RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 PAXIP1Q6ZW49 1069 aaPredicted RBP18.57■□□□□ 0.56
CCDC58-207ENST00000498466 RPGRQ92834 1020 aaKnown RBP18.57■□□□□ 0.56
CCDC58-207ENST00000498466 ABHD8Q96I13 439 aa18.57■□□□□ 0.56
CCDC58-207ENST00000498466 ABCC12Q96J65 1359 aa18.56■□□□□ 0.56
CCDC58-207ENST00000498466 TAF7Q15545 349 aaPredicted RBP18.56■□□□□ 0.56
CCDC58-207ENST00000498466 SNED1Q8TER0 1413 aa18.56■□□□□ 0.56
CCDC58-207ENST00000498466 HTATSF1O43719 755 aaKnown RBP18.55■□□□□ 0.56
CCDC58-207ENST00000498466 GRM1Q13255 1194 aa18.55■□□□□ 0.56
CCDC58-207ENST00000498466 LARGE2Q8N3Y3 721 aa18.55■□□□□ 0.56
CCDC58-207ENST00000498466 BEGAINQ9BUH8 593 aa18.55■□□□□ 0.56
CCDC58-207ENST00000498466 MIS18AQ9NYP9 233 aa18.55■□□□□ 0.56
CCDC58-207ENST00000498466 ERVV-1B6SEH8 477 aa18.54■□□□□ 0.56
CCDC58-207ENST00000498466 EPS15P42566 896 aa18.54■□□□□ 0.56
CCDC58-207ENST00000498466 ECE1P42892 770 aa18.54■□□□□ 0.56
CCDC58-207ENST00000498466 SCNN1DP51172 638 aa18.54■□□□□ 0.56
CCDC58-207ENST00000498466 FMR1Q06787 632 aaKnown RBP eCLIP18.54■□□□□ 0.56
CCDC58-207ENST00000498466 KIF6Q6ZMV9 814 aa18.54■□□□□ 0.56
CCDC58-207ENST00000498466 CAPNS2Q96L46 248 aa18.54■□□□□ 0.56
CCDC58-207ENST00000498466 COL4A5P29400 1685 aa18.54■□□□□ 0.56
CCDC58-207ENST00000498466 TCERG1O14776 1098 aaKnown RBP18.53■□□□□ 0.56
CCDC58-207ENST00000498466 GPTP24298 496 aa18.53■□□□□ 0.56
CCDC58-207ENST00000498466 GRIPAP1Q4V328 841 aa18.53■□□□□ 0.56
CCDC58-207ENST00000498466 MAP3K15Q6ZN16 1313 aa18.52■□□□□ 0.56
CCDC58-207ENST00000498466 HOXA10P31260 410 aaPredicted RBP18.52■□□□□ 0.56
CCDC58-207ENST00000498466 FAM161AQ3B820 660 aa18.52■□□□□ 0.56
CCDC58-207ENST00000498466 CYP4F22Q6NT55 531 aa18.52■□□□□ 0.56
CCDC58-207ENST00000498466 USP50Q70EL3 339 aaPredicted RBP18.52■□□□□ 0.56
CCDC58-207ENST00000498466 RBM17Q96I25 401 aaKnown RBP18.52■□□□□ 0.56
CCDC58-207ENST00000498466 GPR101Q96P66 508 aaPredicted RBP18.52■□□□□ 0.56
CCDC58-207ENST00000498466 RRP7AQ9Y3A4 280 aaKnown RBP18.52■□□□□ 0.56
CCDC58-207ENST00000498466 PPEF1O14829 653 aaPredicted RBP18.51■□□□□ 0.55
CCDC58-207ENST00000498466 TTLL7Q6ZT98 887 aa18.51■□□□□ 0.55
CCDC58-207ENST00000498466 NIM1KQ8IY84 436 aa18.51■□□□□ 0.55
CCDC58-207ENST00000498466 LTBP1Q14766 1721 aa18.51■□□□□ 0.55
CCDC58-207ENST00000498466 TRAF5O00463 557 aa18.5■□□□□ 0.55
CCDC58-207ENST00000498466 MYL6BP14649 208 aa18.5■□□□□ 0.55
CCDC58-207ENST00000498466 PPP2R1AP30153 589 aa18.5■□□□□ 0.55
CCDC58-207ENST00000498466 SUSD4Q5VX71 490 aa18.5■□□□□ 0.55
CCDC58-207ENST00000498466 CST9Q5W186 159 aa18.5■□□□□ 0.55
CCDC58-207ENST00000498466 SLC51AQ86UW1 340 aa18.5■□□□□ 0.55
CCDC58-207ENST00000498466 ZBTB3Q9H5J0 574 aa18.5■□□□□ 0.55
CCDC58-207ENST00000498466 UBN2Q6ZU65 1347 aa18.49■□□□□ 0.55
CCDC58-207ENST00000498466 CCDC85CA6NKD9 419 aa18.49■□□□□ 0.55
CCDC58-207ENST00000498466 PPIP5K2O43314 1243 aa18.49■□□□□ 0.55
CCDC58-207ENST00000498466 PNISRQ8TF01 805 aaKnown RBP18.49■□□□□ 0.55
CCDC58-207ENST00000498466 CRAMP1Q96RY5 1269 aa18.49■□□□□ 0.55
CCDC58-207ENST00000498466 TMX4Q9H1E5 349 aaPredicted RBP18.49■□□□□ 0.55
CCDC58-207ENST00000498466 IBTKQ9P2D0 1353 aaPredicted RBP18.49■□□□□ 0.55
CCDC58-207ENST00000498466 LAMB4A4D0S4 1761 aa18.49■□□□□ 0.55
CCDC58-207ENST00000498466 RIC1Q4ADV7 1423 aa18.49■□□□□ 0.55
CCDC58-207ENST00000498466 NEFMP07197 916 aa18.48■□□□□ 0.55
CCDC58-207ENST00000498466 TLL2Q9Y6L7 1015 aa18.48■□□□□ 0.55
CCDC58-207ENST00000498466 AOC3Q16853 763 aa18.47■□□□□ 0.55
CCDC58-207ENST00000498466 ADARB2Q9NS39 739 aaKnown RBP18.47■□□□□ 0.55
CCDC58-207ENST00000498466 TSKSQ9UJT2 592 aa18.47■□□□□ 0.55
CCDC58-207ENST00000498466 THSD7BQ9C0I4 1608 aa18.47■□□□□ 0.55
CCDC58-207ENST00000498466 AOC2O75106 756 aa18.46■□□□□ 0.55
CCDC58-207ENST00000498466 SLC34A2O95436 690 aa18.46■□□□□ 0.55
CCDC58-207ENST00000498466 NTSR2O95665 410 aa18.46■□□□□ 0.55
CCDC58-207ENST00000498466 EIF4A1P60842 406 aaKnown RBP18.46■□□□□ 0.55
CCDC58-207ENST00000498466 C3orf67Q6ZVT6 689 aa18.46■□□□□ 0.55
CCDC58-207ENST00000498466 PPP1R42Q7Z4L9 355 aa18.46■□□□□ 0.55
CCDC58-207ENST00000498466 ZNF34Q8IZ26 560 aa18.46■□□□□ 0.55
CCDC58-207ENST00000498466 GPRC5DQ9NZD1 345 aa18.46■□□□□ 0.55
CCDC58-207ENST00000498466 MAP2K2P36507 400 aa18.45■□□□□ 0.54
CCDC58-207ENST00000498466 MLLT1Q03111 559 aaPredicted RBP18.45■□□□□ 0.54
CCDC58-207ENST00000498466 NLRP3Q96P20 1036 aa18.45■□□□□ 0.54
CCDC58-207ENST00000498466 NUP98P52948 1817 aa18.44■□□□□ 0.54
CCDC58-207ENST00000498466 CELF2O95319 508 aaKnown RBP18.44■□□□□ 0.54
CCDC58-207ENST00000498466 GIGYF2Q6Y7W6 1299 aaKnown RBP18.44■□□□□ 0.54
CCDC58-207ENST00000498466 VPS33BQ9H267 617 aa18.44■□□□□ 0.54
CCDC58-207ENST00000498466 ATP6V0A2Q9Y487 856 aa18.44■□□□□ 0.54
CCDC58-207ENST00000498466 CXCL9Q07325 125 aa18.43■□□□□ 0.54
CCDC58-207ENST00000498466 PARP10Q53GL7 1025 aa18.43■□□□□ 0.54
CCDC58-207ENST00000498466 SAPCD2Q86UD0 394 aa18.43■□□□□ 0.54
CCDC58-207ENST00000498466 SUPT20HQ8NEM7 779 aa18.43■□□□□ 0.54
CCDC58-207ENST00000498466 ZNRF3Q9ULT6 936 aa18.43■□□□□ 0.54
CCDC58-207ENST00000498466 GMPSP49915 693 aaPredicted RBP18.42■□□□□ 0.54
CCDC58-207ENST00000498466 THUMPD2Q9BTF0 503 aaKnown RBP18.42■□□□□ 0.54
CCDC58-207ENST00000498466 GLIS2Q9BZE0 524 aaPredicted RBP18.42■□□□□ 0.54
CCDC58-207ENST00000498466 KDM3BQ7LBC6 1761 aa18.42■□□□□ 0.54
CCDC58-207ENST00000498466 CA12O43570 354 aa18.41■□□□□ 0.54
CCDC58-207ENST00000498466 DPP8Q6V1X1 898 aaPredicted RBP18.41■□□□□ 0.54
CCDC58-207ENST00000498466 CFAP44Q96MT7 982 aa18.41■□□□□ 0.54
CCDC58-207ENST00000498466 UTP14AQ9BVJ6 771 aaKnown RBP18.41■□□□□ 0.54
CCDC58-207ENST00000498466 BCL2L13Q9BXK5 485 aa18.41■□□□□ 0.54
CCDC58-207ENST00000498466 ZNF408Q9H9D4 720 aa18.41■□□□□ 0.54
CCDC58-207ENST00000498466 ABCC4O15439 1325 aa18.41■□□□□ 0.54
CCDC58-207ENST00000498466 ERBB4Q15303 1308 aa18.41■□□□□ 0.54
CCDC58-207ENST00000498466 TRPM7Q96QT4 1865 aa18.41■□□□□ 0.54
CCDC58-207ENST00000498466 CIAPIN1Q6FI81 312 aa18.4■□□□□ 0.54
CCDC58-207ENST00000498466 RTFDC1Q9BY42 306 aaPredicted RBP18.4■□□□□ 0.54
CCDC58-207ENST00000498466 RGS19P49795 217 aa18.39■□□□□ 0.53
CCDC58-207ENST00000498466 NFE2L2Q16236 605 aa18.39■□□□□ 0.53
CCDC58-207ENST00000498466 SLC10A5Q5PT55 438 aa18.39■□□□□ 0.53
CCDC58-207ENST00000498466 HHIPL1Q96JK4 782 aa18.39■□□□□ 0.53
CCDC58-207ENST00000498466 BBOX1O75936 387 aa18.38■□□□□ 0.53
CCDC58-207ENST00000498466 RAD17O75943 681 aa18.38■□□□□ 0.53
CCDC58-207ENST00000498466 BRPF1P55201 1214 aaPredicted RBP18.38■□□□□ 0.53
CCDC58-207ENST00000498466 TNIP1Q15025 636 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms