RNA–Protein interactions for RNA: ENST00000498579.5

ECM1-207, Transcript of extracellular matrix protein 1, humanhuman

TSL 3

Gene ECM1, Length 943 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-207ENST00000498579 VEGFAP15692 232 aaPredicted RBP24.4■■□□□ 1.5
ECM1-207ENST00000498579 FKBP4Q02790 459 aaKnown RBP eCLIP24.4■■□□□ 1.5
ECM1-207ENST00000498579 FSTL1Q12841 308 aa24.4■■□□□ 1.5
ECM1-207ENST00000498579 DUSP27Q5VZP5 1158 aa24.4■■□□□ 1.5
ECM1-207ENST00000498579 CC2D2BQ6DHV5 1058 aa24.4■■□□□ 1.5
ECM1-207ENST00000498579 RBM17Q96I25 401 aaKnown RBP24.4■■□□□ 1.5
ECM1-207ENST00000498579 HOXA10P31260 410 aaPredicted RBP24.39■■□□□ 1.49
ECM1-207ENST00000498579 GRIPAP1Q4V328 841 aa24.39■■□□□ 1.49
ECM1-207ENST00000498579 NLRP3Q96P20 1036 aa24.39■■□□□ 1.49
ECM1-207ENST00000498579 HYPKQ9NX55 129 aa24.39■■□□□ 1.49
ECM1-207ENST00000498579 TCIRG1Q13488 830 aa24.38■■□□□ 1.49
ECM1-207ENST00000498579 SBF1O95248 1867 aa24.37■■□□□ 1.49
ECM1-207ENST00000498579 APLP1P51693 650 aa24.37■■□□□ 1.49
ECM1-207ENST00000498579 PLBD2Q8NHP8 589 aa24.37■■□□□ 1.49
ECM1-207ENST00000498579 SLC10A5Q5PT55 438 aa24.36■■□□□ 1.49
ECM1-207ENST00000498579 CRAMP1Q96RY5 1269 aa24.36■■□□□ 1.49
ECM1-207ENST00000498579 TMX4Q9H1E5 349 aaPredicted RBP24.36■■□□□ 1.49
ECM1-207ENST00000498579 ARFGEF2Q9Y6D5 1785 aa24.36■■□□□ 1.49
ECM1-207ENST00000498579 SLX4Q8IY92 1834 aa24.35■■□□□ 1.49
ECM1-207ENST00000498579 TNRC6CQ9HCJ0 1690 aaKnown RBP24.35■■□□□ 1.49
ECM1-207ENST00000498579 CCDC27Q2M243 656 aa24.35■■□□□ 1.49
ECM1-207ENST00000498579 ANKRD13DQ6ZTN6 518 aa24.35■■□□□ 1.49
ECM1-207ENST00000498579 NLRP10Q86W26 655 aa24.35■■□□□ 1.49
ECM1-207ENST00000498579 SMC1BQ8NDV3 1235 aa24.35■■□□□ 1.49
ECM1-207ENST00000498579 MRS2Q9HD23 443 aa24.35■■□□□ 1.49
ECM1-207ENST00000498579 NUP98P52948 1817 aa24.35■■□□□ 1.49
ECM1-207ENST00000498579 NCBP3Q53F19 620 aaKnown RBP24.34■■□□□ 1.49
ECM1-207ENST00000498579 PSMD1Q99460 953 aa24.34■■□□□ 1.49
ECM1-207ENST00000498579 SH3TC1Q8TE82 1336 aa24.34■■□□□ 1.49
ECM1-207ENST00000498579 FER1L6Q2WGJ9 1857 aa24.33■■□□□ 1.49
ECM1-207ENST00000498579 TRMT112Q9UI30 125 aaKnown RBP24.33■■□□□ 1.49
ECM1-207ENST00000498579 CCDC184Q52MB2 194 aa24.32■■□□□ 1.48
ECM1-207ENST00000498579 ZNF277Q9NRM2 450 aaPredicted RBP24.32■■□□□ 1.48
ECM1-207ENST00000498579 PPEF1O14829 653 aaPredicted RBP24.31■■□□□ 1.48
ECM1-207ENST00000498579 GOLGA2Q08379 1002 aa24.31■■□□□ 1.48
ECM1-207ENST00000498579 TIAM2Q8IVF5 1701 aa24.3■■□□□ 1.48
ECM1-207ENST00000498579 IARSP41252 1262 aaKnown RBP24.3■■□□□ 1.48
ECM1-207ENST00000498579 SYNE4Q8N205 404 aa24.3■■□□□ 1.48
ECM1-207ENST00000498579 CCDC30Q5VVM6 783 aa24.29■■□□□ 1.48
ECM1-207ENST00000498579 OLFM4Q6UX06 510 aa24.29■■□□□ 1.48
ECM1-207ENST00000498579 IQCA1LA6NCM1 817 aa24.28■■□□□ 1.48
ECM1-207ENST00000498579 WWC1Q8IX03 1113 aa24.28■■□□□ 1.48
ECM1-207ENST00000498579 JDP2Q8WYK2 163 aa24.28■■□□□ 1.48
ECM1-207ENST00000498579 ISCA1Q9BUE6 129 aa24.28■■□□□ 1.48
ECM1-207ENST00000498579 ELL2O00472 640 aaPredicted RBP24.27■■□□□ 1.48
ECM1-207ENST00000498579 BBOX1O75936 387 aa24.27■■□□□ 1.48
ECM1-207ENST00000498579 TRIM28Q13263 835 aaKnown RBP24.27■■□□□ 1.48
ECM1-207ENST00000498579 C3orf67Q6ZVT6 689 aa24.27■■□□□ 1.48
ECM1-207ENST00000498579 DDX46Q7L014 1031 aaKnown RBP24.27■■□□□ 1.48
ECM1-207ENST00000498579 RIC3Q7Z5B4 369 aa24.27■■□□□ 1.48
ECM1-207ENST00000498579 IL16Q14005 1332 aa24.27■■□□□ 1.48
ECM1-207ENST00000498579 DDNO94850 711 aaPredicted RBP24.26■■□□□ 1.47
ECM1-207ENST00000498579 DDX58O95786 925 aaKnown RBP24.26■■□□□ 1.47
ECM1-207ENST00000498579 HCLS1P14317 486 aaPredicted RBP24.26■■□□□ 1.47
ECM1-207ENST00000498579 L3MBTL3Q96JM7 780 aaPredicted RBP24.26■■□□□ 1.47
ECM1-207ENST00000498579 ATP6V0A2Q9Y487 856 aa24.26■■□□□ 1.47
ECM1-207ENST00000498579 SNED1Q8TER0 1413 aa24.26■■□□□ 1.47
ECM1-207ENST00000498579 CEP350Q5VT06 3117 aa24.25■■□□□ 1.47
ECM1-207ENST00000498579 WDR90Q96KV7 1748 aa24.25■■□□□ 1.47
ECM1-207ENST00000498579 POTECB2RU33 542 aa24.25■■□□□ 1.47
ECM1-207ENST00000498579 HSP90B1P14625 803 aaKnown RBP24.25■■□□□ 1.47
ECM1-207ENST00000498579 C8orf58Q8NAV2 365 aa24.25■■□□□ 1.47
ECM1-207ENST00000498579 ABCC4O15439 1325 aa24.25■■□□□ 1.47
ECM1-207ENST00000498579 FZD9O00144 591 aa24.24■■□□□ 1.47
ECM1-207ENST00000498579 TMC4Q7Z404 712 aa24.24■■□□□ 1.47
ECM1-207ENST00000498579 VPS33BQ9H267 617 aa24.24■■□□□ 1.47
ECM1-207ENST00000498579 ATP5J2-PTCD1G3V325 749 aa24.23■■□□□ 1.47
ECM1-207ENST00000498579 GRAPQ13588 217 aa24.23■■□□□ 1.47
ECM1-207ENST00000498579 SUPT20HQ8NEM7 779 aa24.23■■□□□ 1.47
ECM1-207ENST00000498579 GRAPLQ8TC17 118 aaPredicted RBP24.23■■□□□ 1.47
ECM1-207ENST00000498579 CACNA1SQ13698 1873 aa24.23■■□□□ 1.47
ECM1-207ENST00000498579 DICER1Q9UPY3 1922 aaKnown RBP24.22■■□□□ 1.47
ECM1-207ENST00000498579 STK31Q9BXU1 1019 aa24.22■■□□□ 1.47
ECM1-207ENST00000498579 TCERG1O14776 1098 aaKnown RBP24.21■■□□□ 1.47
ECM1-207ENST00000498579 EIF6P56537 245 aaKnown RBP24.21■■□□□ 1.47
ECM1-207ENST00000498579 SP8Q8IXZ3 490 aa24.21■■□□□ 1.47
ECM1-207ENST00000498579 LARGE2Q8N3Y3 721 aa24.21■■□□□ 1.47
ECM1-207ENST00000498579 PHAXQ9H814 394 aaKnown RBP24.21■■□□□ 1.47
ECM1-207ENST00000498579 ZNF541Q9H0D2 1346 aa24.2■■□□□ 1.46
ECM1-207ENST00000498579 GPC2Q8N158 579 aa24.2■■□□□ 1.46
ECM1-207ENST00000498579 TSR2Q969E8 191 aaKnown RBP24.2■■□□□ 1.46
ECM1-207ENST00000498579 FAM89AQ96GI7 184 aa24.2■■□□□ 1.46
ECM1-207ENST00000498579 ANKRD36CQ5JPF3 1778 aa24.2■■□□□ 1.46
ECM1-207ENST00000498579 SF3B3Q15393 1217 aaKnown RBP24.19■■□□□ 1.46
ECM1-207ENST00000498579 WDR63Q8IWG1 891 aa24.19■■□□□ 1.46
ECM1-207ENST00000498579 TSPYL6Q8N831 410 aa24.19■■□□□ 1.46
ECM1-207ENST00000498579 ZBTB38Q8NAP3 1195 aaPredicted RBP24.19■■□□□ 1.46
ECM1-207ENST00000498579 CCDC191Q8NCU4 936 aa24.19■■□□□ 1.46
ECM1-207ENST00000498579 CCDC88AQ3V6T2 1871 aa24.19■■□□□ 1.46
ECM1-207ENST00000498579 IRS4O14654 1257 aaPredicted RBP24.18■■□□□ 1.46
ECM1-207ENST00000498579 TWISTNBQ3B726 338 aaPredicted RBP24.18■■□□□ 1.46
ECM1-207ENST00000498579 DPP8Q6V1X1 898 aaPredicted RBP24.18■■□□□ 1.46
ECM1-207ENST00000498579 NIM1KQ8IY84 436 aa24.18■■□□□ 1.46
ECM1-207ENST00000498579 RTFDC1Q9BY42 306 aaPredicted RBP24.18■■□□□ 1.46
ECM1-207ENST00000498579 HACL1Q9UJ83 578 aa24.18■■□□□ 1.46
ECM1-207ENST00000498579 PPIP5K2O43314 1243 aa24.17■■□□□ 1.46
ECM1-207ENST00000498579 CHADLQ6NUI6 762 aa24.17■■□□□ 1.46
ECM1-207ENST00000498579 LDHDQ86WU2 507 aa24.17■■□□□ 1.46
ECM1-207ENST00000498579 MPNDQ8N594 471 aa24.17■■□□□ 1.46
ECM1-207ENST00000498579 MYD88Q99836 296 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms