RNA–Protein interactions for RNA: ENST00000498366.5

HDAC10-221, Transcript of histone deacetylase 10, humanhuman

TSL 5

Gene HDAC10, Length 2,153 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC10-221ENST00000498366 IBTKQ9P2D0 1353 aaPredicted RBP23.26■■□□□ 1.31
HDAC10-221ENST00000498366 DDRGK1Q96HY6 314 aa23.25■■□□□ 1.31
HDAC10-221ENST00000498366 PHF14O94880 888 aa23.25■■□□□ 1.31
HDAC10-221ENST00000498366 HSP90AB3PQ58FF7 597 aa23.24■■□□□ 1.31
HDAC10-221ENST00000498366 SKAP1Q86WV1 359 aa23.24■■□□□ 1.31
HDAC10-221ENST00000498366 KAZALD1Q96I82 304 aa23.24■■□□□ 1.31
HDAC10-221ENST00000498366 SUCLG2Q96I99 432 aa23.24■■□□□ 1.31
HDAC10-221ENST00000498366 BCORQ6W2J9 1755 aa23.24■■□□□ 1.31
HDAC10-221ENST00000498366 UBR3Q6ZT12 1888 aa23.23■■□□□ 1.31
HDAC10-221ENST00000498366 PNMA6EA0A0J9YXQ4 647 aa23.23■■□□□ 1.31
HDAC10-221ENST00000498366 TRIM28Q13263 835 aaKnown RBP23.23■■□□□ 1.31
HDAC10-221ENST00000498366 ARHGEF1Q92888 912 aaKnown RBP23.23■■□□□ 1.31
HDAC10-221ENST00000498366 H7C1W4 665 aa23.22■■□□□ 1.31
HDAC10-221ENST00000498366 NLRP10Q86W26 655 aa23.22■■□□□ 1.31
HDAC10-221ENST00000498366 PKNOX2Q96KN3 472 aa23.22■■□□□ 1.31
HDAC10-221ENST00000498366 SRP68Q9UHB9 627 aaKnown RBP23.22■■□□□ 1.31
HDAC10-221ENST00000498366 CASP7P55210 303 aa23.21■■□□□ 1.31
HDAC10-221ENST00000498366 ATP8B2P98198 1209 aa23.21■■□□□ 1.31
HDAC10-221ENST00000498366 ZNF34Q8IZ26 560 aa23.21■■□□□ 1.31
HDAC10-221ENST00000498366 UBN2Q6ZU65 1347 aa23.21■■□□□ 1.31
HDAC10-221ENST00000498366 C4AP0C0L4 1744 aa23.21■■□□□ 1.31
HDAC10-221ENST00000498366 EN1Q05925 392 aaPredicted RBP23.21■■□□□ 1.31
HDAC10-221ENST00000498366 TRAPPC3LQ5T215 181 aa23.21■■□□□ 1.31
HDAC10-221ENST00000498366 USPL1Q5W0Q7 1092 aa23.21■■□□□ 1.31
HDAC10-221ENST00000498366 BICC1Q9H694 974 aaKnown RBP23.21■■□□□ 1.31
HDAC10-221ENST00000498366 NARFQ9UHQ1 456 aa23.21■■□□□ 1.31
HDAC10-221ENST00000498366 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.2■■□□□ 1.3
HDAC10-221ENST00000498366 PPP1R42Q7Z4L9 355 aa23.2■■□□□ 1.3
HDAC10-221ENST00000498366 SMC5Q8IY18 1101 aa23.2■■□□□ 1.3
HDAC10-221ENST00000498366 HDAC5Q9UQL6 1122 aa23.2■■□□□ 1.3
HDAC10-221ENST00000498366 RGPD3A6NKT7 1758 aaPredicted RBP23.2■■□□□ 1.3
HDAC10-221ENST00000498366 RGPD4Q7Z3J3 1758 aa23.2■■□□□ 1.3
HDAC10-221ENST00000498366 EPHA10Q5JZY3 1008 aa23.2■■□□□ 1.3
HDAC10-221ENST00000498366 SCN7AQ01118 1682 aa23.19■■□□□ 1.3
HDAC10-221ENST00000498366 ZPR1O75312 459 aa23.19■■□□□ 1.3
HDAC10-221ENST00000498366 HMMRO75330 724 aa23.19■■□□□ 1.3
HDAC10-221ENST00000498366 FAM89AQ96GI7 184 aa23.19■■□□□ 1.3
HDAC10-221ENST00000498366 ZNF652Q9Y2D9 606 aa23.19■■□□□ 1.3
HDAC10-221ENST00000498366 SRGAP3O43295 1099 aa23.18■■□□□ 1.3
HDAC10-221ENST00000498366 RFC4P35249 363 aa23.18■■□□□ 1.3
HDAC10-221ENST00000498366 EZH2Q15910 746 aaKnown RBP23.18■■□□□ 1.3
HDAC10-221ENST00000498366 CLEC4GQ6UXB4 293 aa23.18■■□□□ 1.3
HDAC10-221ENST00000498366 BCL2L12Q9HB09 334 aa23.18■■□□□ 1.3
HDAC10-221ENST00000498366 NIP7Q9Y221 180 aaKnown RBP eCLIP23.18■■□□□ 1.3
HDAC10-221ENST00000498366 ZNF827Q17R98 1081 aa23.18■■□□□ 1.3
HDAC10-221ENST00000498366 SYNE4Q8N205 404 aa23.17■■□□□ 1.3
HDAC10-221ENST00000498366 CAMKK2Q96RR4 588 aa23.17■■□□□ 1.3
HDAC10-221ENST00000498366 ZBTB38Q8NAP3 1195 aaPredicted RBP23.17■■□□□ 1.3
HDAC10-221ENST00000498366 DCTPP1Q9H773 170 aa23.17■■□□□ 1.3
HDAC10-221ENST00000498366 FAM177BA6PVY3 158 aa23.16■■□□□ 1.3
HDAC10-221ENST00000498366 SF3B2Q13435 895 aaKnown RBP23.16■■□□□ 1.3
HDAC10-221ENST00000498366 SSH3Q8TE77 659 aa23.16■■□□□ 1.3
HDAC10-221ENST00000498366 GCC1Q96CN9 775 aa23.16■■□□□ 1.3
HDAC10-221ENST00000498366 TRMT112Q9UI30 125 aaKnown RBP23.16■■□□□ 1.3
HDAC10-221ENST00000498366 USP42Q9H9J4 1324 aaKnown RBP23.16■■□□□ 1.3
HDAC10-221ENST00000498366 PCCAP05165 728 aaPredicted RBP23.16■■□□□ 1.3
HDAC10-221ENST00000498366 ADRA2BP18089 450 aa23.16■■□□□ 1.3
HDAC10-221ENST00000498366 MTX1Q13505 466 aa23.16■■□□□ 1.3
HDAC10-221ENST00000498366 SUSD4Q5VX71 490 aa23.16■■□□□ 1.3
HDAC10-221ENST00000498366 PDZRN3Q9UPQ7 1066 aa23.16■■□□□ 1.3
HDAC10-221ENST00000498366 HMGB2P26583 209 aaKnown RBP23.15■■□□□ 1.3
HDAC10-221ENST00000498366 BICDL1Q6ZP65 573 aa23.15■■□□□ 1.3
HDAC10-221ENST00000498366 DEFB132Q7Z7B7 95 aa23.15■■□□□ 1.3
HDAC10-221ENST00000498366 AKT1S1Q96B36 256 aa23.15■■□□□ 1.3
HDAC10-221ENST00000498366 TFCP2L1Q9NZI6 479 aa23.15■■□□□ 1.3
HDAC10-221ENST00000498366 SSFA2P28290 1259 aa23.14■■□□□ 1.3
HDAC10-221ENST00000498366 TBC1D9BQ66K14 1250 aa23.14■■□□□ 1.3
HDAC10-221ENST00000498366 POLA2Q14181 598 aa23.14■■□□□ 1.29
HDAC10-221ENST00000498366 FOXO4P98177 505 aa23.13■■□□□ 1.29
HDAC10-221ENST00000498366 EXOC6BQ9Y2D4 811 aa23.13■■□□□ 1.29
HDAC10-221ENST00000498366 APBB1O00213 710 aa23.13■■□□□ 1.29
HDAC10-221ENST00000498366 BAG6P46379 1132 aa23.13■■□□□ 1.29
HDAC10-221ENST00000498366 PARP10Q53GL7 1025 aa23.13■■□□□ 1.29
HDAC10-221ENST00000498366 RGL2O15211 777 aa23.12■■□□□ 1.29
HDAC10-221ENST00000498366 RABL6Q3YEC7 729 aaPredicted RBP23.12■■□□□ 1.29
HDAC10-221ENST00000498366 ANKRD45Q5TZF3 282 aa23.12■■□□□ 1.29
HDAC10-221ENST00000498366 TUBGCP6Q96RT7 1819 aa23.12■■□□□ 1.29
HDAC10-221ENST00000498366 LMBR1LQ6UX01 489 aa23.11■■□□□ 1.29
HDAC10-221ENST00000498366 UTP14AQ9BVJ6 771 aaKnown RBP23.11■■□□□ 1.29
HDAC10-221ENST00000498366 RGS3P49796 1198 aa23.1■■□□□ 1.29
HDAC10-221ENST00000498366 NUCB1Q02818 461 aa23.1■■□□□ 1.29
HDAC10-221ENST00000498366 CDHR2Q9BYE9 1310 aa23.1■■□□□ 1.29
HDAC10-221ENST00000498366 IRS4O14654 1257 aaPredicted RBP23.1■■□□□ 1.29
HDAC10-221ENST00000498366 LNPKQ9C0E8 428 aa23.1■■□□□ 1.29
HDAC10-221ENST00000498366 SURF6O75683 361 aaKnown RBP23.09■■□□□ 1.29
HDAC10-221ENST00000498366 NTSR2O95665 410 aa23.09■■□□□ 1.29
HDAC10-221ENST00000498366 NUTM1Q86Y26 1132 aa23.09■■□□□ 1.29
HDAC10-221ENST00000498366 PA2G4Q9UQ80 394 aaKnown RBP23.09■■□□□ 1.29
HDAC10-221ENST00000498366 CHMP3Q9Y3E7 222 aa23.09■■□□□ 1.29
HDAC10-221ENST00000498366 SH3TC1Q8TE82 1336 aa23.09■■□□□ 1.29
HDAC10-221ENST00000498366 CHD1LQ86WJ1 897 aa23.08■■□□□ 1.29
HDAC10-221ENST00000498366 SETDB2Q96T68 719 aa23.08■■□□□ 1.29
HDAC10-221ENST00000498366 KLHDC4Q8TBB5 520 aa23.08■■□□□ 1.29
HDAC10-221ENST00000498366 GYS1P13807 737 aa23.07■■□□□ 1.28
HDAC10-221ENST00000498366 COL23A1Q86Y22 540 aaPredicted RBP23.07■■□□□ 1.28
HDAC10-221ENST00000498366 PLA2G12BQ9BX93 195 aa23.07■■□□□ 1.28
HDAC10-221ENST00000498366 CCDC85AQ96PX6 553 aaPredicted RBP23.07■■□□□ 1.28
HDAC10-221ENST00000498366 HCLS1P14317 486 aaPredicted RBP23.06■■□□□ 1.28
HDAC10-221ENST00000498366 MYH3P11055 1940 aa23.06■■□□□ 1.28
HDAC10-221ENST00000498366 SMARCA5O60264 1052 aaPredicted RBP23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 134.5 ms