203ENST00000502443 NLRP3Q96P20 1036 aa9.32□□□□□ -0.92
USP46-203ENST00000502443 TNRC6CQ9HCJ0 1690 aaKnown RBP9.32□□□□□ -0.92
USP46-203ENST00000502443 UTRNP46939 3433 aa9.31□□□□□ -0.92
USP46-203ENST00000502443 CT47B1P0C2W7 299 aaPredicted RBP9.31□□□□□ -0.92
USP46-203ENST00000502443 YY1P25490 414 aa9.31□□□□□ -0.92
USP46-203ENST00000502443 CWF19L2Q2TBE0 894 aaKnown RBP9.31□□□□□ -0.92
USP46-203ENST00000502443 CRY2Q49AN0 593 aa9.31□□□□□ -0.92
USP46-203ENST00000502443 PRPF40BQ6NWY9 871 aaKnown RBP9.31□□□□□ -0.92
USP46-203ENST00000502443 C3orf67Q6ZVT6 689 aa9.31□□□□□ -0.92
USP46-203ENST00000502443 CCDC191Q8NCU4 936 aa9.31□□□□□ -0.92
USP46-203ENST00000502443 DNAAF4Q8WXU2 420 aa9.31□□□□□ -0.92
USP46-203ENST00000502443 SSH1Q8WYL5 1049 aa9.31□□□□□ -0.92
USP46-203ENST00000502443 BCL2L13Q9BXK5 485 aa9.31□□□□□ -0.92
USP46-203ENST00000502443 CWC25Q9NXE8 425 aaPredicted RBP9.31□□□□□ -0.92
USP46-203ENST00000502443 ZNF219Q9P2Y4 722 aaPredicted RBP9.31□□□□□ -0.92
USP46-203ENST00000502443 SLX4Q8IY92 1834 aa9.31□□□□□ -0.92
USP46-203ENST00000502443 RIC1Q4ADV7 1423 aa9.31□□□□□ -0.92
USP46-203ENST00000502443 ZBED9Q6R2W3 1325 aa9.31□□□□□ -0.92
USP46-203ENST00000502443 F6X3S4 739 aa9.3□□□□□ -0.92
USP46-203ENST00000502443 C21orf2O43822 256 aa9.3□□□□□ -0.92
USP46-203ENST00000502443 IGKV5-2P06315 115 aa9.3□□□□□ -0.92
USP46-203ENST00000502443 ALDH1B1P30837 517 aa9.3□□□□□ -0.92
USP46-203ENST00000502443 ALDH1L2Q3SY69 923 aa9.3□□□□□ -0.92
USP46-203ENST00000502443 MRPL50Q8N5N7 158 aaKnown RBP9.3□□□□□ -0.92
USP46-203ENST00000502443 ZBTB38Q8NAP3 1195 aaPredicted RBP9.3□□□□□ -0.92
USP46-203ENST00000502443 SMC4Q9NTJ3 1288 aa9.3□□□□□ -0.92
USP46-203ENST00000502443 NEURL1BA8MQ27 555 aa9.29□□□□□ -0.92
USP46-203ENST00000502443 IRS4O14654 1257 aaPredicted RBP9.29□□□□□ -0.92
USP46-203ENST00000502443 PCCAP05165 728 aaPredicted RBP9.29□□□□□ -0.92
USP46-203ENST00000502443 SLC4A10Q6U841 1118 aa9.29□□□□□ -0.92
USP46-203ENST00000502443 LINS1Q8NG48 757 aa9.29□□□□□ -0.92
USP46-203ENST00000502443 JARID2Q92833 1246 aaPredicted RBP9.29□□□□□ -0.92
USP46-203ENST00000502443 RBM17Q96I25 401 aaKnown RBP9.29□□□□□ -0.92
USP46-203ENST00000502443 LAMB2P55268 1798 aa9.29□□□□□ -0.92
USP46-203ENST00000502443 DDX60Q8IY21 1712 aaKnown RBP9.28□□□□□ -0.92
USP46-203ENST00000502443 HSP90B1P14625 803 aaKnown RBP9.28□□□□□ -0.92
USP46-203ENST00000502443 HOXA10P31260 410 aaPredicted RBP9.28□□□□□ -0.92
USP46-203ENST00000502443 GCKRQ14397 625 aa9.28□□□□□ -0.92
USP46-203ENST00000502443 CRAMP1Q96RY5 1269 aa9.28□□□□□ -0.92
USP46-203ENST00000502443 PTPRCP08575 1304 aa9.28□□□□□ -0.92
USP46-203ENST00000502443 PDE8AO60658 829 aa9.27□□□□□ -0.93
USP46-203ENST00000502443 RARSP54136 660 aaKnown RBP9.27□□□□□ -0.93
USP46-203ENST00000502443 RASSF7Q02833 373 aa9.27□□□□□ -0.93
USP46-203ENST00000502443 BEND3Q5T5X7 828 aa9.27□□□□□ -0.93
USP46-203ENST00000502443 SOGA3Q5TF21 947 aa9.27□□□□□ -0.93
USP46-203ENST00000502443 DDX46Q7L014 1031 aaKnown RBP9.27□□□□□ -0.93
USP46-203ENST00000502443 UBE3BQ7Z3V4 1068 aa9.27□□□□□ -0.93
USP46-203ENST00000502443 C7orf43Q8WVR3 580 aa9.27□□□□□ -0.93
USP46-203ENST00000502443 CDHR2Q9BYE9 1310 aa9.27□□□□□ -0.93
USP46-203ENST00000502443 SBF1O95248 1867 aa9.26□□□□□ -0.93
USP46-203ENST00000502443 TAF1P21675 1872 aa9.26□□□□□ -0.93
USP46-203ENST00000502443 H7C1W4 665 aa9.26□□□□□ -0.93
USP46-203ENST00000502443 PPEF1O14829 653 aaPredicted RBP9.26□□□□□ -0.93
USP46-203ENST00000502443 SF3B3Q15393 1217 aaKnown RBP9.26□□□□□ -0.93
USP46-203ENST00000502443 CCDC93Q567U6 631 aa9.26□□□□□ -0.93
USP46-203ENST00000502443 OLFM4Q6UX06 510 aa9.26□□□□□ -0.93
USP46-203ENST00000502443 SRCIN1Q9C0H9 1055 aa9.26□□□□□ -0.93
USP46-203ENST00000502443 NOB1Q9ULX3 412 aaKnown RBP9.26□□□□□ -0.93
USP46-203ENST00000502443 ABCC4O15439 1325 aa9.26□□□□□ -0.93
USP46-203ENST00000502443 FER1L6Q2WGJ9 1857 aa9.25□□□□□ -0.93
USP46-203ENST00000502443 CCDC88AQ3V6T2 1871 aa9.25□□□□□ -0.93
USP46-203ENST00000502443 NFKBIEO00221 500 aa9.25□□□□□ -0.93
USP46-203ENST00000502443 ALDH1L1O75891 902 aa9.25□□□□□ -0.93
USP46-203ENST00000502443 BBOX1O75936 387 aa9.25□□□□□ -0.93
USP46-203ENST00000502443 GRAPQ13588 217 aa9.25□□□□□ -0.93
USP46-203ENST00000502443 CCDC152Q4G0S7 254 aa9.25□□□□□ -0.93
USP46-203ENST00000502443 C9orf131Q5VYM1 1079 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms