RNA–Protein interactions for RNA: ENST00000498660.1

TUBA4A-210, Transcript of tubulin alpha 4a, humanhuman

TSL 3

Gene TUBA4A, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4A-210ENST00000498660 IGKV5-2P06315 115 aa10.98□□□□□ -0.65
TUBA4A-210ENST00000498660 HMGB2P26583 209 aaKnown RBP10.98□□□□□ -0.65
TUBA4A-210ENST00000498660 GCKRQ14397 625 aa10.98□□□□□ -0.65
TUBA4A-210ENST00000498660 HSP90AB3PQ58FF7 597 aa10.98□□□□□ -0.65
TUBA4A-210ENST00000498660 UTYO14607 1347 aa10.98□□□□□ -0.65
TUBA4A-210ENST00000498660 MAP3K15Q6ZN16 1313 aa10.98□□□□□ -0.65
TUBA4A-210ENST00000498660 COL15A1P39059 1388 aa10.98□□□□□ -0.65
TUBA4A-210ENST00000498660 C4AP0C0L4 1744 aa10.98□□□□□ -0.65
TUBA4A-210ENST00000498660 MSH5O43196 834 aa10.97□□□□□ -0.65
TUBA4A-210ENST00000498660 NBPF7P0C2Y1 421 aaPredicted RBP10.97□□□□□ -0.65
TUBA4A-210ENST00000498660 YBX3P16989 372 aaKnown RBP eCLIP10.97□□□□□ -0.657e-7■■■□□ 16.6
TUBA4A-210ENST00000498660 SIRT2Q8IXJ6 389 aa10.97□□□□□ -0.65
TUBA4A-210ENST00000498660 CWC25Q9NXE8 425 aaPredicted RBP10.97□□□□□ -0.65
TUBA4A-210ENST00000498660 ZBTB47Q9UFB7 747 aaPredicted RBP10.97□□□□□ -0.65
TUBA4A-210ENST00000498660 PDZRN3Q9UPQ7 1066 aa10.97□□□□□ -0.65
TUBA4A-210ENST00000498660 LAMB2P55268 1798 aa10.97□□□□□ -0.65
TUBA4A-210ENST00000498660 CEP350Q5VT06 3117 aa10.97□□□□□ -0.65
TUBA4A-210ENST00000498660 A0A087WZG4 1122 aa10.96□□□□□ -0.65
TUBA4A-210ENST00000498660 NUCB1Q02818 461 aa10.96□□□□□ -0.65
TUBA4A-210ENST00000498660 INTS5Q6P9B9 1019 aaKnown RBP10.96□□□□□ -0.65
TUBA4A-210ENST00000498660 DZIP3Q86Y13 1208 aaKnown RBP10.96□□□□□ -0.65
TUBA4A-210ENST00000498660 CCDC191Q8NCU4 936 aa10.96□□□□□ -0.65
TUBA4A-210ENST00000498660 LINC00116Q8NCU8 138 aa10.96□□□□□ -0.65
TUBA4A-210ENST00000498660 FLAD1Q8NFF5 587 aa10.96□□□□□ -0.65
TUBA4A-210ENST00000498660 CD2APQ9Y5K6 639 aa10.96□□□□□ -0.65
TUBA4A-210ENST00000498660 ERVV-1B6SEH8 477 aa10.95□□□□□ -0.66
TUBA4A-210ENST00000498660 ATP5J2-PTCD1G3V325 749 aa10.95□□□□□ -0.66
TUBA4A-210ENST00000498660 RGS3P49796 1198 aa10.95□□□□□ -0.66
TUBA4A-210ENST00000498660 EIF5P55010 431 aaKnown RBP10.95□□□□□ -0.66
TUBA4A-210ENST00000498660 ATP8B2P98198 1209 aa10.95□□□□□ -0.66
TUBA4A-210ENST00000498660 GIGYF2Q6Y7W6 1299 aaKnown RBP10.95□□□□□ -0.66
TUBA4A-210ENST00000498660 DCTPP1Q9H773 170 aa10.95□□□□□ -0.66
TUBA4A-210ENST00000498660 MYH3P11055 1940 aa10.94□□□□□ -0.66
TUBA4A-210ENST00000498660 UBR3Q6ZT12 1888 aa10.94□□□□□ -0.66
TUBA4A-210ENST00000498660 SRGAP3O43295 1099 aa10.94□□□□□ -0.66
TUBA4A-210ENST00000498660 TCIRG1Q13488 830 aa10.94□□□□□ -0.66
TUBA4A-210ENST00000498660 MTX1Q13505 466 aa10.94□□□□□ -0.66
TUBA4A-210ENST00000498660 RC3H1Q5TC82 1133 aaKnown RBP10.94□□□□□ -0.66
TUBA4A-210ENST00000498660 MSL1Q68DK7 614 aa10.94□□□□□ -0.66
TUBA4A-210ENST00000498660 CHD1LQ86WJ1 897 aa10.94□□□□□ -0.66
TUBA4A-210ENST00000498660 SUCLG2Q96I99 432 aa10.94□□□□□ -0.66
TUBA4A-210ENST00000498660 ISCA1Q9BUE6 129 aa10.94□□□□□ -0.66
TUBA4A-210ENST00000498660 ZNF652Q9Y2D9 606 aa10.94□□□□□ -0.66
TUBA4A-210ENST00000498660 PNMA6EA0A0J9YXQ4 647 aa10.93□□□□□ -0.66
TUBA4A-210ENST00000498660 TRIM28Q13263 835 aaKnown RBP10.93□□□□□ -0.66
TUBA4A-210ENST00000498660 POLA2Q14181 598 aa10.93□□□□□ -0.66
TUBA4A-210ENST00000498660 ANKRD45Q5TZF3 282 aa10.93□□□□□ -0.66
TUBA4A-210ENST00000498660 UBE3BQ7Z3V4 1068 aa10.93□□□□□ -0.66
TUBA4A-210ENST00000498660 PPP1R42Q7Z4L9 355 aa10.93□□□□□ -0.66
TUBA4A-210ENST00000498660 SSH3Q8TE77 659 aa10.93□□□□□ -0.66
TUBA4A-210ENST00000498660 RGL2O15211 777 aa10.92□□□□□ -0.66
TUBA4A-210ENST00000498660 GNPATO15228 680 aa10.92□□□□□ -0.66
TUBA4A-210ENST00000498660 HSP90AB4PQ58FF6 505 aa10.92□□□□□ -0.66
TUBA4A-210ENST00000498660 SKAP1Q86WV1 359 aa10.92□□□□□ -0.66
TUBA4A-210ENST00000498660 AK7Q96M32 723 aa10.92□□□□□ -0.66
TUBA4A-210ENST00000498660 LNPKQ9C0E8 428 aa10.92□□□□□ -0.66
TUBA4A-210ENST00000498660 BICC1Q9H694 974 aaKnown RBP10.92□□□□□ -0.66
TUBA4A-210ENST00000498660 TBC1D2BQ9UPU7 963 aa10.92□□□□□ -0.66
TUBA4A-210ENST00000498660 CAMTA2O94983 1202 aa10.91□□□□□ -0.66
TUBA4A-210ENST00000498660 PCCAP05165 728 aaPredicted RBP10.91□□□□□ -0.66
TUBA4A-210ENST00000498660 HLFQ16534 295 aa10.91□□□□□ -0.66
TUBA4A-210ENST00000498660 RTCBQ9Y3I0 505 aaKnown RBP10.91□□□□□ -0.66
TUBA4A-210ENST00000498660 DDX60Q8IY21 1712 aaKnown RBP10.91□□□□□ -0.66
TUBA4A-210ENST00000498660 CDHR2Q9BYE9 1310 aa10.9□□□□□ -0.66
TUBA4A-210ENST00000498660 H7C1W4 665 aa10.9□□□□□ -0.66
TUBA4A-210ENST00000498660 RAB11FIP3O75154 756 aa10.9□□□□□ -0.66
TUBA4A-210ENST00000498660 RPS6KA4O75676 772 aa10.9□□□□□ -0.66
TUBA4A-210ENST00000498660 GPTP24298 496 aa10.9□□□□□ -0.66
TUBA4A-210ENST00000498660 CASP7P55210 303 aa10.9□□□□□ -0.66
TUBA4A-210ENST00000498660 RABL6Q3YEC7 729 aaPredicted RBP10.9□□□□□ -0.66
TUBA4A-210ENST00000498660 PARP10Q53GL7 1025 aa10.9□□□□□ -0.66
TUBA4A-210ENST00000498660 NLRP10Q86W26 655 aa10.9□□□□□ -0.66
TUBA4A-210ENST00000498660 LRRCC1Q9C099 1032 aa10.9□□□□□ -0.66
TUBA4A-210ENST00000498660 EXOC6BQ9Y2D4 811 aa10.9□□□□□ -0.66
TUBA4A-210ENST00000498660 APBB1O00213 710 aa10.89□□□□□ -0.67
TUBA4A-210ENST00000498660 SURF6O75683 361 aaKnown RBP10.89□□□□□ -0.67
TUBA4A-210ENST00000498660 ADRA2BP18089 450 aa10.89□□□□□ -0.67
TUBA4A-210ENST00000498660 PDE4AP27815 886 aa10.89□□□□□ -0.67
TUBA4A-210ENST00000498660 OS9Q13438 667 aaPredicted RBP10.89□□□□□ -0.67
TUBA4A-210ENST00000498660 IFFO2Q5TF58 517 aa10.89□□□□□ -0.67
TUBA4A-210ENST00000498660 CLEC4GQ6UXB4 293 aa10.89□□□□□ -0.67
TUBA4A-210ENST00000498660 AMIGO3Q86WK7 504 aa10.89□□□□□ -0.67
TUBA4A-210ENST00000498660 ERC1Q8IUD2 1116 aa10.89□□□□□ -0.67
TUBA4A-210ENST00000498660 ZBTB38Q8NAP3 1195 aaPredicted RBP10.89□□□□□ -0.67
TUBA4A-210ENST00000498660 KAZALD1Q96I82 304 aa10.89□□□□□ -0.67
TUBA4A-210ENST00000498660 GPBP1L1Q9HC44 474 aaPredicted RBP10.89□□□□□ -0.67
TUBA4A-210ENST00000498660 UBN2Q6ZU65 1347 aa10.88□□□□□ -0.67
TUBA4A-210ENST00000498660 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.88□□□□□ -0.67
TUBA4A-210ENST00000498660 HSP90B1P14625 803 aaKnown RBP10.88□□□□□ -0.67
TUBA4A-210ENST00000498660 SSFA2P28290 1259 aa10.88□□□□□ -0.67
TUBA4A-210ENST00000498660 ZNF34Q8IZ26 560 aa10.88□□□□□ -0.67
TUBA4A-210ENST00000498660 KIF1BPQ96EK5 621 aa10.88□□□□□ -0.67
TUBA4A-210ENST00000498660 PLA2G12BQ9BX93 195 aa10.88□□□□□ -0.67
TUBA4A-210ENST00000498660 ZPR1O75312 459 aa10.87□□□□□ -0.67
TUBA4A-210ENST00000498660 FAM161AQ3B820 660 aa10.87□□□□□ -0.67
TUBA4A-210ENST00000498660 EPHA10Q5JZY3 1008 aa10.87□□□□□ -0.67
TUBA4A-210ENST00000498660 JARID2Q92833 1246 aaPredicted RBP10.87□□□□□ -0.67
TUBA4A-210ENST00000498660 NARFQ9UHQ1 456 aa10.87□□□□□ -0.67
TUBA4A-210ENST00000498660 TRMT112Q9UI30 125 aaKnown RBP10.87□□□□□ -0.67
TUBA4A-210ENST00000498660 NIP7Q9Y221 180 aaKnown RBP eCLIP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms