RNA–Protein interactions for RNA: ENST00000498689.5

CSTF1-207, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 1 (best)

Gene CSTF1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-207ENST00000498689 USP31Q70CQ4 1352 aa7.14□□□□□ -1.27
CSTF1-207ENST00000498689 SMARCC1Q92922 1105 aaPredicted RBP7.14□□□□□ -1.27
CSTF1-207ENST00000498689 LTV1Q96GA3 475 aaPredicted RBP7.14□□□□□ -1.27
CSTF1-207ENST00000498689 GLIS2Q9BZE0 524 aaPredicted RBP7.14□□□□□ -1.27
CSTF1-207ENST00000498689 TJP1Q07157 1748 aa7.13□□□□□ -1.27
CSTF1-207ENST00000498689 HMGB2P26583 209 aaKnown RBP7.13□□□□□ -1.27
CSTF1-207ENST00000498689 TM4SF1P30408 202 aa7.13□□□□□ -1.27
CSTF1-207ENST00000498689 HUNKP57058 714 aa7.13□□□□□ -1.27
CSTF1-207ENST00000498689 ALYREFQ86V81 257 aaKnown RBP7.13□□□□□ -1.27
CSTF1-207ENST00000498689 SLC4A9Q96Q91 983 aa7.13□□□□□ -1.27
CSTF1-207ENST00000498689 CABP2Q9NPB3 220 aa7.13□□□□□ -1.27
CSTF1-207ENST00000498689 ASAP1Q9ULH1 1129 aa7.13□□□□□ -1.27
CSTF1-207ENST00000498689 SPTBN4Q9H254 2564 aa7.12□□□□□ -1.27
CSTF1-207ENST00000498689 PSEN1P49768 467 aa7.12□□□□□ -1.27
CSTF1-207ENST00000498689 PDCD7Q8N8D1 485 aaKnown RBP7.12□□□□□ -1.27
CSTF1-207ENST00000498689 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.12□□□□□ -1.27
CSTF1-207ENST00000498689 C5orf42Q9H799 3197 aa7.12□□□□□ -1.27
CSTF1-207ENST00000498689 KDM3BQ7LBC6 1761 aa7.12□□□□□ -1.27
CSTF1-207ENST00000498689 TCF20Q9UGU0 1960 aaKnown RBP7.11□□□□□ -1.27
CSTF1-207ENST00000498689 TTC21BQ7Z4L5 1316 aa7.11□□□□□ -1.27
CSTF1-207ENST00000498689 ITGAEP38570 1179 aa7.11□□□□□ -1.27
CSTF1-207ENST00000498689 ZNF622Q969S3 477 aaKnown RBP eCLIP7.11□□□□□ -1.27
CSTF1-207ENST00000498689 TMEM121BQ9BXQ6 578 aaPredicted RBP7.11□□□□□ -1.27
CSTF1-207ENST00000498689 CABP1Q9NZU7 370 aa7.11□□□□□ -1.27
CSTF1-207ENST00000498689 KDRP35968 1356 aa7.1□□□□□ -1.27
CSTF1-207ENST00000498689 CACNA1BQ00975 2339 aa7.1□□□□□ -1.27
CSTF1-207ENST00000498689 USP42Q9H9J4 1324 aaKnown RBP7.1□□□□□ -1.27
CSTF1-207ENST00000498689 H0YIN7 160 aa7.1□□□□□ -1.27
CSTF1-207ENST00000498689 RPS6KA4O75676 772 aa7.1□□□□□ -1.27
CSTF1-207ENST00000498689 SCNN1DP51172 638 aa7.1□□□□□ -1.27
CSTF1-207ENST00000498689 RGMBQ6NW40 437 aa7.1□□□□□ -1.27
CSTF1-207ENST00000498689 R3HDMLQ9H3Y0 253 aa7.1□□□□□ -1.27
CSTF1-207ENST00000498689 ZNF277Q9NRM2 450 aaPredicted RBP7.1□□□□□ -1.27
CSTF1-207ENST00000498689 CIZ1Q9ULV3 898 aaPredicted RBP7.1□□□□□ -1.27
CSTF1-207ENST00000498689 ZSWIM8A7E2V4 1837 aa7.1□□□□□ -1.27
CSTF1-207ENST00000498689 WTIPA6NIX2 430 aaPredicted RBP7.09□□□□□ -1.27
CSTF1-207ENST00000498689 TNFRSF10AO00220 468 aa7.09□□□□□ -1.27
CSTF1-207ENST00000498689 CYP27B1O15528 508 aa7.09□□□□□ -1.27
CSTF1-207ENST00000498689 INTS3Q68E01 1043 aaKnown RBP7.09□□□□□ -1.27
CSTF1-207ENST00000498689 OLFM4Q6UX06 510 aa7.09□□□□□ -1.27
CSTF1-207ENST00000498689 ANKRD13DQ6ZTN6 518 aa7.09□□□□□ -1.27
CSTF1-207ENST00000498689 GPC2Q8N158 579 aa7.09□□□□□ -1.27
CSTF1-207ENST00000498689 USHBP1Q8N6Y0 703 aa7.09□□□□□ -1.27
CSTF1-207ENST00000498689 GJA3Q9Y6H8 435 aa7.09□□□□□ -1.27
CSTF1-207ENST00000498689 ZFHX4Q86UP3 3567 aa7.08□□□□□ -1.28
CSTF1-207ENST00000498689 FZD9O00144 591 aa7.08□□□□□ -1.28
CSTF1-207ENST00000498689 GPR25O00155 361 aa7.08□□□□□ -1.28
CSTF1-207ENST00000498689 ZNF157P51786 506 aaPredicted RBP7.08□□□□□ -1.28
CSTF1-207ENST00000498689 EMP3P54852 163 aa7.08□□□□□ -1.28
CSTF1-207ENST00000498689 DPF3Q92784 378 aa7.08□□□□□ -1.28
CSTF1-207ENST00000498689 GUCD1Q96NT3 240 aa7.08□□□□□ -1.28
CSTF1-207ENST00000498689 KMT2BQ9UMN6 2715 aaPredicted RBP7.08□□□□□ -1.28
CSTF1-207ENST00000498689 SMG6Q86US8 1419 aaKnown RBP7.08□□□□□ -1.28
CSTF1-207ENST00000498689 RPTORQ8N122 1335 aa7.07□□□□□ -1.28
CSTF1-207ENST00000498689 PPEF1O14829 653 aaPredicted RBP7.07□□□□□ -1.28
CSTF1-207ENST00000498689 CHRM1P11229 460 aaPredicted RBP7.07□□□□□ -1.28
CSTF1-207ENST00000498689 MMRN1Q13201 1228 aa7.07□□□□□ -1.28
CSTF1-207ENST00000498689 NFIXQ14938 502 aa7.07□□□□□ -1.28
CSTF1-207ENST00000498689 SPNS2Q8IVW8 549 aa7.07□□□□□ -1.28
CSTF1-207ENST00000498689 ATG3Q9NT62 314 aa7.07□□□□□ -1.28
CSTF1-207ENST00000498689 SETXQ7Z333 2677 aaKnown RBP7.07□□□□□ -1.28
CSTF1-207ENST00000498689 TAF1P21675 1872 aa7.07□□□□□ -1.28
CSTF1-207ENST00000498689 ZDBF2Q9HCK1 2354 aa7.06□□□□□ -1.28
CSTF1-207ENST00000498689 CNTNAP4Q9C0A0 1308 aa7.06□□□□□ -1.28
CSTF1-207ENST00000498689 CD163L1Q9NR16 1453 aa7.06□□□□□ -1.28
CSTF1-207ENST00000498689 DNAH12Q6ZR08 3092 aa7.06□□□□□ -1.28
CSTF1-207ENST00000498689 XIRP2A4UGR9 3374 aa7.06□□□□□ -1.28
CSTF1-207ENST00000498689 A0A1W2PPC1 479 aa7.06□□□□□ -1.28
CSTF1-207ENST00000498689 G3V3G9 751 aa7.06□□□□□ -1.28
CSTF1-207ENST00000498689 SLC10A3P09131 477 aa7.06□□□□□ -1.28
CSTF1-207ENST00000498689 PDAP1Q13442 181 aaKnown RBP7.06□□□□□ -1.28
CSTF1-207ENST00000498689 RC3H1Q5TC82 1133 aaKnown RBP7.06□□□□□ -1.28
CSTF1-207ENST00000498689 USPL1Q5W0Q7 1092 aa7.06□□□□□ -1.28
CSTF1-207ENST00000498689 GPR153Q6NV75 609 aa7.06□□□□□ -1.28
CSTF1-207ENST00000498689 USP50Q70EL3 339 aaPredicted RBP7.06□□□□□ -1.28
CSTF1-207ENST00000498689 STAP2Q9UGK3 403 aa7.06□□□□□ -1.28
CSTF1-207ENST00000498689 DCHS1Q96JQ0 3298 aa7.06□□□□□ -1.28
CSTF1-207ENST00000498689 ZNF646O15015 1829 aaPredicted RBP7.06□□□□□ -1.28
CSTF1-207ENST00000498689 CFAP47Q6ZTR5 3102 aa7.05□□□□□ -1.28
CSTF1-207ENST00000498689 SERPINB2P05120 415 aa7.05□□□□□ -1.28
CSTF1-207ENST00000498689 LMOD1P29536 600 aaPredicted RBP7.05□□□□□ -1.28
CSTF1-207ENST00000498689 PRPF40BQ6NWY9 871 aaKnown RBP7.05□□□□□ -1.28
CSTF1-207ENST00000498689 OTOP1Q7RTM1 612 aa7.05□□□□□ -1.28
CSTF1-207ENST00000498689 SPOCK2Q92563 424 aa7.05□□□□□ -1.28
CSTF1-207ENST00000498689 CCDC102AQ96A19 550 aa7.05□□□□□ -1.28
CSTF1-207ENST00000498689 ARMC5Q96C12 935 aa7.05□□□□□ -1.28
CSTF1-207ENST00000498689 TRIM17Q9Y577 477 aa7.05□□□□□ -1.28
CSTF1-207ENST00000498689 PCDH11XQ9BZA7 1347 aa7.04□□□□□ -1.28
CSTF1-207ENST00000498689 PCDH11YQ9BZA8 1340 aa7.04□□□□□ -1.28
CSTF1-207ENST00000498689 UNC79Q9P2D8 2635 aa7.04□□□□□ -1.28
CSTF1-207ENST00000498689 FAM205CA6NFA0 338 aa7.04□□□□□ -1.28
CSTF1-207ENST00000498689 ZBTB7BO15156 539 aaPredicted RBP7.04□□□□□ -1.28
CSTF1-207ENST00000498689 FKTNO75072 461 aa7.04□□□□□ -1.28
CSTF1-207ENST00000498689 MYCP01106 439 aaPredicted RBP7.04□□□□□ -1.28
CSTF1-207ENST00000498689 CAP1Q01518 475 aa7.04□□□□□ -1.28
CSTF1-207ENST00000498689 NBPF6Q5VWK0 638 aa7.04□□□□□ -1.28
CSTF1-207ENST00000498689 COL26A1Q96A83 441 aa7.04□□□□□ -1.28
CSTF1-207ENST00000498689 NBPF4Q96M43 638 aa7.04□□□□□ -1.28
CSTF1-207ENST00000498689 LAMB1P07942 1786 aa7.03□□□□□ -1.28
CSTF1-207ENST00000498689 HIRAP54198 1017 aaPredicted RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms