RNA–Protein interactions for RNA: ENST00000498500.1

THBS3-209, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 768 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-209ENST00000498500 THSD7BQ9C0I4 1608 aa15.99■□□□□ 0.15
THBS3-209ENST00000498500 MLLT1Q03111 559 aaPredicted RBP15.99■□□□□ 0.15
THBS3-209ENST00000498500 FMR1Q06787 632 aaKnown RBP eCLIP15.99■□□□□ 0.15
THBS3-209ENST00000498500 DDX10Q13206 875 aaKnown RBP15.99■□□□□ 0.15
THBS3-209ENST00000498500 CC2D2BQ6DHV5 1058 aa15.99■□□□□ 0.15
THBS3-209ENST00000498500 CYP4F22Q6NT55 531 aa15.99■□□□□ 0.15
THBS3-209ENST00000498500 MCM10Q7L590 875 aa15.99■□□□□ 0.15
THBS3-209ENST00000498500 RPGRQ92834 1020 aaKnown RBP15.99■□□□□ 0.15
THBS3-209ENST00000498500 CFAP53Q96M91 514 aa15.99■□□□□ 0.15
THBS3-209ENST00000498500 GPR101Q96P66 508 aaPredicted RBP15.99■□□□□ 0.15
THBS3-209ENST00000498500 NYXQ9GZU5 481 aa15.99■□□□□ 0.15
THBS3-209ENST00000498500 RSPH6AQ9H0K4 717 aa15.99■□□□□ 0.15
THBS3-209ENST00000498500 LAMB4A4D0S4 1761 aa15.98■□□□□ 0.15
THBS3-209ENST00000498500 EPS15P42566 896 aa15.98■□□□□ 0.15
THBS3-209ENST00000498500 NUTM1Q86Y26 1132 aa15.98■□□□□ 0.15
THBS3-209ENST00000498500 LARGE2Q8N3Y3 721 aa15.98■□□□□ 0.15
THBS3-209ENST00000498500 NGEFQ8N5V2 710 aa15.98■□□□□ 0.15
THBS3-209ENST00000498500 COL4A5P29400 1685 aa15.98■□□□□ 0.15
THBS3-209ENST00000498500 DLG5Q8TDM6 1919 aa15.98■□□□□ 0.15
THBS3-209ENST00000498500 CASP8AP2Q9UKL3 1982 aa15.97■□□□□ 0.15
THBS3-209ENST00000498500 SNED1Q8TER0 1413 aa15.97■□□□□ 0.15
THBS3-209ENST00000498500 SCNN1DP51172 638 aa15.97■□□□□ 0.15
THBS3-209ENST00000498500 USP50Q70EL3 339 aaPredicted RBP15.97■□□□□ 0.15
THBS3-209ENST00000498500 NUDCQ9Y266 331 aa15.97■□□□□ 0.15
THBS3-209ENST00000498500 TCERG1O14776 1098 aaKnown RBP15.96■□□□□ 0.15
THBS3-209ENST00000498500 DCTN1Q14203 1278 aa15.96■□□□□ 0.15
THBS3-209ENST00000498500 CRY2Q49AN0 593 aa15.96■□□□□ 0.15
THBS3-209ENST00000498500 GRIPAP1Q4V328 841 aa15.96■□□□□ 0.15
THBS3-209ENST00000498500 TSKSQ9UJT2 592 aa15.96■□□□□ 0.15
THBS3-209ENST00000498500 ABCC12Q96J65 1359 aa15.96■□□□□ 0.15
THBS3-209ENST00000498500 TRAF5O00463 557 aa15.95■□□□□ 0.14
THBS3-209ENST00000498500 CST9Q5W186 159 aa15.95■□□□□ 0.14
THBS3-209ENST00000498500 NIM1KQ8IY84 436 aa15.95■□□□□ 0.14
THBS3-209ENST00000498500 CFAP44Q96MT7 982 aa15.95■□□□□ 0.14
THBS3-209ENST00000498500 TLL2Q9Y6L7 1015 aa15.95■□□□□ 0.14
THBS3-209ENST00000498500 AOC2O75106 756 aa15.94■□□□□ 0.14
THBS3-209ENST00000498500 U2AF1L5P0DN76 240 aaPredicted RBP15.94■□□□□ 0.14
THBS3-209ENST00000498500 U2AF1Q01081 240 aaKnown RBP eCLIP15.94■□□□□ 0.14
THBS3-209ENST00000498500 TAF7Q15545 349 aaPredicted RBP15.94■□□□□ 0.14
THBS3-209ENST00000498500 RBM17Q96I25 401 aaKnown RBP15.94■□□□□ 0.14
THBS3-209ENST00000498500 ERVV-1B6SEH8 477 aa15.93■□□□□ 0.14
THBS3-209ENST00000498500 PPEF1O14829 653 aaPredicted RBP15.93■□□□□ 0.14
THBS3-209ENST00000498500 PPIP5K2O43314 1243 aa15.93■□□□□ 0.14
THBS3-209ENST00000498500 GPTP24298 496 aa15.93■□□□□ 0.14
THBS3-209ENST00000498500 HOXA10P31260 410 aaPredicted RBP15.93■□□□□ 0.14
THBS3-209ENST00000498500 MAP2K2P36507 400 aa15.93■□□□□ 0.14
THBS3-209ENST00000498500 RGS19P49795 217 aa15.93■□□□□ 0.14
THBS3-209ENST00000498500 RALBP1Q15311 655 aa15.93■□□□□ 0.14
THBS3-209ENST00000498500 KIF6Q6ZMV9 814 aa15.93■□□□□ 0.14
THBS3-209ENST00000498500 TMX4Q9H1E5 349 aaPredicted RBP15.93■□□□□ 0.14
THBS3-209ENST00000498500 MIS18AQ9NYP9 233 aa15.93■□□□□ 0.14
THBS3-209ENST00000498500 HTATSF1O43719 755 aaKnown RBP15.92■□□□□ 0.14
THBS3-209ENST00000498500 CRAMP1Q96RY5 1269 aa15.92■□□□□ 0.14
THBS3-209ENST00000498500 ADARB2Q9NS39 739 aaKnown RBP15.92■□□□□ 0.14
THBS3-209ENST00000498500 RRP7AQ9Y3A4 280 aaKnown RBP15.92■□□□□ 0.14
THBS3-209ENST00000498500 MAP3K15Q6ZN16 1313 aa15.92■□□□□ 0.14
THBS3-209ENST00000498500 CELF2O95319 508 aaKnown RBP15.91■□□□□ 0.14
THBS3-209ENST00000498500 GPRC5DQ9NZD1 345 aa15.91■□□□□ 0.14
THBS3-209ENST00000498500 CA12O43570 354 aa15.9■□□□□ 0.14
THBS3-209ENST00000498500 MYL6BP14649 208 aa15.9■□□□□ 0.14
THBS3-209ENST00000498500 AOC3Q16853 763 aa15.9■□□□□ 0.14
THBS3-209ENST00000498500 SUSD4Q5VX71 490 aa15.9■□□□□ 0.14
THBS3-209ENST00000498500 TTLL7Q6ZT98 887 aa15.9■□□□□ 0.14
THBS3-209ENST00000498500 SAPCD2Q86UD0 394 aa15.9■□□□□ 0.14
THBS3-209ENST00000498500 SLC51AQ86UW1 340 aa15.9■□□□□ 0.14
THBS3-209ENST00000498500 ZBTB3Q9H5J0 574 aa15.9■□□□□ 0.14
THBS3-209ENST00000498500 RIC1Q4ADV7 1423 aa15.9■□□□□ 0.14
THBS3-209ENST00000498500 MYBBP1AQ9BQG0 1328 aaKnown RBP15.9■□□□□ 0.14
THBS3-209ENST00000498500 KDM3BQ7LBC6 1761 aa15.9■□□□□ 0.14
THBS3-209ENST00000498500 IBTKQ9P2D0 1353 aaPredicted RBP15.89■□□□□ 0.13
THBS3-209ENST00000498500 GLIS2Q9BZE0 524 aaPredicted RBP15.89■□□□□ 0.13
THBS3-209ENST00000498500 MCOLN1Q9GZU1 580 aa15.89■□□□□ 0.13
THBS3-209ENST00000498500 ZNF408Q9H9D4 720 aa15.89■□□□□ 0.13
THBS3-209ENST00000498500 UBN2Q6ZU65 1347 aa15.89■□□□□ 0.13
THBS3-209ENST00000498500 CXCL9Q07325 125 aa15.88■□□□□ 0.13
THBS3-209ENST00000498500 NLRP3Q96P20 1036 aa15.88■□□□□ 0.13
THBS3-209ENST00000498500 VPS33BQ9H267 617 aa15.88■□□□□ 0.13
THBS3-209ENST00000498500 ZNRF3Q9ULT6 936 aa15.88■□□□□ 0.13
THBS3-209ENST00000498500 GMPSP49915 693 aaPredicted RBP15.87■□□□□ 0.13
THBS3-209ENST00000498500 C3orf67Q6ZVT6 689 aa15.87■□□□□ 0.13
THBS3-209ENST00000498500 PPP1R42Q7Z4L9 355 aa15.87■□□□□ 0.13
THBS3-209ENST00000498500 ZNF34Q8IZ26 560 aa15.87■□□□□ 0.13
THBS3-209ENST00000498500 SUPT20HQ8NEM7 779 aa15.87■□□□□ 0.13
THBS3-209ENST00000498500 PNISRQ8TF01 805 aaKnown RBP15.87■□□□□ 0.13
THBS3-209ENST00000498500 BCL2L13Q9BXK5 485 aa15.87■□□□□ 0.13
THBS3-209ENST00000498500 ATP6V0A2Q9Y487 856 aa15.87■□□□□ 0.13
THBS3-209ENST00000498500 POLR2AP24928 1970 aaKnown RBP15.86■□□□□ 0.13
THBS3-209ENST00000498500 NTSR2O95665 410 aa15.86■□□□□ 0.13
THBS3-209ENST00000498500 NEFMP07197 916 aa15.86■□□□□ 0.13
THBS3-209ENST00000498500 BRPF1P55201 1214 aaPredicted RBP15.86■□□□□ 0.13
THBS3-209ENST00000498500 DGKZQ13574 1117 aa15.86■□□□□ 0.13
THBS3-209ENST00000498500 CIAPIN1Q6FI81 312 aa15.86■□□□□ 0.13
THBS3-209ENST00000498500 HHIPL1Q96JK4 782 aa15.86■□□□□ 0.13
THBS3-209ENST00000498500 PLEKHF1Q96S99 279 aa15.86■□□□□ 0.13
THBS3-209ENST00000498500 PRKRIP1Q9H875 184 aaPredicted RBP15.86■□□□□ 0.13
THBS3-209ENST00000498500 LAMB2P55268 1798 aa15.85■□□□□ 0.13
THBS3-209ENST00000498500 EIF4A1P60842 406 aaKnown RBP15.85■□□□□ 0.13
THBS3-209ENST00000498500 GIGYF2Q6Y7W6 1299 aaKnown RBP15.85■□□□□ 0.13
THBS3-209ENST00000498500 PCDH10Q9P2E7 1040 aa15.85■□□□□ 0.13
THBS3-209ENST00000498500 PARP10Q53GL7 1025 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms